RNA–Protein interactions for RNA: YNL236W

SIN4, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SIN4, Length 2,925 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIN4	YNL236W	VTH1	P40438	1549 aa		3.2	□□□□□ -1.9
SIN4	YNL236W	VTH2	P40890	1549 aa		3.2	□□□□□ -1.9
SIN4	YNL236W	UTR1	P21373	530 aa		3.2	□□□□□ -1.9
SIN4	YNL236W	ERG1	P32476	496 aa	Known RBP	3.2	□□□□□ -1.9
SIN4	YNL236W	IMP3	P32899	183 aa	Predicted RBP	3.2	□□□□□ -1.9
SIN4	YNL236W	ATG7	P38862	630 aa		3.2	□□□□□ -1.9
SIN4	YNL236W	PET100	P38958	111 aa		3.2	□□□□□ -1.9
SIN4	YNL236W	DHH1	P39517	506 aa	Known RBP	3.2	□□□□□ -1.9
SIN4	YNL236W	FHL1	P39521	936 aa		3.2	□□□□□ -1.9
SIN4	YNL236W	AIM10	P39965	576 aa	Known RBP	3.2	□□□□□ -1.9
SIN4	YNL236W	YMR134W	P40207	237 aa		3.2	□□□□□ -1.9
SIN4	YNL236W	KEL2	P50090	882 aa		3.2	□□□□□ -1.9
SIN4	YNL236W	AVT4	P50944	713 aa		3.2	□□□□□ -1.9
SIN4	YNL236W	PRP46	Q12417	451 aa	Predicted RBP	3.2	□□□□□ -1.9
SIN4	YNL236W	AHC1	Q12433	566 aa		3.2	□□□□□ -1.9
SIN4	YNL236W	CSR2	Q12734	1121 aa		3.2	□□□□□ -1.9
SIN4	YNL236W	SNQ2	P32568	1501 aa	Known RBP	3.19	□□□□□ -1.9
SIN4	YNL236W	SSK22	P25390	1331 aa	Predicted RBP	3.19	□□□□□ -1.9
SIN4	YNL236W	RPB4	P20433	221 aa	Predicted RBP	3.19	□□□□□ -1.9
SIN4	YNL236W	MRPL8	P22353	238 aa		3.19	□□□□□ -1.9
SIN4	YNL236W	ITR1	P30605	584 aa		3.19	□□□□□ -1.9
SIN4	YNL236W	TMT1	P32643	299 aa		3.19	□□□□□ -1.9
SIN4	YNL236W	SKG6	P32900	734 aa	Predicted RBP	3.19	□□□□□ -1.9
SIN4	YNL236W	GEP4	P38812	185 aa		3.19	□□□□□ -1.9
SIN4	YNL236W	SHO1	P40073	367 aa		3.19	□□□□□ -1.9
SIN4	YNL236W	SPP2	Q02521	185 aa		3.19	□□□□□ -1.9
SIN4	YNL236W	HER2	Q03557	464 aa		3.19	□□□□□ -1.9
SIN4	YNL236W	CCE1	Q03702	353 aa		3.19	□□□□□ -1.9
SIN4	YNL236W	RVB1	Q03940	463 aa	Known RBP	3.19	□□□□□ -1.9
SIN4	YNL236W	COX20	Q04935	205 aa		3.19	□□□□□ -1.9
SIN4	YNL236W	CTS2	Q06350	511 aa		3.19	□□□□□ -1.9
SIN4	YNL236W	GIS3	Q12418	502 aa		3.19	□□□□□ -1.9
SIN4	YNL236W	SET6	Q12529	373 aa		3.19	□□□□□ -1.9
SIN4	YNL236W	SLY1	P22213	666 aa		3.19	□□□□□ -1.9
SIN4	YNL236W	RPL5	P26321	297 aa	Known RBP	3.19	□□□□□ -1.9
SIN4	YNL236W	GLC7	P32598	312 aa	Known RBP	3.19	□□□□□ -1.9
SIN4	YNL236W	PRS1	P32895	427 aa	Known RBP	3.19	□□□□□ -1.9
SIN4	YNL236W	AZR1	P50080	613 aa		3.19	□□□□□ -1.9
SIN4	YNL236W	AFT2	Q08957	416 aa		3.19	□□□□□ -1.9
SIN4	YNL236W	SLF1	Q12034	447 aa	Known RBP	3.19	□□□□□ -1.9
SIN4	YNL236W	PNS1	Q12412	539 aa		3.19	□□□□□ -1.9
SIN4	YNL236W	RAD1	P06777	1100 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	MER1	P16523	270 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	POP5	P28005	173 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	TOA2	P32774	122 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	LOS1	P33418	1100 aa	Predicted RBP	3.18	□□□□□ -1.9
SIN4	YNL236W	TAE1	P38340	232 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	ALD5	P40047	520 aa	Known RBP	3.18	□□□□□ -1.9
SIN4	YNL236W	FMP33	P46998	180 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	PBP4	Q07362	185 aa	Known RBP	3.18	□□□□□ -1.9
SIN4	YNL236W	YPL199C	Q08954	240 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	ERP3	Q12403	225 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	ADF1	Q2V2Q1	113 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	UBA3	Q99344	299 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	ARG80	P07249	177 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	SSC1	P0CS90	654 aa	Known RBP	3.18	□□□□□ -1.9
SIN4	YNL236W	ARF2	P19146	181 aa	Known RBP	3.18	□□□□□ -1.9
SIN4	YNL236W	VPS3	P23643	1011 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	DAL2	P25335	343 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	PRR1	P28708	518 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	ARO4	P32449	370 aa	Known RBP	3.18	□□□□□ -1.9
SIN4	YNL236W	VAM7	P32912	316 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
SIN4	YNL236W	YKL071W	P36086	256 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	PEX32	P38292	413 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	CFD1	P40558	293 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	AIM24	P47127	394 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	TIM21	P53220	239 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	PXR1	P53335	271 aa	Predicted RBP	3.18	□□□□□ -1.9
SIN4	YNL236W	BET4	Q00618	327 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	YEH2	Q07950	538 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	SIA1	Q12212	622 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	MEX67	Q99257	599 aa	Known RBP	3.18	□□□□□ -1.9
SIN4	YNL236W	BNR1	P40450	1375 aa		3.18	□□□□□ -1.9
SIN4	YNL236W	TUB1	P09733	447 aa	Known RBP	3.17	□□□□□ -1.9
SIN4	YNL236W	YSR3	P23501	404 aa		3.17	□□□□□ -1.9
SIN4	YNL236W	EXG1	P23776	448 aa	Known RBP	3.17	□□□□□ -1.9
SIN4	YNL236W	SIP2	P34164	415 aa	Known RBP	3.17	□□□□□ -1.9
SIN4	YNL236W	BMH2	P34730	273 aa	Known RBP	3.17	□□□□□ -1.9
SIN4	YNL236W	YHR182W	P38870	785 aa		3.17	□□□□□ -1.9
SIN4	YNL236W	CCT4	P39078	528 aa	Known RBP	3.17	□□□□□ -1.9
SIN4	YNL236W	RBG1	P39729	369 aa		3.17	□□□□□ -1.9
SIN4	YNL236W	BIO3	P50277	480 aa		3.17	□□□□□ -1.9
SIN4	YNL236W	TAF6	P53040	516 aa		3.17	□□□□□ -1.9
SIN4	YNL236W	RRN9	P53437	365 aa		3.17	□□□□□ -1.9
SIN4	YNL236W	PIR3	Q03180	325 aa		3.17	□□□□□ -1.9
SIN4	YNL236W	ATG38	Q05789	226 aa	Known RBP	3.17	□□□□□ -1.9
SIN4	YNL236W	TPT1	Q12272	230 aa	Known RBP	3.17	□□□□□ -1.9
SIN4	YNL236W	YRM1	Q12340	786 aa		3.17	□□□□□ -1.9
SIN4	YNL236W	CAP2	P13517	287 aa		3.17	□□□□□ -1.9
SIN4	YNL236W	MBR1	P23493	339 aa		3.17	□□□□□ -1.9
SIN4	YNL236W	YCR016W	P25617	290 aa	Known RBP	3.17	□□□□□ -1.9
SIN4	YNL236W	YEF1	P32622	495 aa		3.17	□□□□□ -1.9
SIN4	YNL236W	MCR1	P36060	302 aa	Known RBP	3.17	□□□□□ -1.9
SIN4	YNL236W	CHK1	P38147	527 aa		3.17	□□□□□ -1.9
SIN4	YNL236W	YHK8	P38776	514 aa		3.17	□□□□□ -1.9
SIN4	YNL236W	RTR1	P40084	226 aa	Predicted RBP	3.17	□□□□□ -1.9
SIN4	YNL236W	SHQ1	P40486	507 aa	Predicted RBP	3.17	□□□□□ -1.9
SIN4	YNL236W	GUF1	P46943	645 aa		3.17	□□□□□ -1.9
SIN4	YNL236W	CGR1	P53188	120 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms