RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C PAC1P39946 494 aaKnown RBP7.67□□□□□ -1.18
SRP54YPR088C YNL195CP40168 261 aa7.67□□□□□ -1.18
SRP54YPR088C BRX1Q08235 291 aaKnown RBP7.67□□□□□ -1.18
SRP54YPR088C TPO4Q12256 659 aa7.67□□□□□ -1.18
SRP54YPR088C HER1Q12276 1246 aa7.67□□□□□ -1.18
SRP54YPR088C APC2Q12440 853 aa7.67□□□□□ -1.18
SRP54YPR088C BRR2P32639 2163 aaKnown RBP7.66□□□□□ -1.18
SRP54YPR088C YSF3P0C074 85 aaPredicted RBP7.66□□□□□ -1.18
SRP54YPR088C YOL162WP0CF19 215 aa7.66□□□□□ -1.18
SRP54YPR088C ENA1P13587 1091 aa7.66□□□□□ -1.18
SRP54YPR088C CDC26P14724 124 aa7.66□□□□□ -1.18
SRP54YPR088C YCR100CP25606 316 aa7.66□□□□□ -1.18
SRP54YPR088C ORC2P32833 620 aa7.66□□□□□ -1.18
SRP54YPR088C SEC61P32915 480 aa7.66□□□□□ -1.18
SRP54YPR088C MAE1P36013 669 aaKnown RBP7.66□□□□□ -1.18
SRP54YPR088C SEA4P38164 1038 aa7.66□□□□□ -1.18
SRP54YPR088C ARN2P38724 620 aa7.66□□□□□ -1.18
SRP54YPR088C YTA6P40328 754 aa7.66□□□□□ -1.18
SRP54YPR088C IRC5P43610 853 aa7.66□□□□□ -1.18
SRP54YPR088C NQM1P53228 333 aaPredicted RBP7.66□□□□□ -1.18
SRP54YPR088C YAT1P80235 687 aa7.66□□□□□ -1.18
SRP54YPR088C ENA2Q01896 1091 aa7.66□□□□□ -1.18
SRP54YPR088C NCE101Q02820 53 aa7.66□□□□□ -1.18
SRP54YPR088C ENA5Q12691 1091 aa7.66□□□□□ -1.18
SRP54YPR088C YIL046W-AQ3E7Z4 54 aa7.66□□□□□ -1.18
SRP54YPR088C DET1Q99288 334 aaKnown RBP7.66□□□□□ -1.18
SRP54YPR088C LYP1P32487 611 aa7.65□□□□□ -1.18
SRP54YPR088C LST4P34239 828 aa7.65□□□□□ -1.18
SRP54YPR088C DHR2P36009 735 aaPredicted RBP7.65□□□□□ -1.18
SRP54YPR088C SNU114P36048 1008 aaKnown RBP7.65□□□□□ -1.18
SRP54YPR088C YIL067CP40514 678 aa7.65□□□□□ -1.18
SRP54YPR088C YLR460CP54007 376 aa7.65□□□□□ -1.18
SRP54YPR088C SEC13Q04491 297 aaKnown RBP7.65□□□□□ -1.18
SRP54YPR088C EMG1Q06287 252 aaKnown RBP7.65□□□□□ -1.18
SRP54YPR088C NOP12Q08208 459 aaKnown RBP7.65□□□□□ -1.18
SRP54YPR088C PNS1Q12412 539 aa7.65□□□□□ -1.18
SRP54YPR088C COX1P00401 534 aa7.64□□□□□ -1.19
SRP54YPR088C DPM1P14020 267 aaKnown RBP7.64□□□□□ -1.19
SRP54YPR088C KGD1P20967 1014 aaKnown RBP7.64□□□□□ -1.19
SRP54YPR088C NAR1P23503 491 aaKnown RBP7.64□□□□□ -1.19
SRP54YPR088C DPB2P24482 689 aaPredicted RBP7.64□□□□□ -1.19
SRP54YPR088C LEM3P42838 414 aa7.64□□□□□ -1.19
SRP54YPR088C IDS2P46958 469 aa7.64□□□□□ -1.19
SRP54YPR088C MDV1P47025 714 aa7.64□□□□□ -1.19
SRP54YPR088C SEH1P53011 349 aaKnown RBP7.64□□□□□ -1.19
SRP54YPR088C LCL3P53153 274 aa7.64□□□□□ -1.19
SRP54YPR088C RBG2P53295 368 aaKnown RBP7.64□□□□□ -1.19
SRP54YPR088C ASI1P54074 624 aa7.64□□□□□ -1.19
SRP54YPR088C SNZ1Q03148 297 aa7.64□□□□□ -1.19
SRP54YPR088C ELP6Q04868 273 aa7.64□□□□□ -1.19
SRP54YPR088C FMP42Q04991 504 aa7.64□□□□□ -1.19
SRP54YPR088C NEJ1Q06148 342 aa7.64□□□□□ -1.19
SRP54YPR088C SYO1Q07395 620 aa7.64□□□□□ -1.19
SRP54YPR088C FMP45Q07651 309 aa7.64□□□□□ -1.19
SRP54YPR088C NTG2Q08214 380 aa7.64□□□□□ -1.19
SRP54YPR088C GSH2Q08220 491 aa7.64□□□□□ -1.19
SRP54YPR088C YOL073CQ08232 322 aa7.64□□□□□ -1.19
SRP54YPR088C UIP4Q08926 304 aa7.64□□□□□ -1.19
SRP54YPR088C SPC3Q12133 184 aa7.64□□□□□ -1.19
SRP54YPR088C PAR32Q12515 295 aaKnown RBP7.64□□□□□ -1.19
SRP54YPR088C CSF1Q12150 2958 aa7.64□□□□□ -1.19
SRP54YPR088C TEC1P18412 486 aa7.63□□□□□ -1.19
SRP54YPR088C YKL077WP36081 392 aa7.63□□□□□ -1.19
SRP54YPR088C BAP2P38084 609 aa7.63□□□□□ -1.19
SRP54YPR088C MCM7P38132 845 aa7.63□□□□□ -1.19
SRP54YPR088C ALG3P38179 458 aa7.63□□□□□ -1.19
SRP54YPR088C RPS20P38701 121 aaKnown RBP7.63□□□□□ -1.19
SRP54YPR088C MDM31P38880 579 aa7.63□□□□□ -1.19
SRP54YPR088C ZRG8P40021 1076 aa7.63□□□□□ -1.19
SRP54YPR088C NTA1P40354 457 aa7.63□□□□□ -1.19
SRP54YPR088C YIL166CP40445 542 aa7.63□□□□□ -1.19
SRP54YPR088C YGL235WP53071 178 aa7.63□□□□□ -1.19
SRP54YPR088C YGL101WP53144 215 aa7.63□□□□□ -1.19
SRP54YPR088C MPA43P53583 542 aaPredicted RBP7.63□□□□□ -1.19
SRP54YPR088C NUP49Q02199 472 aa7.63□□□□□ -1.19
SRP54YPR088C SRL4Q03085 281 aa7.63□□□□□ -1.19
SRP54YPR088C TRS23Q03784 219 aa7.63□□□□□ -1.19
SRP54YPR088C FMP40Q08968 688 aaPredicted RBP7.63□□□□□ -1.19
SRP54YPR088C YDL007C-AQ2V2Q0 85 aa7.63□□□□□ -1.19
SRP54YPR088C ERD2P18414 219 aa7.63□□□□□ -1.19
SRP54YPR088C SNC1P31109 117 aa7.63□□□□□ -1.19
SRP54YPR088C YPT7P32939 208 aa7.63□□□□□ -1.19
SRP54YPR088C WBP1P33767 430 aaKnown RBP7.63□□□□□ -1.19
SRP54YPR088C UBS1P38290 277 aa7.63□□□□□ -1.19
SRP54YPR088C SHR5P41912 237 aa7.63□□□□□ -1.19
SRP54YPR088C QRI7P43122 407 aa7.63□□□□□ -1.19
SRP54YPR088C YJR115WP47152 169 aa7.63□□□□□ -1.19
SRP54YPR088C EFM3P47163 339 aa7.63□□□□□ -1.19
SRP54YPR088C LSG1P53145 640 aaKnown RBP7.63□□□□□ -1.19
SRP54YPR088C PRP3Q03338 469 aaPredicted RBP7.63□□□□□ -1.19
SRP54YPR088C VID22Q05934 901 aa7.63□□□□□ -1.19
SRP54YPR088C RSA3Q05942 220 aaKnown RBP7.63□□□□□ -1.19
SRP54YPR088C YPQ2Q06328 317 aa7.63□□□□□ -1.19
SRP54YPR088C BDS1Q08347 646 aa7.63□□□□□ -1.19
SRP54YPR088C NPC2Q12408 173 aa7.63□□□□□ -1.19
SRP54YPR088C FLP1P03870 423 aa7.62□□□□□ -1.19
SRP54YPR088C DAT1P13483 248 aaKnown RBP7.62□□□□□ -1.19
SRP54YPR088C MDH1P17505 334 aaKnown RBP RIP-Chip data7.62□□□□□ -1.19not detected
SRP54YPR088C STE4P18851 423 aa7.62□□□□□ -1.19
SRP54YPR088C PUP2P32379 260 aa7.62□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms