RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W RCK2P38623 610 aa2.95□□□□□ -1.94
SHR3YDL212W YPR195CQ06594 109 aa2.95□□□□□ -1.94
SHR3YDL212W YOR012WQ12351 137 aa2.95□□□□□ -1.94
SHR3YDL212W FSH3Q99369 266 aa2.95□□□□□ -1.94
SHR3YDL212W EFB1P32471 206 aaKnown RBP2.94□□□□□ -1.94
SHR3YDL212W SWI3P32591 825 aa2.94□□□□□ -1.94
SHR3YDL212W YPT35P38815 214 aaKnown RBP2.94□□□□□ -1.94
SHR3YDL212W YHR182WP38870 785 aa2.94□□□□□ -1.94
SHR3YDL212W HST4P53688 370 aa2.94□□□□□ -1.94
SHR3YDL212W IGO1P53897 168 aa2.94□□□□□ -1.94
SHR3YDL212W SED5Q01590 340 aa2.94□□□□□ -1.94
SHR3YDL212W API2Q04413 109 aa2.94□□□□□ -1.94
SHR3YDL212W YOL029CQ08187 201 aa2.94□□□□□ -1.94
SHR3YDL212W YOL075CQ08234 1294 aa2.94□□□□□ -1.94
SHR3YDL212W UBA3Q99344 299 aa2.94□□□□□ -1.94
SHR3YDL212W FLO11P08640 1367 aa2.93□□□□□ -1.94
SHR3YDL212W GRR1P24814 1151 aa2.93□□□□□ -1.94
SHR3YDL212W FRM2P37261 193 aa2.93□□□□□ -1.94
SHR3YDL212W MOB2P43563 287 aa2.93□□□□□ -1.94
SHR3YDL212W CPR7P47103 393 aa2.93□□□□□ -1.94
SHR3YDL212W LST7P53237 242 aa2.93□□□□□ -1.94
SHR3YDL212W UTP6Q02354 440 aaKnown RBP2.93□□□□□ -1.94
SHR3YDL212W SMP3Q04174 516 aa2.93□□□□□ -1.94
SHR3YDL212W FRE6Q12473 712 aa2.93□□□□□ -1.94
SHR3YDL212W SKS1Q12505 502 aa2.93□□□□□ -1.94
SHR3YDL212W FAA1P30624 700 aaKnown RBP2.92□□□□□ -1.94
SHR3YDL212W PTK1P36002 662 aaPredicted RBP2.92□□□□□ -1.94
SHR3YDL212W ADH5P38113 351 aaKnown RBP2.92□□□□□ -1.94
SHR3YDL212W GGC1P38988 300 aa2.92□□□□□ -1.94
SHR3YDL212W SNL1P40548 159 aa2.92□□□□□ -1.94
SHR3YDL212W YNR068CP53754 272 aa2.92□□□□□ -1.94
SHR3YDL212W MMT2Q08970 484 aa2.92□□□□□ -1.94
SHR3YDL212W CKI1P20485 582 aa2.91□□□□□ -1.94
SHR3YDL212W EOS1P53938 366 aa2.91□□□□□ -1.94
SHR3YDL212W TFB5Q3E7C1 72 aaPredicted RBP2.91□□□□□ -1.94
SHR3YDL212W RPL6BP05739 176 aaKnown RBP2.9□□□□□ -1.95
SHR3YDL212W FUS3P16892 353 aaKnown RBP2.9□□□□□ -1.95
SHR3YDL212W UBA1P22515 1024 aaKnown RBP2.9□□□□□ -1.95
SHR3YDL212W MRPS5P33759 307 aa2.9□□□□□ -1.95
SHR3YDL212W YBL028CP38202 106 aa2.9□□□□□ -1.95
SHR3YDL212W YCH1P42937 148 aa2.9□□□□□ -1.95
SHR3YDL212W LSG1P53145 640 aaKnown RBP2.9□□□□□ -1.95
SHR3YDL212W RPL6AQ02326 176 aaKnown RBP2.9□□□□□ -1.95
SHR3YDL212W CSM3Q04659 317 aa2.9□□□□□ -1.95
SHR3YDL212W ALE1Q08548 619 aa2.9□□□□□ -1.95
SHR3YDL212W YDR018CQ12185 396 aa2.9□□□□□ -1.95
SHR3YDL212W NFI1Q12216 726 aa2.9□□□□□ -1.95
SHR3YDL212W BGL2P15703 313 aaKnown RBP2.89□□□□□ -1.95
SHR3YDL212W POT1P27796 417 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
SHR3YDL212W VPH1P32563 840 aaKnown RBP2.89□□□□□ -1.95
SHR3YDL212W IME2P32581 645 aa2.89□□□□□ -1.95
SHR3YDL212W TIP20P33891 701 aa2.89□□□□□ -1.95
SHR3YDL212W DAD2P36162 133 aa2.89□□□□□ -1.95
SHR3YDL212W IST2P38250 946 aa2.89□□□□□ -1.95
SHR3YDL212W TRR2P38816 342 aa2.89□□□□□ -1.95
SHR3YDL212W ZRG17P53735 605 aa2.89□□□□□ -1.95
SHR3YDL212W MRX8Q05473 314 aa2.89□□□□□ -1.95
SHR3YDL212W STE2D6VTK4 431 aa2.88□□□□□ -1.95
SHR3YDL212W COX10P21592 462 aa2.88□□□□□ -1.95
SHR3YDL212W LAS1P36146 502 aaPredicted RBP2.88□□□□□ -1.95
SHR3YDL212W TAF10Q12030 206 aa2.88□□□□□ -1.95
SHR3YDL212W RPN6Q12377 434 aa2.88□□□□□ -1.95
SHR3YDL212W PHO84P25297 587 aaKnown RBP2.87□□□□□ -1.95
SHR3YDL212W MXR2P25566 168 aa2.87□□□□□ -1.95
SHR3YDL212W ZIP1P31111 875 aa2.87□□□□□ -1.95
SHR3YDL212W MKK1P32490 508 aa2.87□□□□□ -1.95
SHR3YDL212W GDT1P38301 280 aaPredicted RBP2.87□□□□□ -1.95
SHR3YDL212W UFE1P41834 346 aa2.87□□□□□ -1.95
SHR3YDL212W MPS2P53159 387 aa2.87□□□□□ -1.95
SHR3YDL212W INP2Q03824 705 aa2.87□□□□□ -1.95
SHR3YDL212W NAT4Q04751 285 aa2.87□□□□□ -1.95
SHR3YDL212W RAD1P06777 1100 aa2.86□□□□□ -1.95
SHR3YDL212W MAS1P10507 462 aa2.86□□□□□ -1.95
SHR3YDL212W UTR1P21373 530 aa2.86□□□□□ -1.95
SHR3YDL212W RAD23P32628 398 aaKnown RBP2.86□□□□□ -1.95
SHR3YDL212W AST1P35183 429 aa2.86□□□□□ -1.95
SHR3YDL212W SIF2P38262 535 aa2.86□□□□□ -1.95
SHR3YDL212W RBG1P39729 369 aa2.86□□□□□ -1.95
SHR3YDL212W YGR016WP53209 190 aa2.86□□□□□ -1.95
SHR3YDL212W DBP9Q06218 594 aaKnown RBP2.86□□□□□ -1.95
SHR3YDL212W SPT7P35177 1332 aa2.86□□□□□ -1.95
SHR3YDL212W THR4P16120 514 aaKnown RBP2.85□□□□□ -1.95
SHR3YDL212W OPI1P21957 404 aa2.85□□□□□ -1.95
SHR3YDL212W SKG6P32900 734 aaPredicted RBP2.85□□□□□ -1.95
SHR3YDL212W TAE1P38340 232 aa2.85□□□□□ -1.95
SHR3YDL212W BDH1P39714 382 aa2.85□□□□□ -1.95
SHR3YDL212W YIR035CP40579 254 aa2.85□□□□□ -1.95
SHR3YDL212W NAS6P50086 228 aa2.85□□□□□ -1.95
SHR3YDL212W YDL211CQ12121 372 aa2.85□□□□□ -1.95
SHR3YDL212W SAL1D6W196 494 aa2.84□□□□□ -1.95
SHR3YDL212W TPM1P17536 199 aaKnown RBP2.84□□□□□ -1.95
SHR3YDL212W ARF2P19146 181 aaKnown RBP2.84□□□□□ -1.95
SHR3YDL212W RDS1P25611 832 aa2.84□□□□□ -1.95
SHR3YDL212W URA10P30402 227 aa2.84□□□□□ -1.95
SHR3YDL212W CBF5P33322 483 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
SHR3YDL212W YHR122WP38829 231 aa2.84□□□□□ -1.95
SHR3YDL212W SPO73P40031 143 aa2.84□□□□□ -1.95
SHR3YDL212W COS4P43542 379 aa2.84□□□□□ -1.95
SHR3YDL212W YFR018CP43599 363 aa2.84□□□□□ -1.95
SHR3YDL212W YHC3P47040 408 aa2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 75.3 ms