RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROT2	YBR229C	APC2	Q12440	853 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	FRE6	Q12473	712 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	NHP6B	P11633	99 aa	Known RBP	4.56	□□□□□ -1.68
ROT2	YBR229C	CBS1	P14066	229 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	ERD2	P18414	219 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	RPB5	P20434	215 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	YCK1	P23291	538 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	PRP28	P23394	588 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	DOA4	P32571	926 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	ECT1	P33412	323 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	TAF14	P35189	244 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	THI2	P38141	450 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	TRM7	P38238	310 aa	Known RBP	4.56	□□□□□ -1.68
ROT2	YBR229C	LEU5	P38702	357 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	RRF1	P38771	230 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	PKP1	P40530	394 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	BNA6	P43619	295 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	PMT5	P52867	743 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	CDH1	P53197	566 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	PGA1	P53896	198 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	DID2	P69771	204 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	YKR011C	Q02209	353 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	CTL1	Q03220	320 aa	Known RBP	4.56	□□□□□ -1.68
ROT2	YBR229C	ARV1	Q06541	321 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	SSK1	Q07084	712 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	CRT10	Q08226	957 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	YDL007C-A	Q2V2Q0	85 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	YLR099W-A	Q3E798	87 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	Q0182	Q9ZZW1	134 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	TOM1	Q03280	3268 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	HIS3	P06633	220 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	ERD1	P16151	362 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	SCL1	P21243	252 aa	Known RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	YJU2	P28320	278 aa	Predicted RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	FUN26	P31381	517 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	ARC19	P33204	171 aa	Known RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	APL3	P38065	1025 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	PAU24	P38155	120 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	DED81	P38707	554 aa	Known RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	NEM1	P38757	446 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	YIL165C	P40446	119 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	POP1	P41812	875 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	ECM27	P47144	725 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	YGR250C	P53316	781 aa	Known RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	YPL068C	Q02749	293 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	NAT4	Q04751	285 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	YDR344C	Q05510	147 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	YLR224W	Q05947	369 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	FRE3	Q08905	711 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	YDL211C	Q12121	372 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	YLR111W	Q12528	110 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	RPS18A	P0CX55	146 aa	Known RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	RPS18B	P0CX56	146 aa	Predicted RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	MCK1	P21965	375 aa	Known RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	YCR100C	P25606	316 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	ORC2	P32833	620 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	DTR1	P38125	572 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	IDS2	P46958	469 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	FAA4	P47912	694 aa	Known RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	MTL1	P53214	551 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	ELP4	Q02884	456 aa	Known RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	MTQ2	Q03920	221 aa	Predicted RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	RRN11	Q04712	507 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	FDH1	Q08911	376 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	PFA4	Q12006	378 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	TIR4	Q12218	487 aa	Predicted RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	GCN4	P03069	281 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	COQ8	P27697	501 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	VPS17	P32913	551 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	YKL077W	P36081	392 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	PTH1	P38876	190 aa	Known RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	ICE2	P40499	491 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	NEO1	P40527	1151 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	DPB11	P47027	764 aa	Predicted RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	ART5	P53244	586 aa	Known RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	VOA1	P53262	265 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	YGR266W	P53326	701 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	TDA7	P53882	636 aa	Predicted RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	AQR1	P53943	586 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	HXT11	P54862	567 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	YMR315W	Q04869	349 aa	Known RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	PSF1	Q12488	208 aa		4.55	□□□□□ -1.68
ROT2	YBR229C	RPS21B	Q3E754	87 aa	Known RBP	4.55	□□□□□ -1.68
ROT2	YBR229C	COX9	P07255	59 aa		4.54	□□□□□ -1.68
ROT2	YBR229C	NPR1	P22211	790 aa		4.54	□□□□□ -1.68
ROT2	YBR229C	PUP1	P25043	261 aa		4.54	□□□□□ -1.68
ROT2	YBR229C	CDC12	P32468	407 aa	Known RBP	4.54	□□□□□ -1.68
ROT2	YBR229C	MSS1	P32559	526 aa	Predicted RBP	4.54	□□□□□ -1.68
ROT2	YBR229C	PDR3	P33200	976 aa		4.54	□□□□□ -1.68
ROT2	YBR229C	HTD2	P38790	280 aa	Known RBP	4.54	□□□□□ -1.68
ROT2	YBR229C	PTI1	P39927	425 aa	Predicted RBP	4.54	□□□□□ -1.68
ROT2	YBR229C	RPS12	P48589	143 aa	Known RBP	4.54	□□□□□ -1.68
ROT2	YBR229C	TOS2	P50078	622 aa		4.54	□□□□□ -1.68
ROT2	YBR229C	UBC12	P52491	188 aa		4.54	□□□□□ -1.68
ROT2	YBR229C	PPT1	P53043	513 aa		4.54	□□□□□ -1.68
ROT2	YBR229C	RPL6A	Q02326	176 aa	Known RBP	4.54	□□□□□ -1.68
ROT2	YBR229C	YDR541C	Q03049	344 aa		4.54	□□□□□ -1.68
ROT2	YBR229C	HLR1	Q04429	423 aa		4.54	□□□□□ -1.68
ROT2	YBR229C	CDC9	P04819	755 aa		4.54	□□□□□ -1.68
ROT2	YBR229C	FUR1	P18562	216 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 70.1 ms