RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP1	YOL006C	RAD52	P06778	471 aa	Known RBP	3.13	□□□□□ -1.91
TOP1	YOL006C	CHO1	P08456	276 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	ARF1	P11076	181 aa	Known RBP	3.13	□□□□□ -1.91
TOP1	YOL006C	KAR4	P25583	335 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	SKN1	P33336	771 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	YOX1	P34161	385 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	APL3	P38065	1025 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	ACO2	P39533	789 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	HAT2	P39984	401 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	VAB2	P40003	282 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	SHO1	P40073	367 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	SOK1	P40317	901 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	PYK2	P52489	506 aa	Known RBP	3.13	□□□□□ -1.91
TOP1	YOL006C	OKP1	P53298	406 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	YIF1	P53845	314 aa	Known RBP	3.13	□□□□□ -1.91
TOP1	YOL006C	SED5	Q01590	340 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	YVH1	Q02256	364 aa	Known RBP	3.13	□□□□□ -1.91
TOP1	YOL006C	GIS1	Q03833	894 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	PBP4	Q07362	185 aa	Known RBP	3.13	□□□□□ -1.91
TOP1	YOL006C	YDL114W	Q07530	308 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	YEH2	Q07950	538 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	ESA1	Q08649	445 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	YOR387C	Q08910	206 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	USV1	Q12132	391 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	YLL056C	Q12177	298 aa		3.13	□□□□□ -1.91
TOP1	YOL006C	HIS4	P00815	799 aa	Known RBP	3.12	□□□□□ -1.91
TOP1	YOL006C	ATP6	P00854	259 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	AI3	P03877	415 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	STE4	P18851	423 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	YAP1	P19880	650 aa	Known RBP	3.12	□□□□□ -1.91
TOP1	YOL006C	RPB8	P20436	146 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	RNR3	P21672	869 aa	Known RBP	3.12	□□□□□ -1.91
TOP1	YOL006C	PTP1	P25044	335 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	MNS1	P32906	549 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	SRP14	P38985	146 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	TRS85	P46944	698 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	AZR1	P50080	613 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	MUP1	P50276	574 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	YGR151C	P53287	111 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	MKC7	P53379	596 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	ERG5	P54781	538 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	YDC1	Q02896	317 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	PFA5	Q03289	374 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	GCN5	Q03330	439 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	SNU56	Q03782	492 aa	Known RBP	3.12	□□□□□ -1.91
TOP1	YOL006C	CAC2	Q04199	468 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	YPR147C	Q06522	304 aa	Known RBP	3.12	□□□□□ -1.91
TOP1	YOL006C	DDC1	Q08949	612 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	APC9	Q12107	265 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	ATG34	Q12292	412 aa		3.12	□□□□□ -1.91
TOP1	YOL006C	MES1	P00958	751 aa	Known RBP	3.11	□□□□□ -1.91
TOP1	YOL006C	SIR3	P06701	978 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	CDC6	P09119	513 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	FUN19	P28003	413 aa	Predicted RBP	3.11	□□□□□ -1.91
TOP1	YOL006C	NUP2	P32499	720 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	VAM7	P32912	316 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	PPZ2	P33329	710 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	SWD2	P36104	329 aa	Predicted RBP	3.11	□□□□□ -1.91
TOP1	YOL006C	MRX3	P38172	270 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	IKI1	P38874	309 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	CCT4	P39078	528 aa	Known RBP	3.11	□□□□□ -1.91
TOP1	YOL006C	YAL037W	P39728	267 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	ISC1	P40015	477 aa	Known RBP	3.11	□□□□□ -1.91
TOP1	YOL006C	DDI1	P40087	428 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	MMF1	P40185	145 aa	Known RBP	3.11	□□□□□ -1.91
TOP1	YOL006C	RTT101	P47050	842 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	YPT32	P51996	222 aa	Known RBP	3.11	□□□□□ -1.91
TOP1	YOL006C	NMA2	P53204	395 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	VPS62	P53285	467 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	YTP1	P53584	459 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	YPL080C	Q02826	108 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	YDR387C	Q04162	555 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	MED7	Q08278	222 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	CSM4	Q08955	156 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	LPX1	Q12405	387 aa	Known RBP	3.11	□□□□□ -1.91
TOP1	YOL006C	LSO2	Q3E772	92 aa	Known RBP	3.11	□□□□□ -1.91
TOP1	YOL006C	SEC3	P33332	1336 aa	Known RBP	3.11	□□□□□ -1.91
TOP1	YOL006C	MRP2	P10663	115 aa	Predicted RBP	3.11	□□□□□ -1.91
TOP1	YOL006C	TKL1	P23254	680 aa	Known RBP	3.11	□□□□□ -1.91
TOP1	YOL006C	SAC1	P32368	623 aa	Known RBP	3.11	□□□□□ -1.91
TOP1	YOL006C	APE2	P32454	952 aa	Known RBP	3.11	□□□□□ -1.91
TOP1	YOL006C	CDC13	P32797	924 aa	Known RBP	3.11	□□□□□ -1.91
TOP1	YOL006C	SUL1	P38359	859 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	TDA11	P38854	504 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	ATG7	P38862	630 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	RSM25	P40496	264 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	TAD2	P47058	250 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	TOS2	P50078	622 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	NIF3	P53081	288 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	ERG13	P54839	491 aa	Known RBP	3.11	□□□□□ -1.91
TOP1	YOL006C	IRC13	Q08630	104 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	SET6	Q12529	373 aa		3.11	□□□□□ -1.91
TOP1	YOL006C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
TOP1	YOL006C	RPP0	P05317	312 aa	Known RBP	3.1	□□□□□ -1.91
TOP1	YOL006C	RNA15	P25299	296 aa	Predicted RBP	3.1	□□□□□ -1.91
TOP1	YOL006C	SAT4	P25333	603 aa	Known RBP	3.1	□□□□□ -1.91
TOP1	YOL006C	CHA1	P25379	360 aa	Known RBP	3.1	□□□□□ -1.91
TOP1	YOL006C	ACB1	P31787	87 aa		3.1	□□□□□ -1.91
TOP1	YOL006C	PRS2	P38620	318 aa	Known RBP	3.1	□□□□□ -1.91
TOP1	YOL006C	ARP1	P38696	384 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms