RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W RVS161P25343 265 aaKnown RBP0.96□□□□□ -2.26
SMC1YFL008W CDC50P25656 391 aa0.96□□□□□ -2.26
SMC1YFL008W DEG1P31115 442 aaKnown RBP0.96□□□□□ -2.26
SMC1YFL008W SSE1P32589 693 aaKnown RBP0.96□□□□□ -2.26
SMC1YFL008W VAM7P32912 316 aa0.96□□□□□ -2.26
SMC1YFL008W PAD1P33751 242 aaKnown RBP RIP-Chip data0.96□□□□□ -2.26not detected
SMC1YFL008W MRPL10P36520 322 aa0.96□□□□□ -2.26
SMC1YFL008W SMP1P38128 452 aa0.96□□□□□ -2.26
SMC1YFL008W OM14P38325 134 aa0.96□□□□□ -2.26
SMC1YFL008W NDT80P38830 627 aa0.96□□□□□ -2.26
SMC1YFL008W PDS1P40316 373 aaPredicted RBP0.96□□□□□ -2.26
SMC1YFL008W ELP2P42935 788 aa0.96□□□□□ -2.26
SMC1YFL008W GCN20P43535 752 aaKnown RBP0.96□□□□□ -2.26
SMC1YFL008W YML6P51998 286 aa0.96□□□□□ -2.26
SMC1YFL008W CGR1P53188 120 aa0.96□□□□□ -2.26
SMC1YFL008W EFM5P53200 248 aaKnown RBP0.96□□□□□ -2.26
SMC1YFL008W MAL13P53338 473 aa0.96□□□□□ -2.26
SMC1YFL008W ACT1P60010 375 aaKnown RBP0.96□□□□□ -2.26
SMC1YFL008W RMI1Q02685 241 aa0.96□□□□□ -2.26
SMC1YFL008W YET2Q04210 160 aa0.96□□□□□ -2.26
SMC1YFL008W YMR027WQ04371 470 aa0.96□□□□□ -2.26
SMC1YFL008W DIS3Q08162 1001 aaKnown RBP0.96□□□□□ -2.26
SMC1YFL008W SMC5Q08204 1093 aa0.96□□□□□ -2.26
SMC1YFL008W MED2Q12124 431 aa0.96□□□□□ -2.26
SMC1YFL008W TIR4Q12218 487 aaPredicted RBP0.96□□□□□ -2.26
SMC1YFL008W CEX1Q12453 761 aa0.96□□□□□ -2.26
SMC1YFL008W AFI1Q99222 893 aa0.96□□□□□ -2.26
SMC1YFL008W ARG4P04076 463 aaPredicted RBP0.96□□□□□ -2.26
SMC1YFL008W GCD2P12754 651 aaPredicted RBP0.96□□□□□ -2.26
SMC1YFL008W VPS3P23643 1011 aa0.96□□□□□ -2.26
SMC1YFL008W KRR1P25586 316 aaPredicted RBP0.96□□□□□ -2.26
SMC1YFL008W RPB9P27999 122 aa0.96□□□□□ -2.26
SMC1YFL008W VPH2P32341 215 aa0.96□□□□□ -2.26
SMC1YFL008W SRB4P32569 687 aa0.96□□□□□ -2.26
SMC1YFL008W COY1P34237 679 aa0.96□□□□□ -2.26
SMC1YFL008W HCS1P34243 683 aa0.96□□□□□ -2.26
SMC1YFL008W MTW1P39731 289 aa0.96□□□□□ -2.26
SMC1YFL008W YIL001WP40560 513 aa0.96□□□□□ -2.26
SMC1YFL008W KEL2P50090 882 aa0.96□□□□□ -2.26
SMC1YFL008W MRM2P53123 320 aa0.96□□□□□ -2.26
SMC1YFL008W CRH1P53301 507 aa0.96□□□□□ -2.26
SMC1YFL008W EGD1Q02642 157 aaKnown RBP0.96□□□□□ -2.26
SMC1YFL008W GRX3Q03835 250 aa0.96□□□□□ -2.26
SMC1YFL008W SPC24Q04477 213 aa0.96□□□□□ -2.26
SMC1YFL008W YDL144CQ07589 356 aa0.96□□□□□ -2.26
SMC1YFL008W ABP140Q08641 628 aaKnown RBP0.96□□□□□ -2.26
SMC1YFL008W APC5Q08683 685 aa0.96□□□□□ -2.26
SMC1YFL008W SGT2Q12118 346 aaKnown RBP0.96□□□□□ -2.26
SMC1YFL008W YDR018CQ12185 396 aa0.96□□□□□ -2.26
SMC1YFL008W PDR18P53756 1333 aa0.96□□□□□ -2.26
SMC1YFL008W CDC8P00572 216 aa0.96□□□□□ -2.26
SMC1YFL008W GRR1P24814 1151 aa0.96□□□□□ -2.26
SMC1YFL008W POP5P28005 173 aa0.96□□□□□ -2.26
SMC1YFL008W CYS4P32582 507 aaKnown RBP0.96□□□□□ -2.26
SMC1YFL008W YKL063CP35725 167 aa0.96□□□□□ -2.26
SMC1YFL008W MCR1P36060 302 aaKnown RBP0.96□□□□□ -2.26
SMC1YFL008W SHE1P38200 338 aa0.96□□□□□ -2.26
SMC1YFL008W FZO1P38297 855 aa0.96□□□□□ -2.26
SMC1YFL008W OTU2P38747 307 aaKnown RBP0.96□□□□□ -2.26
SMC1YFL008W YHR122WP38829 231 aa0.96□□□□□ -2.26
SMC1YFL008W FHL1P39521 936 aa0.96□□□□□ -2.26
SMC1YFL008W YER137CP40083 148 aaKnown RBP0.96□□□□□ -2.26
SMC1YFL008W RRG9P40156 214 aa0.96□□□□□ -2.26
SMC1YFL008W ARF3P40994 183 aaRIP-Chip data0.96□□□□□ -2.26not detected
SMC1YFL008W LCB3P47013 409 aa0.96□□□□□ -2.26
SMC1YFL008W RBL2P48606 106 aaKnown RBP0.96□□□□□ -2.26
SMC1YFL008W VHT1P53241 593 aa0.96□□□□□ -2.26
SMC1YFL008W HAL1Q01766 294 aa0.96□□□□□ -2.26
SMC1YFL008W SPC19Q03954 165 aa0.96□□□□□ -2.26
SMC1YFL008W STE23Q06010 1027 aa0.96□□□□□ -2.26
SMC1YFL008W YLH47Q06493 454 aa0.96□□□□□ -2.26
SMC1YFL008W LOA1Q06508 300 aa0.96□□□□□ -2.26
SMC1YFL008W GPM3Q12326 303 aa0.96□□□□□ -2.26
SMC1YFL008W HSP42Q12329 375 aa0.96□□□□□ -2.26
SMC1YFL008W MTR10Q99189 972 aa0.96□□□□□ -2.26
SMC1YFL008W DET1Q99288 334 aaKnown RBP0.96□□□□□ -2.26
SMC1YFL008W HHF1P02309 103 aaKnown RBP0.95□□□□□ -2.26
SMC1YFL008W OPI3P05375 206 aa0.95□□□□□ -2.26
SMC1YFL008W RPL22AP05749 121 aaKnown RBP0.95□□□□□ -2.26
SMC1YFL008W PET494P07390 489 aaPredicted RBP0.95□□□□□ -2.26
SMC1YFL008W RPO26P20435 155 aa0.95□□□□□ -2.26
SMC1YFL008W PDC2P32896 925 aa0.95□□□□□ -2.26
SMC1YFL008W NUF2P33895 451 aa0.95□□□□□ -2.26
SMC1YFL008W VPS21P36017 210 aaKnown RBP0.95□□□□□ -2.26
SMC1YFL008W JNM1P36224 373 aa0.95□□□□□ -2.26
SMC1YFL008W YSW1P38280 609 aa0.95□□□□□ -2.26
SMC1YFL008W POP7P38291 140 aa0.95□□□□□ -2.26
SMC1YFL008W TRM5P38793 499 aa0.95□□□□□ -2.26
SMC1YFL008W RCY1P39531 840 aa0.95□□□□□ -2.26
SMC1YFL008W SSO2P39926 295 aa0.95□□□□□ -2.26
SMC1YFL008W RTR1P40084 226 aaPredicted RBP0.95□□□□□ -2.26
SMC1YFL008W SSN8P47821 323 aa0.95□□□□□ -2.26
SMC1YFL008W KAP114P53067 1004 aa0.95□□□□□ -2.26
SMC1YFL008W MNP1P53163 194 aaPredicted RBP0.95□□□□□ -2.26
SMC1YFL008W YNL040WP53960 456 aaPredicted RBP0.95□□□□□ -2.26
SMC1YFL008W SPR6Q01684 191 aa0.95□□□□□ -2.26
SMC1YFL008W RRP45Q05636 305 aaKnown RBP0.95□□□□□ -2.26
SMC1YFL008W NSE1Q07913 336 aa0.95□□□□□ -2.26
SMC1YFL008W ATP16Q12165 160 aa0.95□□□□□ -2.26
SMC1YFL008W MSH5Q12175 901 aa0.95□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms