RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C AXL2P38928 823 aa3.79□□□□□ -1.8
SNF8YPL002C FRT2P39734 528 aa3.79□□□□□ -1.8
SNF8YPL002C HAT2P39984 401 aa3.79□□□□□ -1.8
SNF8YPL002C AXL1P40851 1208 aa3.79□□□□□ -1.8
SNF8YPL002C PAC11P40960 533 aa3.79□□□□□ -1.8
SNF8YPL002C GCN20P43535 752 aaKnown RBP3.79□□□□□ -1.8
SNF8YPL002C LOC1P43586 204 aaPredicted RBP3.79□□□□□ -1.8
SNF8YPL002C IRC6P43615 237 aa3.79□□□□□ -1.8
SNF8YPL002C BIO3P50277 480 aa3.79□□□□□ -1.8
SNF8YPL002C SEH1P53011 349 aaKnown RBP3.79□□□□□ -1.8
SNF8YPL002C CLD1P53264 445 aa3.79□□□□□ -1.8
SNF8YPL002C MEP3P53390 489 aa3.79□□□□□ -1.8
SNF8YPL002C DCP2P53550 970 aaKnown RBP3.79□□□□□ -1.8
SNF8YPL002C MOT3P54785 490 aaKnown RBP3.79□□□□□ -1.8
SNF8YPL002C ACS1Q01574 713 aa3.79□□□□□ -1.8
SNF8YPL002C DIG1Q03063 452 aaKnown RBP3.79□□□□□ -1.8
SNF8YPL002C NHP10Q03435 203 aa3.79□□□□□ -1.8
SNF8YPL002C RRP17Q04031 235 aaPredicted RBP3.79□□□□□ -1.8
SNF8YPL002C TAF11Q04226 346 aa3.79□□□□□ -1.8
SNF8YPL002C DPB4Q04603 196 aaKnown RBP3.79□□□□□ -1.8
SNF8YPL002C IMA2Q08295 589 aa3.79□□□□□ -1.8
SNF8YPL002C RCN2Q12044 265 aa3.79□□□□□ -1.8
SNF8YPL002C YPR022CQ12139 1133 aa3.79□□□□□ -1.8
SNF8YPL002C PST1Q12355 444 aa3.79□□□□□ -1.8
SNF8YPL002C RMD5Q12508 421 aa3.79□□□□□ -1.8
SNF8YPL002C YER175W-AQ8TGU4 54 aa3.79□□□□□ -1.8
SNF8YPL002C STE2D6VTK4 431 aa3.78□□□□□ -1.8
SNF8YPL002C PEP5P12868 1029 aa3.78□□□□□ -1.8
SNF8YPL002C CNA1P23287 553 aa3.78□□□□□ -1.8
SNF8YPL002C RER1P25560 188 aa3.78□□□□□ -1.8
SNF8YPL002C PUP2P32379 260 aa3.78□□□□□ -1.8
SNF8YPL002C HXT1P32465 570 aa3.78□□□□□ -1.8
SNF8YPL002C ERG1P32476 496 aaKnown RBP3.78□□□□□ -1.8
SNF8YPL002C GSH1P32477 678 aa3.78□□□□□ -1.8
SNF8YPL002C VPS17P32913 551 aa3.78□□□□□ -1.8
SNF8YPL002C NIC96P34077 839 aa3.78□□□□□ -1.8
SNF8YPL002C HES1P35843 434 aa3.78□□□□□ -1.8
SNF8YPL002C KKQ8P36004 724 aa3.78□□□□□ -1.8
SNF8YPL002C RSM22P36056 628 aa3.78□□□□□ -1.8
SNF8YPL002C MRPL10P36520 322 aa3.78□□□□□ -1.8
SNF8YPL002C ASC1P38011 319 aaKnown RBP3.78□□□□□ -1.8
SNF8YPL002C YBR062CP38239 180 aa3.78□□□□□ -1.8
SNF8YPL002C TCD1P38756 429 aa3.78□□□□□ -1.8
SNF8YPL002C LNP1P38878 278 aa3.78□□□□□ -1.8
SNF8YPL002C GGC1P38988 300 aa3.78□□□□□ -1.8
SNF8YPL002C YHB1P39676 399 aaKnown RBP3.78□□□□□ -1.8
SNF8YPL002C NPT1P39683 429 aaKnown RBP3.78□□□□□ -1.8
SNF8YPL002C NOP16P40007 231 aaKnown RBP3.78□□□□□ -1.8
SNF8YPL002C PKP1P40530 394 aa3.78□□□□□ -1.8
SNF8YPL002C RPL10P41805 221 aaKnown RBP3.78□□□□□ -1.8
SNF8YPL002C YRB1P41920 201 aaKnown RBP3.78□□□□□ -1.8
SNF8YPL002C MDE1P47095 244 aa3.78□□□□□ -1.8
SNF8YPL002C RBG2P53295 368 aaKnown RBP3.78□□□□□ -1.8
SNF8YPL002C SPP2Q02521 185 aa3.78□□□□□ -1.8
SNF8YPL002C NUP116Q02630 1113 aa3.78□□□□□ -1.8
SNF8YPL002C SPO19Q03029 223 aa3.78□□□□□ -1.8
SNF8YPL002C ECM11Q04110 302 aa3.78□□□□□ -1.8
SNF8YPL002C MGR3Q04472 501 aa3.78□□□□□ -1.8
SNF8YPL002C GLO2Q05584 274 aa3.78□□□□□ -1.8
SNF8YPL002C VPS38Q05919 439 aa3.78□□□□□ -1.8
SNF8YPL002C FAR10Q06001 478 aa3.78□□□□□ -1.8
SNF8YPL002C SLD7Q08457 257 aa3.78□□□□□ -1.8
SNF8YPL002C RTC5Q12108 567 aaKnown RBP3.78□□□□□ -1.8
SNF8YPL002C YPR011CQ12251 326 aa3.78□□□□□ -1.8
SNF8YPL002C RRP42Q12277 265 aaPredicted RBP3.78□□□□□ -1.8
SNF8YPL002C RRI1Q12468 440 aa3.78□□□□□ -1.8
SNF8YPL002C BLM10P43583 2143 aa3.77□□□□□ -1.81
SNF8YPL002C ARG4P04076 463 aaPredicted RBP3.77□□□□□ -1.81
SNF8YPL002C HXK2P04807 486 aaKnown RBP3.77□□□□□ -1.81
SNF8YPL002C STE3P06783 470 aa3.77□□□□□ -1.81
SNF8YPL002C GCD2P12754 651 aaPredicted RBP3.77□□□□□ -1.81
SNF8YPL002C HSP26P15992 214 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
SNF8YPL002C PWP1P21304 576 aaKnown RBP3.77□□□□□ -1.81
SNF8YPL002C MGT1P26188 188 aa3.77□□□□□ -1.81
SNF8YPL002C ZIP1P31111 875 aa3.77□□□□□ -1.81
SNF8YPL002C SUI1P32911 108 aaKnown RBP3.77□□□□□ -1.81
SNF8YPL002C ICE2P40499 491 aa3.77□□□□□ -1.81
SNF8YPL002C SEC28P40509 296 aaKnown RBP3.77□□□□□ -1.81
SNF8YPL002C AZF1P41696 914 aa3.77□□□□□ -1.81
SNF8YPL002C YFL012WP43580 148 aa3.77□□□□□ -1.81
SNF8YPL002C BOL2P53082 120 aa3.77□□□□□ -1.81
SNF8YPL002C ROG1P53118 685 aa3.77□□□□□ -1.81
SNF8YPL002C CGR1P53188 120 aa3.77□□□□□ -1.81
SNF8YPL002C PDR16P53860 351 aaKnown RBP3.77□□□□□ -1.81
SNF8YPL002C MRPL19P53875 158 aa3.77□□□□□ -1.81
SNF8YPL002C OAZ1Q02803 292 aa3.77□□□□□ -1.81
SNF8YPL002C MTG1Q03151 367 aaPredicted RBP3.77□□□□□ -1.81
SNF8YPL002C YMR114CQ04471 368 aaKnown RBP3.77□□□□□ -1.81
SNF8YPL002C YTH1Q06102 208 aaPredicted RBP3.77□□□□□ -1.81
SNF8YPL002C PAR32Q12515 295 aaKnown RBP3.77□□□□□ -1.81
SNF8YPL002C SEC53P07283 254 aaKnown RBP3.76□□□□□ -1.81
SNF8YPL002C RAD57P25301 460 aa3.76□□□□□ -1.81
SNF8YPL002C YIM1P28625 365 aa3.76□□□□□ -1.81
SNF8YPL002C PAP1P29468 568 aaKnown RBP3.76□□□□□ -1.81
SNF8YPL002C HMX1P32339 317 aa3.76□□□□□ -1.81
SNF8YPL002C DOA4P32571 926 aa3.76□□□□□ -1.81
SNF8YPL002C MDL1P33310 695 aa3.76□□□□□ -1.81
SNF8YPL002C SDH3P33421 198 aa3.76□□□□□ -1.81
SNF8YPL002C NUF2P33895 451 aa3.76□□□□□ -1.81
SNF8YPL002C MSG5P38590 489 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms