RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W LEU1P07264 779 aaKnown RBP0.55□□□□□ -2.32
UTP20YBL004W ATP10P18496 279 aa0.55□□□□□ -2.32
UTP20YBL004W SOF1P33750 489 aaKnown RBP0.55□□□□□ -2.32
UTP20YBL004W YOX1P34161 385 aa0.55□□□□□ -2.32
UTP20YBL004W YBR138CP38277 524 aa0.55□□□□□ -2.32
UTP20YBL004W MIT1P40002 666 aa0.55□□□□□ -2.32
UTP20YBL004W SEC26P41810 973 aaKnown RBP0.55□□□□□ -2.32
UTP20YBL004W YGR122WP53272 402 aa0.55□□□□□ -2.32
UTP20YBL004W FHN1P53279 174 aa0.55□□□□□ -2.32
UTP20YBL004W CEF1Q03654 590 aaPredicted RBP0.55□□□□□ -2.32
UTP20YBL004W THI21Q08975 551 aa0.55□□□□□ -2.32
UTP20YBL004W YPS3Q12303 508 aa0.55□□□□□ -2.32
UTP20YBL004W OCA6Q12454 224 aa0.55□□□□□ -2.32
UTP20YBL004W BMT5P40493 336 aa0.55□□□□□ -2.32
UTP20YBL004W MSE1P48525 536 aa0.55□□□□□ -2.32
UTP20YBL004W YKE2P52553 114 aa0.55□□□□□ -2.32
UTP20YBL004W NAN1Q02931 896 aaKnown RBP0.55□□□□□ -2.32
UTP20YBL004W ATG39Q06159 398 aa0.55□□□□□ -2.32
UTP20YBL004W GAT3Q07928 141 aa0.55□□□□□ -2.32
UTP20YBL004W NRT1Q08485 598 aa0.55□□□□□ -2.32
UTP20YBL004W THI72Q08579 599 aa0.55□□□□□ -2.32
UTP20YBL004W FOL3Q12676 427 aaPredicted RBP0.55□□□□□ -2.32
UTP20YBL004W ALG7P07286 448 aa0.54□□□□□ -2.32
UTP20YBL004W ILV2P07342 687 aaKnown RBP0.54□□□□□ -2.32
UTP20YBL004W SAC7P17121 654 aa0.54□□□□□ -2.32
UTP20YBL004W SAC6P32599 642 aaKnown RBP0.54□□□□□ -2.32
UTP20YBL004W RTC2P38279 296 aa0.54□□□□□ -2.32
UTP20YBL004W APD1P38281 316 aa0.54□□□□□ -2.32
UTP20YBL004W RSP5P39940 809 aaKnown RBP0.54□□□□□ -2.32
UTP20YBL004W MIG3P39943 394 aa0.54□□□□□ -2.32
UTP20YBL004W YNR064CP53750 290 aa0.54□□□□□ -2.32
UTP20YBL004W CBT1P36038 271 aaPredicted RBP0.54□□□□□ -2.32
UTP20YBL004W TCM62P38228 572 aaKnown RBP0.54□□□□□ -2.32
UTP20YBL004W PCL5P38794 229 aa0.54□□□□□ -2.32
UTP20YBL004W NOP16P40007 231 aaKnown RBP0.54□□□□□ -2.32
UTP20YBL004W PRM5P40476 318 aa0.54□□□□□ -2.32
UTP20YBL004W ARF3P40994 183 aaRIP-Chip data0.54□□□□□ -2.32not detected
UTP20YBL004W AIP1P46680 615 aaKnown RBP0.54□□□□□ -2.32
UTP20YBL004W NUP100Q02629 959 aa0.54□□□□□ -2.32
UTP20YBL004W MSS11Q03825 758 aa0.54□□□□□ -2.32
UTP20YBL004W IZH2Q12442 317 aa0.54□□□□□ -2.32
UTP20YBL004W ANR2P36090 516 aaPredicted RBP0.54□□□□□ -2.32
UTP20YBL004W AHP1P38013 176 aaKnown RBP0.54□□□□□ -2.32
UTP20YBL004W AAD14P42884 376 aa0.54□□□□□ -2.32
UTP20YBL004W NAS6P50086 228 aa0.54□□□□□ -2.32
UTP20YBL004W GUP1P53154 560 aa0.54□□□□□ -2.32
UTP20YBL004W NCE101Q02820 53 aa0.54□□□□□ -2.32
UTP20YBL004W APC2Q12440 853 aa0.54□□□□□ -2.32
UTP20YBL004W MRX4Q12467 430 aa0.54□□□□□ -2.32
UTP20YBL004W CKA1P15790 372 aa0.54□□□□□ -2.32
UTP20YBL004W RFA1P22336 621 aaKnown RBP0.54□□□□□ -2.32
UTP20YBL004W TRS65P32893 560 aa0.54□□□□□ -2.32
UTP20YBL004W ECM15P35195 104 aa0.54□□□□□ -2.32
UTP20YBL004W RRN10P38204 145 aa0.54□□□□□ -2.32
UTP20YBL004W YIL166CP40445 542 aa0.54□□□□□ -2.32
UTP20YBL004W REE1P40893 198 aa0.54□□□□□ -2.32
UTP20YBL004W YDC1Q02896 317 aa0.54□□□□□ -2.32
UTP20YBL004W ECM11Q04110 302 aa0.54□□□□□ -2.32
UTP20YBL004W SPO20Q04359 397 aa0.54□□□□□ -2.32
UTP20YBL004W HOR7Q05827 59 aa0.54□□□□□ -2.32
UTP20YBL004W GGA1Q06336 557 aa0.54□□□□□ -2.32
UTP20YBL004W YDL109CQ12103 647 aa0.54□□□□□ -2.32
UTP20YBL004W RUD3Q12234 484 aaKnown RBP0.54□□□□□ -2.32
UTP20YBL004W TRP3P00937 484 aa0.54□□□□□ -2.32
UTP20YBL004W COR1P07256 457 aa0.54□□□□□ -2.32
UTP20YBL004W PEP4P07267 405 aaKnown RBP0.54□□□□□ -2.32
UTP20YBL004W CLB6P32943 380 aa0.54□□□□□ -2.32
UTP20YBL004W CHL4P38907 458 aa0.54□□□□□ -2.32
UTP20YBL004W SDT1P53078 280 aa0.54□□□□□ -2.32
UTP20YBL004W RCF2P53721 224 aa0.54□□□□□ -2.32
UTP20YBL004W SEC13Q04491 297 aaKnown RBP0.54□□□□□ -2.32
UTP20YBL004W TDA6Q06466 467 aa0.54□□□□□ -2.32
UTP20YBL004W YLH47Q06493 454 aa0.54□□□□□ -2.32
UTP20YBL004W SLF1Q12034 447 aaKnown RBP0.54□□□□□ -2.32
UTP20YBL004W RRP36Q12481 300 aaPredicted RBP0.54□□□□□ -2.32
UTP20YBL004W AFI1Q99222 893 aa0.54□□□□□ -2.32
UTP20YBL004W RPB5P20434 215 aa0.54□□□□□ -2.32
UTP20YBL004W CLB4P24871 460 aa0.54□□□□□ -2.32
UTP20YBL004W HSL7P38274 827 aa0.54□□□□□ -2.32
UTP20YBL004W VPS41P38959 992 aa0.54□□□□□ -2.32
UTP20YBL004W RVS167P39743 482 aaKnown RBP0.54□□□□□ -2.32
UTP20YBL004W EMP65P40085 556 aa0.54□□□□□ -2.32
UTP20YBL004W PUG1P40100 303 aa0.54□□□□□ -2.32
UTP20YBL004W MAM33P40513 266 aa0.54□□□□□ -2.32
UTP20YBL004W IRC24P40580 263 aa0.54□□□□□ -2.32
UTP20YBL004W PRM10P42946 383 aa0.54□□□□□ -2.32
UTP20YBL004W HAL1Q01766 294 aa0.54□□□□□ -2.32
UTP20YBL004W AHA1Q12449 350 aaKnown RBP0.54□□□□□ -2.32
UTP20YBL004W TIM9O74700 87 aa0.53□□□□□ -2.32
UTP20YBL004W RPS21AP0C0V8 87 aaKnown RBP0.53□□□□□ -2.32
UTP20YBL004W PRP6P19735 899 aaPredicted RBP0.53□□□□□ -2.32
UTP20YBL004W HXT2P23585 541 aa0.53□□□□□ -2.32
UTP20YBL004W ILV6P25605 309 aaKnown RBP0.53□□□□□ -2.32
UTP20YBL004W PRP18P33411 251 aaPredicted RBP0.53□□□□□ -2.32
UTP20YBL004W YBR013CP38215 129 aa0.53□□□□□ -2.32
UTP20YBL004W ZTA1P38230 334 aaKnown RBP0.53□□□□□ -2.32
UTP20YBL004W BIT2P38346 545 aa0.53□□□□□ -2.32
UTP20YBL004W ALP1P38971 573 aa0.53□□□□□ -2.32
UTP20YBL004W YJL213WP40896 331 aa0.53□□□□□ -2.32
UTP20YBL004W CIN2P46670 268 aa0.53□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms