RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTF18	YMR078C	SUR1	P33300	382 aa		4.2	□□□□□ -1.74
CTF18	YMR078C	OXA1	P39952	402 aa		4.2	□□□□□ -1.74
CTF18	YMR078C	CLD1	P53264	445 aa		4.2	□□□□□ -1.74
CTF18	YMR078C	IST2	P38250	946 aa		4.19	□□□□□ -1.74
CTF18	YMR078C	SDT1	P53078	280 aa		4.19	□□□□□ -1.74
CTF18	YMR078C	GLE1	Q12315	538 aa		4.19	□□□□□ -1.74
CTF18	YMR078C	HTZ1	Q12692	134 aa	Known RBP	4.19	□□□□□ -1.74
CTF18	YMR078C	YER186C	P40101	306 aa		4.19	□□□□□ -1.74
CTF18	YMR078C	YET2	Q04210	160 aa		4.19	□□□□□ -1.74
CTF18	YMR078C	MGR3	Q04472	501 aa		4.19	□□□□□ -1.74
CTF18	YMR078C	SLM3	Q12093	417 aa		4.19	□□□□□ -1.74
CTF18	YMR078C	RAD1	P06777	1100 aa		4.18	□□□□□ -1.74
CTF18	YMR078C	RPS18A	P0CX55	146 aa	Known RBP	4.18	□□□□□ -1.74
CTF18	YMR078C	RPS18B	P0CX56	146 aa	Predicted RBP	4.18	□□□□□ -1.74
CTF18	YMR078C	AAT2	P23542	418 aa	Known RBP	4.18	□□□□□ -1.74
CTF18	YMR078C	LDB16	P25587	256 aa		4.18	□□□□□ -1.74
CTF18	YMR078C	PRP39	P39682	629 aa	Known RBP	4.18	□□□□□ -1.74
CTF18	YMR078C	YMR134W	P40207	237 aa		4.18	□□□□□ -1.74
CTF18	YMR078C	OSW5	P40219	148 aa		4.18	□□□□□ -1.74
CTF18	YMR078C	YCH1	P42937	148 aa		4.18	□□□□□ -1.74
CTF18	YMR078C	TIS11	P47977	285 aa		4.18	□□□□□ -1.74
CTF18	YMR078C	ALF1	P53904	254 aa		4.18	□□□□□ -1.74
CTF18	YMR078C	REX2	P54964	269 aa	Known RBP	4.18	□□□□□ -1.74
CTF18	YMR078C	SKI8	Q02793	397 aa	Predicted RBP	4.18	□□□□□ -1.74
CTF18	YMR078C	ABZ2	Q03266	374 aa		4.18	□□□□□ -1.74
CTF18	YMR078C	REV1	P12689	985 aa		4.18	□□□□□ -1.74
CTF18	YMR078C	YLR152C	P54072	576 aa		4.18	□□□□□ -1.74
CTF18	YMR078C	VPS20	Q04272	221 aa		4.18	□□□□□ -1.74
CTF18	YMR078C	APC5	Q08683	685 aa		4.18	□□□□□ -1.74
CTF18	YMR078C	STF1	P01098	86 aa		4.17	□□□□□ -1.74
CTF18	YMR078C	YNL208W	P40159	199 aa	Known RBP	4.17	□□□□□ -1.74
CTF18	YMR078C	CSM3	Q04659	317 aa		4.17	□□□□□ -1.74
CTF18	YMR078C	GAL3	P13045	520 aa		4.17	□□□□□ -1.74
CTF18	YMR078C	RPL16A	P26784	199 aa	Known RBP	4.17	□□□□□ -1.74
CTF18	YMR078C	PRR1	P28708	518 aa		4.17	□□□□□ -1.74
CTF18	YMR078C	PCH2	P38126	564 aa		4.17	□□□□□ -1.74
CTF18	YMR078C	PEX32	P38292	413 aa		4.17	□□□□□ -1.74
CTF18	YMR078C	YPT35	P38815	214 aa	Known RBP	4.17	□□□□□ -1.74
CTF18	YMR078C	YGL114W	P53134	725 aa		4.17	□□□□□ -1.74
CTF18	YMR078C	PAL1	Q05518	499 aa	Known RBP	4.17	□□□□□ -1.74
CTF18	YMR078C	HEM4	P06174	275 aa		4.16	□□□□□ -1.74
CTF18	YMR078C	CIN8	P27895	1000 aa		4.16	□□□□□ -1.74
CTF18	YMR078C	MKK1	P32490	508 aa		4.16	□□□□□ -1.74
CTF18	YMR078C	YJR030C	P47101	745 aa		4.16	□□□□□ -1.74
CTF18	YMR078C	YMR027W	Q04371	470 aa		4.16	□□□□□ -1.74
CTF18	YMR078C	RPL23A	P0CX41	137 aa	Known RBP	4.15	□□□□□ -1.74
CTF18	YMR078C	RPL23B	P0CX42	137 aa	Known RBP	4.15	□□□□□ -1.74
CTF18	YMR078C	YHR182W	P38870	785 aa		4.15	□□□□□ -1.74
CTF18	YMR078C	PGU1	P47180	361 aa		4.15	□□□□□ -1.74
CTF18	YMR078C	VAC7	P53950	1165 aa		4.15	□□□□□ -1.74
CTF18	YMR078C	TSA2	Q04120	196 aa		4.15	□□□□□ -1.74
CTF18	YMR078C	YDL109C	Q12103	647 aa		4.15	□□□□□ -1.74
CTF18	YMR078C	RTC5	Q12108	567 aa	Known RBP	4.15	□□□□□ -1.74
CTF18	YMR078C	YLL053C	P0CD98	152 aa		4.15	□□□□□ -1.75
CTF18	YMR078C	ARF2	P19146	181 aa	Known RBP	4.15	□□□□□ -1.75
CTF18	YMR078C	PMT2	P31382	759 aa		4.15	□□□□□ -1.75
CTF18	YMR078C	SDS24	P38314	527 aa		4.15	□□□□□ -1.75
CTF18	YMR078C	YDR089W	P38966	869 aa		4.15	□□□□□ -1.75
CTF18	YMR078C	PES4	P39684	611 aa		4.15	□□□□□ -1.75
CTF18	YMR078C	YNL146W	P53906	100 aa		4.15	□□□□□ -1.75
CTF18	YMR078C	YDR262W	Q12331	272 aa		4.15	□□□□□ -1.75
CTF18	YMR078C	RNR2	P09938	399 aa	Known RBP	4.14	□□□□□ -1.75
CTF18	YMR078C	CDC50	P25656	391 aa		4.14	□□□□□ -1.75
CTF18	YMR078C	OM14	P38325	134 aa		4.14	□□□□□ -1.75
CTF18	YMR078C	TIM17	P39515	158 aa		4.14	□□□□□ -1.75
CTF18	YMR078C	RBG1	P39729	369 aa		4.14	□□□□□ -1.75
CTF18	YMR078C	NAS6	P50086	228 aa		4.14	□□□□□ -1.75
CTF18	YMR078C	MSC3	Q05812	728 aa		4.14	□□□□□ -1.75
CTF18	YMR078C	YOR376W	Q08900	122 aa		4.14	□□□□□ -1.75
CTF18	YMR078C	PRB1	P09232	635 aa		4.14	□□□□□ -1.75
CTF18	YMR078C	YKR015C	P36111	568 aa		4.14	□□□□□ -1.75
CTF18	YMR078C	IML3	P38265	245 aa		4.14	□□□□□ -1.75
CTF18	YMR078C	LSM12	P38828	187 aa	Known RBP	4.14	□□□□□ -1.75
CTF18	YMR078C	PFS1	P38872	237 aa		4.14	□□□□□ -1.75
CTF18	YMR078C	AIM20	P40451	204 aa		4.14	□□□□□ -1.75
CTF18	YMR078C	VPS63	O13549	108 aa		4.13	□□□□□ -1.75
CTF18	YMR078C	RPS14A	P06367	137 aa	Known RBP	4.13	□□□□□ -1.75
CTF18	YMR078C	RCK2	P38623	610 aa		4.13	□□□□□ -1.75
CTF18	YMR078C	RPS14B	P39516	138 aa	Known RBP	4.13	□□□□□ -1.75
CTF18	YMR078C	SEH1	P53011	349 aa	Known RBP	4.13	□□□□□ -1.75
CTF18	YMR078C	LIP2	Q06005	328 aa		4.13	□□□□□ -1.75
CTF18	YMR078C	ATP16	Q12165	160 aa		4.13	□□□□□ -1.75
CTF18	YMR078C	FRE8	Q12209	686 aa		4.13	□□□□□ -1.75
CTF18	YMR078C	SFM1	Q12314	213 aa		4.13	□□□□□ -1.75
CTF18	YMR078C	SAL1	D6W196	494 aa		4.13	□□□□□ -1.75
CTF18	YMR078C	GIT1	P25346	518 aa		4.13	□□□□□ -1.75
CTF18	YMR078C	MYO3	P36006	1272 aa		4.13	□□□□□ -1.75
CTF18	YMR078C	LSG1	P53145	640 aa	Known RBP	4.13	□□□□□ -1.75
CTF18	YMR078C	PRP38	Q00723	242 aa	Predicted RBP	4.13	□□□□□ -1.75
CTF18	YMR078C	TRM82	Q03774	444 aa		4.13	□□□□□ -1.75
CTF18	YMR078C	UBA3	Q99344	299 aa		4.13	□□□□□ -1.75
CTF18	YMR078C	SSO2	P39926	295 aa		4.12	□□□□□ -1.75
CTF18	YMR078C	BTT1	P40314	149 aa	Predicted RBP	4.12	□□□□□ -1.75
CTF18	YMR078C	ALD5	P40047	520 aa	Known RBP	4.11	□□□□□ -1.75
CTF18	YMR078C	SUR7	P54003	302 aa		4.11	□□□□□ -1.75
CTF18	YMR078C	CDC37	P06101	506 aa	Known RBP	4.11	□□□□□ -1.75
CTF18	YMR078C	MIR1	P23641	311 aa	Known RBP	4.11	□□□□□ -1.75
CTF18	YMR078C	PCL1	P24867	279 aa		4.11	□□□□□ -1.75
CTF18	YMR078C	AIP1	P46680	615 aa	Known RBP	4.11	□□□□□ -1.75
CTF18	YMR078C	MDY2	Q12285	212 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 91.5 ms