RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W RAD30Q04049 632 aa1.53□□□□□ -2.16
TRM3YDL112W RQC1Q05468 723 aaKnown RBP1.53□□□□□ -2.16
TRM3YDL112W BUR2Q05949 395 aa1.53□□□□□ -2.16
TRM3YDL112W VPS74Q06385 345 aa1.53□□□□□ -2.16
TRM3YDL112W CRN1Q06440 651 aa1.53□□□□□ -2.16
TRM3YDL112W SWA2Q06677 668 aa1.53□□□□□ -2.16
TRM3YDL112W HER1Q12276 1246 aa1.53□□□□□ -2.16
TRM3YDL112W SFG1Q12507 346 aa1.53□□□□□ -2.16
TRM3YDL112W SPO24Q3E752 67 aa1.53□□□□□ -2.16
TRM3YDL112W DYN1P36022 4092 aa1.53□□□□□ -2.17
TRM3YDL112W CDC8P00572 216 aa1.52□□□□□ -2.17
TRM3YDL112W ARG4P04076 463 aaPredicted RBP1.52□□□□□ -2.17
TRM3YDL112W HXK2P04807 486 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W ATP4P05626 244 aa1.52□□□□□ -2.17
TRM3YDL112W CMD1P06787 147 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W RNA1P11745 407 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W GCD2P12754 651 aaPredicted RBP1.52□□□□□ -2.17
TRM3YDL112W NMT1P14743 455 aa1.52□□□□□ -2.17
TRM3YDL112W RPI1P23250 407 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W YCL049CP25577 312 aa1.52□□□□□ -2.17
TRM3YDL112W IDH2P28241 369 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W MSS1P32559 526 aaPredicted RBP1.52□□□□□ -2.17
TRM3YDL112W RPC34P32910 317 aa1.52□□□□□ -2.17
TRM3YDL112W TPO5P36029 618 aa1.52□□□□□ -2.17
TRM3YDL112W LAS1P36146 502 aaPredicted RBP1.52□□□□□ -2.17
TRM3YDL112W SPP381P38282 291 aaPredicted RBP1.52□□□□□ -2.17
TRM3YDL112W SEN34P39707 275 aa1.52□□□□□ -2.17
TRM3YDL112W AYR1P40471 297 aa1.52□□□□□ -2.17
TRM3YDL112W PAC11P40960 533 aa1.52□□□□□ -2.17
TRM3YDL112W IRC6P43615 237 aa1.52□□□□□ -2.17
TRM3YDL112W RPE1P46969 238 aa1.52□□□□□ -2.17
TRM3YDL112W MAL12P53341 584 aa1.52□□□□□ -2.17
TRM3YDL112W IDP3P53982 420 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W RHO4Q00246 291 aa1.52□□□□□ -2.17
TRM3YDL112W YDR249CQ03787 373 aa1.52□□□□□ -2.17
TRM3YDL112W GIS1Q03833 894 aa1.52□□□□□ -2.17
TRM3YDL112W ERB1Q04660 807 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W SSQ1Q05931 657 aaPredicted RBP1.52□□□□□ -2.17
TRM3YDL112W PDR8Q06149 701 aa1.52□□□□□ -2.17
TRM3YDL112W YOR214CQ12282 236 aa1.52□□□□□ -2.17
TRM3YDL112W SRN2Q99176 213 aa1.52□□□□□ -2.17
TRM3YDL112W YSF3P0C074 85 aaPredicted RBP1.52□□□□□ -2.17
TRM3YDL112W BAR1P12630 587 aa1.52□□□□□ -2.17
TRM3YDL112W CBS1P14066 229 aa1.52□□□□□ -2.17
TRM3YDL112W AIM17P23180 465 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W SGV1P23293 657 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W LAC1P28496 418 aa1.52□□□□□ -2.17
TRM3YDL112W EHD3P28817 500 aa1.52□□□□□ -2.17
TRM3YDL112W AVT7P40501 490 aa1.52□□□□□ -2.17
TRM3YDL112W ATP22P50273 684 aaPredicted RBP1.52□□□□□ -2.17
TRM3YDL112W PET191Q02772 108 aa1.52□□□□□ -2.17
TRM3YDL112W HMO1Q03973 246 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W RNH1Q04740 348 aa1.52□□□□□ -2.17
TRM3YDL112W GLO2Q05584 274 aa1.52□□□□□ -2.17
TRM3YDL112W UTP21Q06078 939 aaPredicted RBP1.52□□□□□ -2.17
TRM3YDL112W RDR1Q08904 546 aa1.52□□□□□ -2.17
TRM3YDL112W SIR3P06701 978 aa1.52□□□□□ -2.17
TRM3YDL112W RHO2P06781 192 aa1.52□□□□□ -2.17
TRM3YDL112W HSC82P15108 705 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W SCO1P23833 295 aa1.52□□□□□ -2.17
TRM3YDL112W MTR2P34232 184 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W RRN3P36070 627 aa1.52□□□□□ -2.17
TRM3YDL112W SOK1P40317 901 aa1.52□□□□□ -2.17
TRM3YDL112W PEP8P40335 379 aa1.52□□□□□ -2.17
TRM3YDL112W RPL10P41805 221 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W GDS1P41913 522 aa1.52□□□□□ -2.17
TRM3YDL112W RPS12P48589 143 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W YNL140CP53910 189 aa1.52□□□□□ -2.17
TRM3YDL112W YLL007CQ07799 665 aa1.52□□□□□ -2.17
TRM3YDL112W SKS1Q12505 502 aa1.52□□□□□ -2.17
TRM3YDL112W RPB2P08518 1224 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W UTR1P21373 530 aa1.52□□□□□ -2.17
TRM3YDL112W SAN1P22470 610 aa1.52□□□□□ -2.17
TRM3YDL112W CTR86P25355 563 aa1.52□□□□□ -2.17
TRM3YDL112W MCM10P32354 571 aa1.52□□□□□ -2.17
TRM3YDL112W CAT2P32796 670 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W SDH3P33421 198 aa1.52□□□□□ -2.17
TRM3YDL112W FAA2P39518 744 aa1.52□□□□□ -2.17
TRM3YDL112W LIA1P47120 325 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W IMA1P53051 589 aa1.52□□□□□ -2.17
TRM3YDL112W NOP19P53317 196 aaPredicted RBP1.52□□□□□ -2.17
TRM3YDL112W ARC35P53731 342 aaKnown RBP1.52□□□□□ -2.17
TRM3YDL112W RIM13Q03792 727 aa1.52□□□□□ -2.17
TRM3YDL112W YMR155WQ03795 547 aa1.52□□□□□ -2.17
TRM3YDL112W MRPL1Q04599 285 aa1.52□□□□□ -2.17
TRM3YDL112W FDH1Q08911 376 aa1.52□□□□□ -2.17
TRM3YDL112W NCE102Q12207 173 aaRIP-Chip data1.52□□□□□ -2.17not detected
TRM3YDL112W SIA1Q12212 622 aa1.52□□□□□ -2.17
TRM3YDL112W SPE4Q12455 300 aa1.52□□□□□ -2.17
TRM3YDL112W YPR064WQ12492 139 aa1.52□□□□□ -2.17
TRM3YDL112W Q0144Q9ZZW2 109 aa1.52□□□□□ -2.17
TRM3YDL112W RPL20AP0CX23 172 aaKnown RBP1.51□□□□□ -2.17
TRM3YDL112W RPL20BP0CX24 172 aaPredicted RBP1.51□□□□□ -2.17
TRM3YDL112W YHR214C-DP0CX93 97 aa1.51□□□□□ -2.17
TRM3YDL112W GAL3P13045 520 aa1.51□□□□□ -2.17
TRM3YDL112W ART10P18634 518 aaKnown RBP1.51□□□□□ -2.17
TRM3YDL112W RPO26P20435 155 aa1.51□□□□□ -2.17
TRM3YDL112W SEC31P38968 1273 aaKnown RBP1.51□□□□□ -2.17
TRM3YDL112W SMX2P40204 77 aaKnown RBP1.51□□□□□ -2.17
TRM3YDL112W YJR141WP47172 347 aaPredicted RBP1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms