RNA–Protein interactions for RNA: YNL248C

RPA49, Transcript of RNA polymerase I subunit A49, yeast

Gene RPA49, Length 1,248 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPA49	YNL248C	EHT1	P38295	451 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	YHK8	P38776	514 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	VMA22	P38784	181 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	MBP1	P39678	833 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	AIM10	P39965	576 aa	Known RBP	4.88	□□□□□ -1.63
RPA49	YNL248C	PCL6	P40038	420 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	FMC1	P40491	155 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	PSA1	P41940	361 aa	Known RBP	4.88	□□□□□ -1.63
RPA49	YNL248C	NUP57	P48837	541 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	COQ5	P49017	307 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	SYF2	P53277	215 aa	Predicted RBP	4.88	□□□□□ -1.63
RPA49	YNL248C	DBP6	P53734	629 aa	Known RBP	4.88	□□□□□ -1.63
RPA49	YNL248C	YNR061C	P53747	219 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	RHO4	Q00246	291 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	FDC1	Q03034	503 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	MTQ2	Q03920	221 aa	Predicted RBP	4.88	□□□□□ -1.63
RPA49	YNL248C	RQC1	Q05468	723 aa	Known RBP	4.88	□□□□□ -1.63
RPA49	YNL248C	RRP15	Q06511	250 aa	Predicted RBP	4.88	□□□□□ -1.63
RPA49	YNL248C	FDH1	Q08911	376 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	PFA4	Q12006	378 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	PUS9	Q12069	462 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	NAG1	Q8TGN9	163 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	HIS5	P07172	385 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	PHO4	P07270	312 aa	Known RBP	4.87	□□□□□ -1.63
RPA49	YNL248C	GCD1	P09032	578 aa	Predicted RBP	4.87	□□□□□ -1.63
RPA49	YNL248C	THR1	P17423	357 aa	Known RBP	4.87	□□□□□ -1.63
RPA49	YNL248C	SCL1	P21243	252 aa	Known RBP	4.87	□□□□□ -1.63
RPA49	YNL248C	DBF2	P22204	572 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	NPR1	P22211	790 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	MGR1	P25573	417 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	IMG2	P25642	146 aa	Predicted RBP	4.87	□□□□□ -1.63
RPA49	YNL248C	OAR1	P35731	278 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	RCN1	P36054	211 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	RSM22	P36056	628 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	YBR063C	P38083	404 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	EXO84	P38261	753 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	PLB1	P39105	664 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	RTT105	P40063	208 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	RPL10	P41805	221 aa	Known RBP	4.87	□□□□□ -1.63
RPA49	YNL248C	ZIM17	P42844	174 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	CHA4	P43634	648 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	YJL049W	P47048	450 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	BPL1	P48445	690 aa	Predicted RBP	4.87	□□□□□ -1.63
RPA49	YNL248C	RPS12	P48589	143 aa	Known RBP	4.87	□□□□□ -1.63
RPA49	YNL248C	IMD4	P50094	524 aa	Known RBP	4.87	□□□□□ -1.63
RPA49	YNL248C	UBC9	P50623	157 aa	Predicted RBP	4.87	□□□□□ -1.63
RPA49	YNL248C	MAL11	P53048	616 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	MEP3	P53390	489 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	TDA7	P53882	636 aa	Predicted RBP	4.87	□□□□□ -1.63
RPA49	YNL248C	YDR514C	Q04408	483 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	NAT4	Q04751	285 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	YPS7	Q06325	596 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	GPN3	Q06543	272 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	YLR040C	Q07988	224 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	XYL2	Q07993	356 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	YPL199C	Q08954	240 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	SCM3	Q12334	223 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	YDL007C-A	Q2V2Q0	85 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	SUS1	Q6WNK7	96 aa		4.87	□□□□□ -1.63
RPA49	YNL248C	YOL163W	P0CF20	169 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	APN1	P22936	367 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	CHA1	P25379	360 aa	Known RBP	4.86	□□□□□ -1.63
RPA49	YNL248C	YKL097C	P34245	136 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	PIM1	P36775	1133 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	BAP2	P38084	609 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	IRC7	P43623	340 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	YAE1	P47118	141 aa	Predicted RBP	4.86	□□□□□ -1.63
RPA49	YNL248C	BAT2	P47176	376 aa	Known RBP	4.86	□□□□□ -1.63
RPA49	YNL248C	DIE2	P50076	525 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	SPT20	P50875	604 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	EXG2	P52911	562 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	ARO8	P53090	500 aa	Known RBP	4.86	□□□□□ -1.63
RPA49	YNL248C	HOS2	P53096	452 aa	Predicted RBP	4.86	□□□□□ -1.63
RPA49	YNL248C	VPS73	P53142	486 aa	Known RBP	4.86	□□□□□ -1.63
RPA49	YNL248C	MPC1	P53157	130 aa	Known RBP	4.86	□□□□□ -1.63
RPA49	YNL248C	CDH1	P53197	566 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	YGR250C	P53316	781 aa	Known RBP	4.86	□□□□□ -1.63
RPA49	YNL248C	MNT4	P53745	580 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	YAT1	P80235	687 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	YKR011C	Q02209	353 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	YPL068C	Q02749	293 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	YPL113C	Q02961	396 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	YMR310C	Q04867	317 aa	Predicted RBP	4.86	□□□□□ -1.63
RPA49	YNL248C	RGC1	Q06108	1083 aa	Known RBP	4.86	□□□□□ -1.63
RPA49	YNL248C	ORM2	Q06144	216 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	SKI7	Q08491	747 aa	Predicted RBP	4.86	□□□□□ -1.63
RPA49	YNL248C	YDR061W	Q12298	539 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	HSP42	Q12329	375 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	RKM5	Q12367	367 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	PCL9	Q12477	304 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	YKL033W-A	Q86ZR7	236 aa		4.86	□□□□□ -1.63
RPA49	YNL248C	YEL009C-A	A0A023PZF2	135 aa		4.85	□□□□□ -1.63
RPA49	YNL248C	CAR2	P07991	424 aa	Known RBP	4.85	□□□□□ -1.63
RPA49	YNL248C	RPB5	P20434	215 aa		4.85	□□□□□ -1.63
RPA49	YNL248C	SAR1	P20606	190 aa	Known RBP	4.85	□□□□□ -1.63
RPA49	YNL248C	BUB3	P26449	341 aa		4.85	□□□□□ -1.63
RPA49	YNL248C	SSH4	P32343	579 aa		4.85	□□□□□ -1.63
RPA49	YNL248C	SPT14	P32363	452 aa		4.85	□□□□□ -1.63
RPA49	YNL248C	CDC12	P32468	407 aa	Known RBP	4.85	□□□□□ -1.63
RPA49	YNL248C	RML2	P32611	393 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 61.9 ms