RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 YCH1P42937 148 aa6.88□□□□□ -1.31
NME1NME1 LSG1P53145 640 aaKnown RBP6.88□□□□□ -1.31
NME1NME1 SFM1Q12314 213 aa6.88□□□□□ -1.31
NME1NME1 PFK27Q12471 397 aaPredicted RBP6.88□□□□□ -1.31
NME1NME1 RBK1P25332 333 aa6.87□□□□□ -1.31
NME1NME1 UTP25P40498 721 aaKnown RBP6.87□□□□□ -1.31
NME1NME1 TRM82Q03774 444 aa6.87□□□□□ -1.31
NME1NME1 GAS2Q06135 555 aa6.87□□□□□ -1.31
NME1NME1 STE7P06784 515 aa6.86□□□□□ -1.31
NME1NME1 MIR1P23641 311 aaKnown RBP6.86□□□□□ -1.31
NME1NME1 OM14P38325 134 aa6.86□□□□□ -1.31
NME1NME1 MMS21P38632 267 aa6.86□□□□□ -1.31
NME1NME1 PXR1P53335 271 aaPredicted RBP6.86□□□□□ -1.31
NME1NME1 ALE1Q08548 619 aa6.86□□□□□ -1.31
NME1NME1 MCT1Q12283 360 aa6.86□□□□□ -1.31
NME1NME1 DEP1P31385 405 aa6.85□□□□□ -1.31
NME1NME1 ACB1P31787 87 aa6.85□□□□□ -1.31
NME1NME1 BUD2P33314 1104 aa6.85□□□□□ -1.31
NME1NME1 PFS1P38872 237 aa6.85□□□□□ -1.31
NME1NME1 TIM17P39515 158 aa6.85□□□□□ -1.31
NME1NME1 RIB4P50861 169 aaPredicted RBP6.85□□□□□ -1.31
NME1NME1 VOA1P53262 265 aa6.85□□□□□ -1.31
NME1NME1 ATP16Q12165 160 aa6.85□□□□□ -1.31
NME1NME1 FRE8Q12209 686 aa6.85□□□□□ -1.31
NME1NME1 SAR1P20606 190 aaKnown RBP6.84□□□□□ -1.31
NME1NME1 PRE5P40302 234 aaKnown RBP6.84□□□□□ -1.31
NME1NME1 DBP6P53734 629 aaKnown RBP6.84□□□□□ -1.31
NME1NME1 VAC7P53950 1165 aa6.84□□□□□ -1.31
NME1NME1 PRP38Q00723 242 aaPredicted RBP6.84□□□□□ -1.31
NME1NME1 SLM3Q12093 417 aa6.84□□□□□ -1.31
NME1NME1 YIL002W-AQ3E7Z5 69 aa6.84□□□□□ -1.31
NME1NME1 MSS116P15424 664 aaKnown RBP6.83□□□□□ -1.32
NME1NME1 ZRC1P20107 442 aa6.83□□□□□ -1.32
NME1NME1 COS9P36034 407 aa6.83□□□□□ -1.32
NME1NME1 HEM14P40012 539 aa6.83□□□□□ -1.32
NME1NME1 ERV25P54837 211 aaKnown RBP6.83□□□□□ -1.32
NME1NME1 DDC1Q08949 612 aa6.83□□□□□ -1.32
NME1NME1 SLF1Q12034 447 aaKnown RBP6.83□□□□□ -1.32
NME1NME1 RPC40P07703 335 aaKnown RBP6.82□□□□□ -1.32
NME1NME1 REV1P12689 985 aa6.82□□□□□ -1.32
NME1NME1 DBP3P20447 523 aaKnown RBP6.82□□□□□ -1.32
NME1NME1 ITR2P30606 609 aa6.82□□□□□ -1.32
NME1NME1 LOC1P43586 204 aaPredicted RBP6.82□□□□□ -1.32
NME1NME1 AIM23P47015 356 aa6.82□□□□□ -1.32
NME1NME1 HCH1P53834 153 aa6.82□□□□□ -1.32
NME1NME1 ENT5Q03769 411 aaKnown RBP6.82□□□□□ -1.32
NME1NME1 MHR1Q06630 226 aa6.82□□□□□ -1.32
NME1NME1 TMC1Q08422 150 aaPredicted RBP6.82□□□□□ -1.32
NME1NME1 PAA1Q12447 191 aaKnown RBP6.82□□□□□ -1.32
NME1NME1 YPR1Q12458 312 aa6.82□□□□□ -1.32
NME1NME1 PRB1P09232 635 aa6.81□□□□□ -1.32
NME1NME1 SOL2P37262 315 aa6.81□□□□□ -1.32
NME1NME1 RCK2P38623 610 aa6.81□□□□□ -1.32
NME1NME1 MOB2P43563 287 aa6.81□□□□□ -1.32
NME1NME1 LOH1P47055 219 aa6.81□□□□□ -1.32
NME1NME1 RRG8Q06109 277 aa6.81□□□□□ -1.32
NME1NME1 DCP1Q12517 231 aaPredicted RBP6.81□□□□□ -1.32
NME1NME1 PMT2P31382 759 aa6.8□□□□□ -1.32
NME1NME1 WSC4P38739 605 aa6.8□□□□□ -1.32
NME1NME1 INA22P40576 216 aa6.8□□□□□ -1.32
NME1NME1 SLT2Q00772 484 aa6.8□□□□□ -1.32
NME1NME1 VAC14Q06708 880 aa6.8□□□□□ -1.32
NME1NME1 UNG1P12887 359 aa6.79□□□□□ -1.32
NME1NME1 CMK2P22517 447 aa6.79□□□□□ -1.32
NME1NME1 FET3P38993 636 aa6.79□□□□□ -1.32
NME1NME1 FHL1P39521 936 aa6.79□□□□□ -1.32
NME1NME1 MEP1P40260 492 aa6.79□□□□□ -1.32
NME1NME1 SUR7P54003 302 aa6.79□□□□□ -1.32
NME1NME1 YLR177WQ06251 628 aa6.79□□□□□ -1.32
NME1NME1 RPS14AP06367 137 aaKnown RBP6.78□□□□□ -1.32
NME1NME1 CAR2P07991 424 aaKnown RBP6.78□□□□□ -1.32
NME1NME1 PUT4P15380 627 aa6.78□□□□□ -1.32
NME1NME1 LDB16P25587 256 aa6.78□□□□□ -1.32
NME1NME1 IES6P32617 166 aa6.78□□□□□ -1.32
NME1NME1 YOX1P34161 385 aa6.78□□□□□ -1.32
NME1NME1 BMT2P38278 337 aa6.78□□□□□ -1.32
NME1NME1 RPS14BP39516 138 aaKnown RBP6.78□□□□□ -1.32
NME1NME1 IGD1P43598 195 aa6.78□□□□□ -1.32
NME1NME1 EGD1Q02642 157 aaKnown RBP6.78□□□□□ -1.32
NME1NME1 RPN6Q12377 434 aa6.78□□□□□ -1.32
NME1NME1 GAL7P08431 366 aa6.77□□□□□ -1.33
NME1NME1 MEI5P32489 222 aa6.77□□□□□ -1.33
NME1NME1 SPR1P32603 445 aa6.77□□□□□ -1.33
NME1NME1 EBP2P36049 427 aaKnown RBP6.77□□□□□ -1.33
NME1NME1 SAM4Q08985 325 aaKnown RBP6.77□□□□□ -1.33
NME1NME1 YKL162CP36052 402 aa6.76□□□□□ -1.33
NME1NME1 CDC40P40968 455 aaPredicted RBP6.76□□□□□ -1.33
NME1NME1 YLR152CP54072 576 aa6.76□□□□□ -1.33
NME1NME1 YLR413WQ06689 675 aa6.76□□□□□ -1.33
NME1NME1 YBR241CP38142 488 aa6.75□□□□□ -1.33
NME1NME1 SMF2P38778 549 aa6.75□□□□□ -1.33
NME1NME1 YGL039WP53183 348 aaKnown RBP6.75□□□□□ -1.33
NME1NME1 PNC1P53184 216 aaKnown RBP6.75□□□□□ -1.33
NME1NME1 CDH1P53197 566 aa6.75□□□□□ -1.33
NME1NME1 SPO19Q03029 223 aa6.75□□□□□ -1.33
NME1NME1 UBX2Q04228 584 aa6.75□□□□□ -1.33
NME1NME1 CTA1P15202 515 aa6.74□□□□□ -1.33
NME1NME1 UGA1P17649 471 aa6.74□□□□□ -1.33
NME1NME1 GPI18P38211 433 aa6.74□□□□□ -1.33
NME1NME1 SHE10P53075 577 aa6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 115.1 ms