RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C BGL2P15703 313 aaKnown RBP1.72□□□□□ -2.13
ASM4YDL088C PMT2P31382 759 aa1.72□□□□□ -2.13
ASM4YDL088C MNL1P38888 796 aa1.72□□□□□ -2.13
ASM4YDL088C RPS14BP39516 138 aaKnown RBP1.72□□□□□ -2.13
ASM4YDL088C GDI1P39958 451 aaKnown RBP1.72□□□□□ -2.13
ASM4YDL088C VTI1Q04338 217 aa1.72□□□□□ -2.13
ASM4YDL088C YLH47Q06493 454 aa1.72□□□□□ -2.13
ASM4YDL088C PAR32Q12515 295 aaKnown RBP1.72□□□□□ -2.13
ASM4YDL088C RRP7P25368 297 aaPredicted RBP1.71□□□□□ -2.14
ASM4YDL088C UIP5P36137 443 aa1.71□□□□□ -2.14
ASM4YDL088C LCB2P40970 561 aa1.71□□□□□ -2.14
ASM4YDL088C EOS1P53938 366 aa1.71□□□□□ -2.14
ASM4YDL088C YDR286CQ05530 114 aa1.71□□□□□ -2.14
ASM4YDL088C SHS1Q07657 551 aa1.71□□□□□ -2.14
ASM4YDL088C MNE1P24720 663 aa1.7□□□□□ -2.14
ASM4YDL088C SSE1P32589 693 aaKnown RBP1.7□□□□□ -2.14
ASM4YDL088C MPP10P47083 593 aaKnown RBP1.7□□□□□ -2.14
ASM4YDL088C MGR3Q04472 501 aa1.7□□□□□ -2.14
ASM4YDL088C MMT2Q08970 484 aa1.7□□□□□ -2.14
ASM4YDL088C SPE3Q12074 293 aaKnown RBP1.7□□□□□ -2.14
ASM4YDL088C SCH9P11792 824 aaKnown RBP1.69□□□□□ -2.14
ASM4YDL088C DAL5P15365 543 aa1.69□□□□□ -2.14
ASM4YDL088C COX10P21592 462 aa1.69□□□□□ -2.14
ASM4YDL088C PHO84P25297 587 aaKnown RBP1.69□□□□□ -2.14
ASM4YDL088C YKR015CP36111 568 aa1.69□□□□□ -2.14
ASM4YDL088C DAD2P36162 133 aa1.69□□□□□ -2.14
ASM4YDL088C POP2P39008 433 aa1.69□□□□□ -2.14
ASM4YDL088C MLC1P53141 149 aa1.69□□□□□ -2.14
ASM4YDL088C UTP15Q04305 513 aaKnown RBP1.69□□□□□ -2.14
ASM4YDL088C GYL1Q04322 720 aa1.69□□□□□ -2.14
ASM4YDL088C NDL1Q06568 189 aa1.69□□□□□ -2.14
ASM4YDL088C RPN5Q12250 445 aaKnown RBP1.69□□□□□ -2.14
ASM4YDL088C RPL6BP05739 176 aaKnown RBP1.68□□□□□ -2.14
ASM4YDL088C RPS23AP0CX29 145 aaKnown RBP1.68□□□□□ -2.14
ASM4YDL088C RPS23BP0CX30 145 aa1.68□□□□□ -2.14
ASM4YDL088C CPT1P17898 393 aa1.68□□□□□ -2.14
ASM4YDL088C SPP381P38282 291 aaPredicted RBP1.68□□□□□ -2.14
ASM4YDL088C YMR262WP38430 313 aa1.68□□□□□ -2.14
ASM4YDL088C RRF1P38771 230 aa1.68□□□□□ -2.14
ASM4YDL088C YHR182WP38870 785 aa1.68□□□□□ -2.14
ASM4YDL088C MOB2P43563 287 aa1.68□□□□□ -2.14
ASM4YDL088C FYV8P46949 817 aaKnown RBP1.68□□□□□ -2.14
ASM4YDL088C YJR030CP47101 745 aa1.68□□□□□ -2.14
ASM4YDL088C GPI8P49018 411 aa1.68□□□□□ -2.14
ASM4YDL088C PRM1P53835 661 aa1.68□□□□□ -2.14
ASM4YDL088C RPL6AQ02326 176 aaKnown RBP1.68□□□□□ -2.14
ASM4YDL088C APC4Q04601 652 aa1.68□□□□□ -2.14
ASM4YDL088C GPM3Q12326 303 aa1.68□□□□□ -2.14
ASM4YDL088C STF1P01098 86 aa1.68□□□□□ -2.14
ASM4YDL088C CUP2P15315 225 aa1.68□□□□□ -2.14
ASM4YDL088C TRX1P22217 103 aaKnown RBP1.68□□□□□ -2.14
ASM4YDL088C POT1P27796 417 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
ASM4YDL088C YEL043WP32618 956 aa1.68□□□□□ -2.14
ASM4YDL088C EBP2P36049 427 aaKnown RBP1.68□□□□□ -2.14
ASM4YDL088C PES4P39684 611 aa1.68□□□□□ -2.14
ASM4YDL088C NOP6Q07623 225 aaKnown RBP1.68□□□□□ -2.14
ASM4YDL088C TFB5Q3E7C1 72 aaPredicted RBP1.68□□□□□ -2.14
ASM4YDL088C NBL1Q3E7Y6 73 aa1.68□□□□□ -2.14
ASM4YDL088C TKL2P33315 681 aa1.67□□□□□ -2.14
ASM4YDL088C TIP20P33891 701 aa1.67□□□□□ -2.14
ASM4YDL088C LAS1P36146 502 aaPredicted RBP1.67□□□□□ -2.14
ASM4YDL088C SIF2P38262 535 aa1.67□□□□□ -2.14
ASM4YDL088C ASG7P46993 209 aa1.67□□□□□ -2.14
ASM4YDL088C NAS6P50086 228 aa1.67□□□□□ -2.14
ASM4YDL088C NFI1Q12216 726 aa1.67□□□□□ -2.14
ASM4YDL088C FRE6Q12473 712 aa1.67□□□□□ -2.14
ASM4YDL088C RPL1AP0CX43 217 aaKnown RBP1.66□□□□□ -2.14
ASM4YDL088C RPL1BP0CX44 217 aaKnown RBP1.66□□□□□ -2.14
ASM4YDL088C URA10P30402 227 aa1.66□□□□□ -2.14
ASM4YDL088C SMI1P32566 505 aa1.66□□□□□ -2.14
ASM4YDL088C YHR177WP38867 453 aa1.66□□□□□ -2.14
ASM4YDL088C RBG1P39729 369 aa1.66□□□□□ -2.14
ASM4YDL088C SCC4P40090 624 aa1.66□□□□□ -2.14
ASM4YDL088C EFM4P40516 257 aa1.66□□□□□ -2.14
ASM4YDL088C HIT1P46973 164 aa1.66□□□□□ -2.14
ASM4YDL088C PDR16P53860 351 aaKnown RBP1.66□□□□□ -2.14
ASM4YDL088C SMD1Q02260 146 aaPredicted RBP1.66□□□□□ -2.14
ASM4YDL088C GMC1Q04399 608 aa1.66□□□□□ -2.14
ASM4YDL088C DBP9Q06218 594 aaKnown RBP1.66□□□□□ -2.14
ASM4YDL088C REX3Q12090 404 aa1.66□□□□□ -2.14
ASM4YDL088C RTC5Q12108 567 aaKnown RBP1.66□□□□□ -2.14
ASM4YDL088C SRN2Q99176 213 aa1.66□□□□□ -2.14
ASM4YDL088C UBA3Q99344 299 aa1.66□□□□□ -2.14
ASM4YDL088C DAL80P26343 269 aa1.65□□□□□ -2.15
ASM4YDL088C ALK2P32789 676 aaPredicted RBP1.65□□□□□ -2.15
ASM4YDL088C YKL071WP36086 256 aa1.65□□□□□ -2.15
ASM4YDL088C SDH4P37298 181 aa1.65□□□□□ -2.15
ASM4YDL088C YSW1P38280 609 aa1.65□□□□□ -2.15
ASM4YDL088C TAE1P38340 232 aa1.65□□□□□ -2.15
ASM4YDL088C ARP5P53946 755 aa1.65□□□□□ -2.15
ASM4YDL088C RRB1Q04225 511 aaKnown RBP1.65□□□□□ -2.15
ASM4YDL088C IPK1Q06667 281 aa1.65□□□□□ -2.15
ASM4YDL088C YFH1Q07540 174 aa1.65□□□□□ -2.15
ASM4YDL088C DET1Q99288 334 aaKnown RBP1.65□□□□□ -2.15
ASM4YDL088C INO80P53115 1489 aa1.64□□□□□ -2.15
ASM4YDL088C RPC40P07703 335 aaKnown RBP1.64□□□□□ -2.15
ASM4YDL088C ADH5P38113 351 aaKnown RBP1.64□□□□□ -2.15
ASM4YDL088C YGP1P38616 354 aaKnown RBP1.64□□□□□ -2.15
ASM4YDL088C EFM1P38732 585 aa1.64□□□□□ -2.15
ASM4YDL088C ECM14P38836 430 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms