RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C MRPL6P32904 214 aa5.27□□□□□ -1.57
VPS72YDR485C ECM15P35195 104 aa5.27□□□□□ -1.57
VPS72YDR485C MTW1P39731 289 aa5.27□□□□□ -1.57
VPS72YDR485C YER184CP39961 794 aa5.27□□□□□ -1.57
VPS72YDR485C NBP1P52919 319 aaPredicted RBP5.27□□□□□ -1.57
VPS72YDR485C SLI1P53304 468 aa5.27□□□□□ -1.57
VPS72YDR485C YMR226CQ05016 267 aaKnown RBP5.27□□□□□ -1.57
VPS72YDR485C YRA1Q12159 226 aaKnown RBP5.27□□□□□ -1.57
VPS72YDR485C AMD1P15274 810 aaKnown RBP5.26□□□□□ -1.57
VPS72YDR485C DCC1P25559 380 aa5.26□□□□□ -1.57
VPS72YDR485C COX13P32799 129 aa5.26□□□□□ -1.57
VPS72YDR485C YBR056WP38081 501 aa5.26□□□□□ -1.57
VPS72YDR485C RIM2P38127 377 aa5.26□□□□□ -1.57
VPS72YDR485C ARR2Q06597 130 aa5.26□□□□□ -1.57
VPS72YDR485C GAL4P04386 881 aa5.26□□□□□ -1.57
VPS72YDR485C MBR1P23493 339 aa5.26□□□□□ -1.57
VPS72YDR485C ACB1P31787 87 aa5.26□□□□□ -1.57
VPS72YDR485C SWD2P36104 329 aaPredicted RBP5.26□□□□□ -1.57
VPS72YDR485C MAK5P38112 773 aaPredicted RBP5.26□□□□□ -1.57
VPS72YDR485C NPT1P39683 429 aaKnown RBP5.26□□□□□ -1.57
VPS72YDR485C YNL194CP40169 301 aa5.26□□□□□ -1.57
VPS72YDR485C YNR048WP53740 393 aa5.26□□□□□ -1.57
VPS72YDR485C YLR108CQ12259 485 aa5.26□□□□□ -1.57
VPS72YDR485C YDR157WA0A023PZE8 133 aa5.25□□□□□ -1.57
VPS72YDR485C BI2P03873 423 aa5.25□□□□□ -1.57
VPS72YDR485C REV1P12689 985 aa5.25□□□□□ -1.57
VPS72YDR485C LIP5P32875 414 aa5.25□□□□□ -1.57
VPS72YDR485C MCR1P36060 302 aaKnown RBP5.25□□□□□ -1.57
VPS72YDR485C MRX3P38172 270 aa5.25□□□□□ -1.57
VPS72YDR485C NRD1P53617 575 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
VPS72YDR485C KIN4Q01919 800 aa5.25□□□□□ -1.57
VPS72YDR485C THI20Q08224 551 aa5.25□□□□□ -1.57
VPS72YDR485C ABP140Q08641 628 aaKnown RBP5.25□□□□□ -1.57
VPS72YDR485C NCA2Q12374 616 aa5.25□□□□□ -1.57
VPS72YDR485C ERP3Q12403 225 aa5.25□□□□□ -1.57
VPS72YDR485C YMR31P19955 123 aa5.24□□□□□ -1.57
VPS72YDR485C COQ3P27680 312 aa5.24□□□□□ -1.57
VPS72YDR485C YKL187CP34231 750 aa5.24□□□□□ -1.57
VPS72YDR485C PCL6P40038 420 aa5.24□□□□□ -1.57
VPS72YDR485C YRB1P41920 201 aaKnown RBP5.24□□□□□ -1.57
VPS72YDR485C YPT11P48559 417 aa5.24□□□□□ -1.57
VPS72YDR485C SEC13Q04491 297 aaKnown RBP5.24□□□□□ -1.57
VPS72YDR485C MRPL8P22353 238 aa5.24□□□□□ -1.57
VPS72YDR485C VPS21P36017 210 aaKnown RBP5.24□□□□□ -1.57
VPS72YDR485C FRE2P36033 711 aa5.24□□□□□ -1.57
VPS72YDR485C KEG1P43614 200 aa5.24□□□□□ -1.57
VPS72YDR485C ZRG17P53735 605 aa5.24□□□□□ -1.57
VPS72YDR485C SPC34P36131 295 aa5.23□□□□□ -1.57
VPS72YDR485C SDS3P40505 327 aa5.23□□□□□ -1.57
VPS72YDR485C GAT1P43574 510 aa5.23□□□□□ -1.57
VPS72YDR485C JHD2P47156 728 aaPredicted RBP5.23□□□□□ -1.57
VPS72YDR485C SPR6Q01684 191 aa5.23□□□□□ -1.57
VPS72YDR485C ASR1Q06834 288 aa5.23□□□□□ -1.57
VPS72YDR485C SGT1Q08446 395 aa5.23□□□□□ -1.57
VPS72YDR485C DSE3Q08729 430 aa5.23□□□□□ -1.57
VPS72YDR485C RGT2Q12300 763 aa5.23□□□□□ -1.57
VPS72YDR485C RPL27AP0C2H6 136 aaKnown RBP5.23□□□□□ -1.57
VPS72YDR485C RPL27BP0C2H7 136 aaKnown RBP5.23□□□□□ -1.57
VPS72YDR485C POX1P13711 748 aa5.23□□□□□ -1.57
VPS72YDR485C NUP2P32499 720 aa5.23□□□□□ -1.57
VPS72YDR485C UBC6P33296 250 aaPredicted RBP5.23□□□□□ -1.57
VPS72YDR485C PHD1P36093 366 aa5.23□□□□□ -1.57
VPS72YDR485C YGR067CP53243 804 aa5.23□□□□□ -1.57
VPS72YDR485C QCR7P00128 127 aa5.22□□□□□ -1.57
VPS72YDR485C RPP0P05317 312 aaKnown RBP5.22□□□□□ -1.57
VPS72YDR485C RPL31AP0C2H8 113 aaKnown RBP5.22□□□□□ -1.57
VPS72YDR485C PDR3P33200 976 aa5.22□□□□□ -1.57
VPS72YDR485C PRS2P38620 318 aaKnown RBP5.22□□□□□ -1.57
VPS72YDR485C RBG1P39729 369 aa5.22□□□□□ -1.57
VPS72YDR485C IRC4Q03036 179 aa5.22□□□□□ -1.57
VPS72YDR485C BET5Q03630 159 aa5.22□□□□□ -1.57
VPS72YDR485C FAR8Q05040 523 aa5.22□□□□□ -1.57
VPS72YDR485C GLO2Q05584 274 aa5.22□□□□□ -1.57
VPS72YDR485C HIS1P00498 297 aaKnown RBP5.22□□□□□ -1.57
VPS72YDR485C PAB1P04147 577 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
VPS72YDR485C YBR121C-AP0C5L4 52 aa5.22□□□□□ -1.57
VPS72YDR485C MRP1P10662 321 aaKnown RBP5.22□□□□□ -1.57
VPS72YDR485C HCM1P25364 564 aa5.22□□□□□ -1.57
VPS72YDR485C YCR100CP25606 316 aa5.22□□□□□ -1.57
VPS72YDR485C YEF1P32622 495 aa5.22□□□□□ -1.57
VPS72YDR485C DDI1P40087 428 aa5.22□□□□□ -1.57
VPS72YDR485C CSM2P40465 213 aa5.22□□□□□ -1.57
VPS72YDR485C YPL077CQ02831 240 aa5.22□□□□□ -1.57
VPS72YDR485C BSC1Q12140 328 aa5.22□□□□□ -1.57
VPS72YDR485C NAM2P11325 894 aa5.21□□□□□ -1.57
VPS72YDR485C ATO2P32907 282 aa5.21□□□□□ -1.57
VPS72YDR485C STP1Q00947 519 aa5.21□□□□□ -1.57
VPS72YDR485C CTL1Q03220 320 aaKnown RBP5.21□□□□□ -1.57
VPS72YDR485C YAP7Q08182 245 aa5.21□□□□□ -1.57
VPS72YDR485C VIK1Q12045 647 aa5.21□□□□□ -1.57
VPS72YDR485C DAP1Q12091 152 aa5.21□□□□□ -1.57
VPS72YDR485C CAP2P13517 287 aa5.21□□□□□ -1.58
VPS72YDR485C SPO11P23179 398 aa5.21□□□□□ -1.58
VPS72YDR485C EXG1P23776 448 aaKnown RBP5.21□□□□□ -1.58
VPS72YDR485C RFA3P26755 122 aaKnown RBP5.21□□□□□ -1.58
VPS72YDR485C ZRT1P32804 376 aa5.21□□□□□ -1.58
VPS72YDR485C SEC72P39742 193 aaKnown RBP5.21□□□□□ -1.58
VPS72YDR485C VPS52P39904 641 aa5.21□□□□□ -1.58
VPS72YDR485C PAC2P39937 518 aa5.21□□□□□ -1.58
VPS72YDR485C SMB1P40018 196 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms