RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W CRT10Q08226 957 aa7.83□□□□□ -1.16
AMF1YOR378W PST2Q12335 198 aaKnown RBP7.83□□□□□ -1.16
AMF1YOR378W IRA2P19158 3079 aa7.82□□□□□ -1.16
AMF1YOR378W YPT1P01123 206 aaKnown RBP7.82□□□□□ -1.16
AMF1YOR378W RIP1P08067 215 aa7.82□□□□□ -1.16
AMF1YOR378W ARC19P33204 171 aaKnown RBP7.82□□□□□ -1.16
AMF1YOR378W ECM15P35195 104 aa7.82□□□□□ -1.16
AMF1YOR378W GOS1P38736 223 aa7.82□□□□□ -1.16
AMF1YOR378W APE4P38821 490 aa7.82□□□□□ -1.16
AMF1YOR378W PEX18P38855 283 aa7.82□□□□□ -1.16
AMF1YOR378W ALP1P38971 573 aa7.82□□□□□ -1.16
AMF1YOR378W YNL195CP40168 261 aa7.82□□□□□ -1.16
AMF1YOR378W BAP3P41815 604 aa7.82□□□□□ -1.16
AMF1YOR378W SHR5P41912 237 aa7.82□□□□□ -1.16
AMF1YOR378W SNO3P43544 222 aa7.82□□□□□ -1.16
AMF1YOR378W EXG2P52911 562 aa7.82□□□□□ -1.16
AMF1YOR378W MPA43P53583 542 aaPredicted RBP7.82□□□□□ -1.16
AMF1YOR378W COS1P53822 381 aa7.82□□□□□ -1.16
AMF1YOR378W NOP12Q08208 459 aaKnown RBP7.82□□□□□ -1.16
AMF1YOR378W FMP40Q08968 688 aaPredicted RBP7.82□□□□□ -1.16
AMF1YOR378W TPO4Q12256 659 aa7.82□□□□□ -1.16
AMF1YOR378W APC2Q12440 853 aa7.82□□□□□ -1.16
AMF1YOR378W YOS9Q99220 542 aa7.82□□□□□ -1.16
AMF1YOR378W RPP2BP02400 110 aaKnown RBP7.81□□□□□ -1.16
AMF1YOR378W CAR2P07991 424 aaKnown RBP7.81□□□□□ -1.16
AMF1YOR378W YOL162WP0CF19 215 aa7.81□□□□□ -1.16
AMF1YOR378W SAM35P14693 329 aa7.81□□□□□ -1.16
AMF1YOR378W AVT6P40074 448 aa7.81□□□□□ -1.16
AMF1YOR378W YTA6P40328 754 aa7.81□□□□□ -1.16
AMF1YOR378W HMS2P47175 358 aa7.81□□□□□ -1.16
AMF1YOR378W FRE7Q12333 620 aa7.81□□□□□ -1.16
AMF1YOR378W PRP46Q12417 451 aaPredicted RBP7.81□□□□□ -1.16
AMF1YOR378W DET1Q99288 334 aaKnown RBP7.81□□□□□ -1.16
AMF1YOR378W FLP1P03870 423 aa7.8□□□□□ -1.16
AMF1YOR378W SNF6P18888 332 aa7.8□□□□□ -1.16
AMF1YOR378W VMA6P32366 345 aaKnown RBP7.8□□□□□ -1.16
AMF1YOR378W PUP2P32379 260 aa7.8□□□□□ -1.16
AMF1YOR378W YPT7P32939 208 aa7.8□□□□□ -1.16
AMF1YOR378W IPT1P38954 527 aa7.8□□□□□ -1.16
AMF1YOR378W CIN1P40987 1014 aa7.8□□□□□ -1.16
AMF1YOR378W RET2P43621 546 aa7.8□□□□□ -1.16
AMF1YOR378W LSG1P53145 640 aaKnown RBP7.8□□□□□ -1.16
AMF1YOR378W SEC13Q04491 297 aaKnown RBP7.8□□□□□ -1.16
AMF1YOR378W SYO1Q07395 620 aa7.8□□□□□ -1.16
AMF1YOR378W AKR2Q12013 749 aa7.8□□□□□ -1.16
AMF1YOR378W TRM10Q12400 293 aa7.8□□□□□ -1.16
AMF1YOR378W NPC2Q12408 173 aa7.8□□□□□ -1.16
AMF1YOR378W DAT1P13483 248 aaKnown RBP7.79□□□□□ -1.16
AMF1YOR378W ERD2P18414 219 aa7.79□□□□□ -1.16
AMF1YOR378W YCR100CP25606 316 aa7.79□□□□□ -1.16
AMF1YOR378W CWH43P25618 953 aa7.79□□□□□ -1.16
AMF1YOR378W OAC1P32332 324 aa7.79□□□□□ -1.16
AMF1YOR378W EMP70P32802 667 aa7.79□□□□□ -1.16
AMF1YOR378W ECM4P36156 370 aa7.79□□□□□ -1.16
AMF1YOR378W YBR139WP38109 508 aa7.79□□□□□ -1.16
AMF1YOR378W MCM7P38132 845 aa7.79□□□□□ -1.16
AMF1YOR378W NSG1P38837 291 aa7.79□□□□□ -1.16
AMF1YOR378W KRE29P40026 464 aa7.79□□□□□ -1.16
AMF1YOR378W YER158CP40095 573 aa7.79□□□□□ -1.16
AMF1YOR378W YIL166CP40445 542 aa7.79□□□□□ -1.16
AMF1YOR378W IDS2P46958 469 aa7.79□□□□□ -1.16
AMF1YOR378W PAL1Q05518 499 aaKnown RBP7.79□□□□□ -1.16
AMF1YOR378W MDM30Q05930 598 aa7.79□□□□□ -1.16
AMF1YOR378W YLR446WQ06204 433 aa7.79□□□□□ -1.16
AMF1YOR378W UIP4Q08926 304 aa7.79□□□□□ -1.16
AMF1YOR378W SIA1Q12212 622 aa7.79□□□□□ -1.16
AMF1YOR378W HSP42Q12329 375 aa7.79□□□□□ -1.16
AMF1YOR378W HAA1Q12753 694 aaKnown RBP7.79□□□□□ -1.16
AMF1YOR378W TAD3Q9URQ3 322 aa7.79□□□□□ -1.16
AMF1YOR378W CSF1Q12150 2958 aa7.79□□□□□ -1.16
AMF1YOR378W MET17P06106 444 aa7.78□□□□□ -1.16
AMF1YOR378W ARF1P11076 181 aaKnown RBP7.78□□□□□ -1.16
AMF1YOR378W DPM1P14020 267 aaKnown RBP7.78□□□□□ -1.16
AMF1YOR378W TAL1P15019 335 aaKnown RBP7.78□□□□□ -1.16
AMF1YOR378W IDP1P21954 428 aaKnown RBP7.78□□□□□ -1.16
AMF1YOR378W RPS5P26783 225 aaKnown RBP7.78□□□□□ -1.16
AMF1YOR378W SNC1P31109 117 aa7.78□□□□□ -1.16
AMF1YOR378W ARN2P38724 620 aa7.78□□□□□ -1.16
AMF1YOR378W IRC6P43615 237 aa7.78□□□□□ -1.16
AMF1YOR378W YGL101WP53144 215 aa7.78□□□□□ -1.16
AMF1YOR378W ASI1P54074 624 aa7.78□□□□□ -1.16
AMF1YOR378W GRX5Q02784 150 aa7.78□□□□□ -1.16
AMF1YOR378W TFB3Q03290 321 aa7.78□□□□□ -1.16
AMF1YOR378W YDR179W-AQ03983 463 aa7.78□□□□□ -1.16
AMF1YOR378W ARP10Q04549 284 aa7.78□□□□□ -1.16
AMF1YOR378W SPC3Q12133 184 aa7.78□□□□□ -1.16
AMF1YOR378W YDL007C-AQ2V2Q0 85 aa7.78□□□□□ -1.16
AMF1YOR378W DFG16Q99234 619 aa7.78□□□□□ -1.16
AMF1YOR378W VCX1Q99385 411 aa7.78□□□□□ -1.16
AMF1YOR378W NCP1P16603 691 aaKnown RBP7.78□□□□□ -1.16
AMF1YOR378W LYP1P32487 611 aa7.78□□□□□ -1.16
AMF1YOR378W MDL1P33310 695 aa7.78□□□□□ -1.16
AMF1YOR378W YKL077WP36081 392 aa7.78□□□□□ -1.16
AMF1YOR378W YKR015CP36111 568 aa7.78□□□□□ -1.16
AMF1YOR378W RRP4P38792 359 aaKnown RBP7.78□□□□□ -1.16
AMF1YOR378W HRB1P38922 454 aaKnown RBP RIP-Chip data7.78□□□□□ -1.16not detected
AMF1YOR378W MDE1P47095 244 aa7.78□□□□□ -1.16
AMF1YOR378W OCA1P50946 238 aaPredicted RBP7.78□□□□□ -1.16
AMF1YOR378W YGL235WP53071 178 aa7.78□□□□□ -1.16
AMF1YOR378W SNZ1Q03148 297 aa7.78□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 119.6 ms