RNA–Protein interactions for RNA: YLR410W

VIP1, Transcript of Inositol hexakisphosphate and inositol heptakisphosphate kinase, yeast

Gene VIP1, Length 3,441 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VIP1	YLR410W	RSC9	Q03124	581 aa		3.01	□□□□□ -1.93
VIP1	YLR410W	HER2	Q03557	464 aa		3.01	□□□□□ -1.93
VIP1	YLR410W	GPN3	Q06543	272 aa		3.01	□□□□□ -1.93
VIP1	YLR410W	PRP46	Q12417	451 aa	Predicted RBP	3.01	□□□□□ -1.93
VIP1	YLR410W	ARO4	P32449	370 aa	Known RBP	3.01	□□□□□ -1.93
VIP1	YLR410W	ECM15	P35195	104 aa		3.01	□□□□□ -1.93
VIP1	YLR410W	PEX32	P38292	413 aa		3.01	□□□□□ -1.93
VIP1	YLR410W	SMF2	P38778	549 aa		3.01	□□□□□ -1.93
VIP1	YLR410W	GEP4	P38812	185 aa		3.01	□□□□□ -1.93
VIP1	YLR410W	POP6	P53218	158 aa		3.01	□□□□□ -1.93
VIP1	YLR410W	RET3	P53600	189 aa		3.01	□□□□□ -1.93
VIP1	YLR410W	SAM50	P53969	484 aa		3.01	□□□□□ -1.93
VIP1	YLR410W	RSN1	Q03516	953 aa		3.01	□□□□□ -1.93
VIP1	YLR410W	CCE1	Q03702	353 aa		3.01	□□□□□ -1.93
VIP1	YLR410W	URH1	Q04179	340 aa		3.01	□□□□□ -1.93
VIP1	YLR410W	GAT3	Q07928	141 aa		3.01	□□□□□ -1.93
VIP1	YLR410W	RUP1	Q12242	671 aa		3.01	□□□□□ -1.93
VIP1	YLR410W	YCR016W	P25617	290 aa	Known RBP	3	□□□□□ -1.93
VIP1	YLR410W	ITR1	P30605	584 aa		3	□□□□□ -1.93
VIP1	YLR410W	SEC9	P40357	651 aa		3	□□□□□ -1.93
VIP1	YLR410W	AZR1	P50080	613 aa		3	□□□□□ -1.93
VIP1	YLR410W	YGL082W	P53155	381 aa		3	□□□□□ -1.93
VIP1	YLR410W	SLI1	P53304	468 aa		3	□□□□□ -1.93
VIP1	YLR410W	PNG1	Q02890	363 aa		3	□□□□□ -1.93
VIP1	YLR410W	DIG1	Q03063	452 aa	Known RBP	3	□□□□□ -1.93
VIP1	YLR410W	APC4	Q04601	652 aa		3	□□□□□ -1.93
VIP1	YLR410W	BCP1	Q06338	283 aa		3	□□□□□ -1.93
VIP1	YLR410W	CMS1	Q07897	291 aa	Known RBP	3	□□□□□ -1.93
VIP1	YLR410W	UBA3	Q99344	299 aa		3	□□□□□ -1.93
VIP1	YLR410W	POM152	P39685	1337 aa		3	□□□□□ -1.93
VIP1	YLR410W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
VIP1	YLR410W	SSC1	P0CS90	654 aa	Known RBP	3	□□□□□ -1.93
VIP1	YLR410W	PRP16	P15938	1071 aa	Predicted RBP	3	□□□□□ -1.93
VIP1	YLR410W	LSB5	P25369	354 aa		3	□□□□□ -1.93
VIP1	YLR410W	RME1	P32338	300 aa	Known RBP	3	□□□□□ -1.93
VIP1	YLR410W	ECM8	P38246	354 aa		3	□□□□□ -1.93
VIP1	YLR410W	BIO3	P50277	480 aa		3	□□□□□ -1.93
VIP1	YLR410W	SPP2	Q02521	185 aa		3	□□□□□ -1.93
VIP1	YLR410W	YMR034C	Q05131	434 aa	Predicted RBP	3	□□□□□ -1.93
VIP1	YLR410W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
VIP1	YLR410W	RPL24A	P04449	155 aa	Known RBP	3	□□□□□ -1.93
VIP1	YLR410W	CWP1	P28319	239 aa		3	□□□□□ -1.93
VIP1	YLR410W	BMH2	P34730	273 aa	Known RBP	3	□□□□□ -1.93
VIP1	YLR410W	BTT1	P40314	149 aa	Predicted RBP	3	□□□□□ -1.93
VIP1	YLR410W	GWT1	P47026	490 aa		3	□□□□□ -1.93
VIP1	YLR410W	YDL186W	P48568	277 aa		3	□□□□□ -1.93
VIP1	YLR410W	PIR3	Q03180	325 aa		3	□□□□□ -1.93
VIP1	YLR410W	MDM36	Q06820	579 aa		3	□□□□□ -1.93
VIP1	YLR410W	IRC10	Q08118	586 aa		3	□□□□□ -1.93
VIP1	YLR410W	OSW1	Q08692	278 aa		3	□□□□□ -1.93
VIP1	YLR410W	PNS1	Q12412	539 aa		3	□□□□□ -1.93
VIP1	YLR410W	GLT1	Q12680	2145 aa	Known RBP	3	□□□□□ -1.93
VIP1	YLR410W	RNA1	P11745	407 aa	Known RBP	2.99	□□□□□ -1.93
VIP1	YLR410W	SPS100	P13130	326 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	VPS1	P21576	704 aa	Known RBP	2.99	□□□□□ -1.93
VIP1	YLR410W	MNS1	P32906	549 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	MRPS5	P33759	307 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	OAR1	P35731	278 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	SHQ1	P40486	507 aa	Predicted RBP	2.99	□□□□□ -1.93
VIP1	YLR410W	UTP25	P40498	721 aa	Known RBP	2.99	□□□□□ -1.93
VIP1	YLR410W	GOR1	P53839	350 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	SHS1	Q07657	551 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	THI20	Q08224	551 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	MUM3	Q08750	479 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	SRL2	Q12020	392 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	DRS2	P39524	1355 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	YRF1-2	P40105	1681 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	ARG4	P04076	463 aa	Predicted RBP	2.99	□□□□□ -1.93
VIP1	YLR410W	EXO70	P19658	623 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	YCR007C	P25354	239 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	YCR022C	P25620	114 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	SKG6	P32900	734 aa	Predicted RBP	2.99	□□□□□ -1.93
VIP1	YLR410W	LEU5	P38702	357 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	YHK8	P38776	514 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	RTR1	P40084	226 aa	Predicted RBP	2.99	□□□□□ -1.93
VIP1	YLR410W	SEG1	Q04279	960 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	SNX3	Q08826	162 aa	Known RBP	2.99	□□□□□ -1.93
VIP1	YLR410W	SIR4	P11978	1358 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	RAD1	P06777	1100 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	EXG1	P23776	448 aa	Known RBP	2.99	□□□□□ -1.93
VIP1	YLR410W	RVS161	P25343	265 aa	Known RBP	2.99	□□□□□ -1.93
VIP1	YLR410W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	RIP-Chip
VIP1	YLR410W	YHR122W	P38829	231 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	YIR016W	P40572	265 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	FMP33	P46998	180 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	PXR1	P53335	271 aa	Predicted RBP	2.99	□□□□□ -1.93
VIP1	YLR410W	MED4	Q12343	284 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	ADF1	Q2V2Q1	113 aa		2.99	□□□□□ -1.93
VIP1	YLR410W	DET1	Q99288	334 aa	Known RBP	2.99	□□□□□ -1.93
VIP1	YLR410W	PSK1	P31374	1356 aa		2.98	□□□□□ -1.93
VIP1	YLR410W	CAP2	P13517	287 aa		2.98	□□□□□ -1.93
VIP1	YLR410W	PET123	P17558	318 aa		2.98	□□□□□ -1.93
VIP1	YLR410W	GIM3	P53900	129 aa		2.98	□□□□□ -1.93
VIP1	YLR410W	CAC2	Q04199	468 aa		2.98	□□□□□ -1.93
VIP1	YLR410W	MYO5	Q04439	1219 aa	Known RBP	2.98	□□□□□ -1.93
VIP1	YLR410W	POM33	Q12164	279 aa		2.98	□□□□□ -1.93
VIP1	YLR410W	CRC1	Q12289	327 aa		2.98	□□□□□ -1.93
VIP1	YLR410W	YOP1	Q12402	180 aa		2.98	□□□□□ -1.93
VIP1	YLR410W	MATALPHA1	P0CY06	175 aa		2.98	□□□□□ -1.93
VIP1	YLR410W	HMLALPHA1	P0CY07	175 aa		2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms