RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 RASSF2P50749 326 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 ENAHQ8N8S7 591 aaPredicted RBP21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 HVCN1Q96D96 273 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 NDFIP2Q9NV92 336 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 CLCA2Q9UQC9 943 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 CCL15-CCL14A0A0B4J2E2 113 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 SEC31AO94979 1220 aaKnown RBP21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 CCL15Q16663 113 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 PAN2Q504Q3 1202 aaKnown RBP21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 DNAJC12Q9UKB3 198 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 UBA6A0AVT1 1052 aaPredicted RBP21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 EVI5O60447 810 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 LRRC31Q6UY01 552 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 GSDMAQ96QA5 445 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 TMEM39BQ9GZU3 492 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 COG4Q9H9E3 785 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 ZNRF3Q9ULT6 936 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 SSH2Q76I76 1423 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 OVOS2A0A0G2JMS6 1433 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 OVOS2A0A0J9YW53 1432 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 OVOS2Q6IE36 1432 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 ATXN7L3BQ96GX2 97 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 PPP1R13BQ96KQ4 1090 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 SYF2O95926 243 aaKnown RBP21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 STAG1Q8WVM7 1258 aa21.74■■□□□ 1.07
CDC42BPB-201ENST00000361246 NPC1L1Q9UHC9 1359 aa21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 SP8Q8IXZ3 490 aa21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 HOMER3Q9NSC5 361 aa21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 RNF123Q5XPI4 1314 aa21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 IPO5O00410 1097 aaKnown RBP21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 PRRG1O14668 218 aa21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 PRPF4O43172 522 aaKnown RBP eCLIP21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 LMNB2Q03252 620 aa21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 SRPRBQ9Y5M8 271 aaKnown RBP21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 LDHAP00338 332 aaKnown RBP21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 ATN1P54259 1190 aaPredicted RBP21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 SNAPC2Q13487 334 aa21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 LDHDQ86WU2 507 aa21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 CCDC195A0A1B0GUA6 201 aa21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 TTC4O95801 387 aa21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 ERLEC1Q96DZ1 483 aa21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 DNAJC6O75061 913 aa21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 TDP2O95551 362 aa21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 LCA5Q86VQ0 697 aa21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 SPATA2LQ8IUW3 424 aaPredicted RBP21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 FAM167AQ96KS9 214 aa21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 ZC3H4Q9UPT8 1303 aaKnown RBP21.73■■□□□ 1.07
CDC42BPB-201ENST00000361246 E5RI56 91 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 INPP1P49441 399 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 BBOF1Q8ND07 529 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 hCG_1984214I3L0E3 225 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 POLRMTO00411 1230 aaKnown RBP21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 ACSL3O95573 720 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 PDGFRBP09619 1106 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 TSNAXIP1Q2TAA8 658 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 TMTC3Q6ZXV5 915 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 ZNF713Q8N859 430 aaPredicted RBP21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 TBC1D16Q8TBP0 767 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 ADAM22Q9P0K1 906 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 FARP1Q9Y4F1 1045 aaPredicted RBP21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 SERPING1P05155 500 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 RWDD2AQ9UIY3 292 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 ZNF445P59923 1031 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 MAML1Q92585 1016 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 MRPL4Q9BYD3 311 aaKnown RBP21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 SNX2O60749 519 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 MT-ND3P03897 115 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 THEMIS2Q5TEJ8 643 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 SLC9A2Q9UBY0 812 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 DOLKQ9UPQ8 538 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 UBE2Q2LH0YL09 131 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 TCP1P17987 556 aaKnown RBP21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 VEPH1Q14D04 833 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 EIF2AK1Q9BQI3 630 aaKnown RBP21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 BRIP1Q9BX63 1249 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 STAP2Q9UGK3 403 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 AATKQ6ZMQ8 1374 aa21.72■■□□□ 1.07
CDC42BPB-201ENST00000361246 SPECC1L-ADORA2AF8WAN1 911 aa21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 RRAGCQ9HB90 399 aa21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 KRT82Q9NSB4 513 aa21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 KLHL11Q9NVR0 708 aa21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 KIF3CO14782 793 aa21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 GRIN3BO60391 1043 aa21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 MAP3K20Q9NYL2 800 aaKnown RBP21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 CCDC78A2IDD5 438 aa21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 CAPRIN1Q14444 709 aaKnown RBP21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 FAM84BQ96KN1 310 aaPredicted RBP21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 TNS3Q68CZ2 1445 aa21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 EIF3CLB5ME19 914 aaKnown RBP21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 OR1G1P47890 313 aa21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 POU5F1BQ06416 359 aa21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 RNF25Q96BH1 459 aaPredicted RBP21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 EIF3CQ99613 913 aaKnown RBP21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 LINC00301Q8NCQ3 95 aa21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 C11orf70Q9BRQ4 267 aa21.71■■□□□ 1.07
CDC42BPB-201ENST00000361246 PPFIA2O75334 1257 aa21.7■■□□□ 1.07
CDC42BPB-201ENST00000361246 QARSP47897 775 aaKnown RBP21.7■■□□□ 1.07
CDC42BPB-201ENST00000361246 CLNS1AP54105 237 aaKnown RBP21.7■■□□□ 1.07
CDC42BPB-201ENST00000361246 OCRLQ01968 901 aa21.7■■□□□ 1.07
CDC42BPB-201ENST00000361246 CLTAP09496 248 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms