RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W LRO1P40345 661 aa3.38□□□□□ -1.87
MSD1YPL104W PAC11P40960 533 aa3.38□□□□□ -1.87
MSD1YPL104W YGR201CP42936 225 aa3.38□□□□□ -1.87
MSD1YPL104W CAK1P43568 368 aaPredicted RBP3.38□□□□□ -1.87
MSD1YPL104W PRM8P53174 237 aa3.38□□□□□ -1.87
MSD1YPL104W SWS2P53937 143 aa3.38□□□□□ -1.87
MSD1YPL104W EGD1Q02642 157 aaKnown RBP3.38□□□□□ -1.87
MSD1YPL104W TLG1Q03322 224 aa3.38□□□□□ -1.87
MSD1YPL104W TRM82Q03774 444 aa3.38□□□□□ -1.87
MSD1YPL104W YDR179W-AQ03983 463 aa3.38□□□□□ -1.87
MSD1YPL104W APC4Q04601 652 aa3.38□□□□□ -1.87
MSD1YPL104W BOP2Q06150 570 aa3.38□□□□□ -1.87
MSD1YPL104W ARO10Q06408 635 aa3.38□□□□□ -1.87
MSD1YPL104W PUS9Q12069 462 aa3.38□□□□□ -1.87
MSD1YPL104W DIN7Q12086 430 aa3.38□□□□□ -1.87
MSD1YPL104W MRX4Q12467 430 aa3.38□□□□□ -1.87
MSD1YPL104W ZWF1P11412 505 aaKnown RBP3.38□□□□□ -1.87
MSD1YPL104W DPB2P24482 689 aaPredicted RBP3.38□□□□□ -1.87
MSD1YPL104W RHB1P25378 209 aa3.38□□□□□ -1.87
MSD1YPL104W YJU2P28320 278 aaPredicted RBP3.38□□□□□ -1.87
MSD1YPL104W YIM1P28625 365 aa3.38□□□□□ -1.87
MSD1YPL104W SUI1P32911 108 aaKnown RBP3.38□□□□□ -1.87
MSD1YPL104W OMA1P36163 345 aa3.38□□□□□ -1.87
MSD1YPL104W EHT1P38295 451 aa3.38□□□□□ -1.87
MSD1YPL104W YLF2P38746 405 aa3.38□□□□□ -1.87
MSD1YPL104W UME6P39001 836 aa3.38□□□□□ -1.87
MSD1YPL104W PCF11P39081 626 aaPredicted RBP3.38□□□□□ -1.87
MSD1YPL104W ELO1P39540 310 aa3.38□□□□□ -1.87
MSD1YPL104W SOP4P39543 234 aaPredicted RBP3.38□□□□□ -1.87
MSD1YPL104W YER010CP40011 234 aa3.38□□□□□ -1.87
MSD1YPL104W ZRG8P40021 1076 aa3.38□□□□□ -1.87
MSD1YPL104W TPA1P40032 644 aaKnown RBP3.38□□□□□ -1.87
MSD1YPL104W AVT6P40074 448 aa3.38□□□□□ -1.87
MSD1YPL104W YJL068CP40363 299 aa3.38□□□□□ -1.87
MSD1YPL104W GCN20P43535 752 aaKnown RBP3.38□□□□□ -1.87
MSD1YPL104W MRPL19P53875 158 aa3.38□□□□□ -1.87
MSD1YPL104W TIM10P87108 93 aa3.38□□□□□ -1.87
MSD1YPL104W YPL107WQ02873 248 aa3.38□□□□□ -1.87
MSD1YPL104W RSC9Q03124 581 aa3.38□□□□□ -1.87
MSD1YPL104W RIM13Q03792 727 aa3.38□□□□□ -1.87
MSD1YPL104W YMR310CQ04867 317 aaPredicted RBP3.38□□□□□ -1.87
MSD1YPL104W YFT2Q06676 274 aa3.38□□□□□ -1.87
MSD1YPL104W YOL107WQ12239 342 aa3.38□□□□□ -1.87
MSD1YPL104W YLR126CQ12288 251 aa3.38□□□□□ -1.87
MSD1YPL104W YPL119C-AQ3E751 87 aa3.38□□□□□ -1.87
MSD1YPL104W LAG2Q92325 660 aa3.38□□□□□ -1.87
MSD1YPL104W PNO1Q99216 274 aaKnown RBP3.38□□□□□ -1.87
MSD1YPL104W BEM2P39960 2167 aaKnown RBP3.38□□□□□ -1.87
MSD1YPL104W GAL7P08431 366 aa3.37□□□□□ -1.87
MSD1YPL104W VPS33P20795 691 aa3.37□□□□□ -1.87
MSD1YPL104W PTP1P25044 335 aa3.37□□□□□ -1.87
MSD1YPL104W HCM1P25364 564 aa3.37□□□□□ -1.87
MSD1YPL104W NTH1P32356 751 aa3.37□□□□□ -1.87
MSD1YPL104W GSH1P32477 678 aa3.37□□□□□ -1.87
MSD1YPL104W SKN1P33336 771 aa3.37□□□□□ -1.87
MSD1YPL104W DHR2P36009 735 aaPredicted RBP3.37□□□□□ -1.87
MSD1YPL104W FMP46P36141 133 aaKnown RBP3.37□□□□□ -1.87
MSD1YPL104W ECM4P36156 370 aa3.37□□□□□ -1.87
MSD1YPL104W BIG1P38813 335 aa3.37□□□□□ -1.87
MSD1YPL104W LYS1P38998 373 aaRIP-Chip data3.37□□□□□ -1.87not detected
MSD1YPL104W PRE6P40303 254 aaKnown RBP3.37□□□□□ -1.87
MSD1YPL104W BIT61P47041 543 aa3.37□□□□□ -1.87
MSD1YPL104W RBL2P48606 106 aaKnown RBP3.37□□□□□ -1.87
MSD1YPL104W SHE4P51534 789 aa3.37□□□□□ -1.87
MSD1YPL104W YGR079WP53249 370 aa3.37□□□□□ -1.87
MSD1YPL104W FHN1P53279 174 aa3.37□□□□□ -1.87
MSD1YPL104W SNF12P53628 566 aa3.37□□□□□ -1.87
MSD1YPL104W YNR071CP53757 342 aa3.37□□□□□ -1.87
MSD1YPL104W CSL4P53859 292 aaPredicted RBP3.37□□□□□ -1.87
MSD1YPL104W RHO4Q00246 291 aa3.37□□□□□ -1.87
MSD1YPL104W ACS1Q01574 713 aa3.37□□□□□ -1.87
MSD1YPL104W SED5Q01590 340 aa3.37□□□□□ -1.87
MSD1YPL104W YML096WQ04489 525 aa3.37□□□□□ -1.87
MSD1YPL104W SNO4Q04902 237 aa3.37□□□□□ -1.87
MSD1YPL104W FMP42Q04991 504 aa3.37□□□□□ -1.87
MSD1YPL104W RQC1Q05468 723 aaKnown RBP3.37□□□□□ -1.87
MSD1YPL104W YLR352WQ06479 807 aa3.37□□□□□ -1.87
MSD1YPL104W DCI1Q08558 271 aa3.37□□□□□ -1.87
MSD1YPL104W HSP33Q08914 237 aaKnown RBP3.37□□□□□ -1.87
MSD1YPL104W HSP32Q08992 237 aa3.37□□□□□ -1.87
MSD1YPL104W HER1Q12276 1246 aa3.37□□□□□ -1.87
MSD1YPL104W RRP12Q12754 1228 aaKnown RBP3.37□□□□□ -1.87
MSD1YPL104W YKL033W-AQ86ZR7 236 aa3.37□□□□□ -1.87
MSD1YPL104W PET9P18239 318 aaKnown RBP3.36□□□□□ -1.87
MSD1YPL104W MGR1P25573 417 aa3.36□□□□□ -1.87
MSD1YPL104W TAH1P25638 111 aaPredicted RBP3.36□□□□□ -1.87
MSD1YPL104W IDH1P28834 360 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
MSD1YPL104W RPN2P32565 945 aaKnown RBP3.36□□□□□ -1.87
MSD1YPL104W SRB5P32585 307 aa3.36□□□□□ -1.87
MSD1YPL104W VMA8P32610 256 aaKnown RBP3.36□□□□□ -1.87
MSD1YPL104W SFA1P32771 386 aa3.36□□□□□ -1.87
MSD1YPL104W CDC13P32797 924 aaKnown RBP3.36□□□□□ -1.87
MSD1YPL104W TEF4P36008 412 aaKnown RBP3.36□□□□□ -1.87
MSD1YPL104W TUL1P36096 758 aa3.36□□□□□ -1.87
MSD1YPL104W PTC7P38797 343 aa3.36□□□□□ -1.87
MSD1YPL104W RCY1P39531 840 aa3.36□□□□□ -1.87
MSD1YPL104W PZF1P39933 429 aa3.36□□□□□ -1.87
MSD1YPL104W ISC1P40015 477 aaKnown RBP3.36□□□□□ -1.87
MSD1YPL104W KRE29P40026 464 aa3.36□□□□□ -1.87
MSD1YPL104W HOC1P47124 396 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms