RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W TOA1P32773 286 aa2.59□□□□□ -2
VPS38YLR360W COS9P36034 407 aa2.59□□□□□ -2
VPS38YLR360W YBL028CP38202 106 aa2.59□□□□□ -2
VPS38YLR360W SEC28P40509 296 aaKnown RBP2.59□□□□□ -2
VPS38YLR360W GAS2Q06135 555 aa2.59□□□□□ -2
VPS38YLR360W YOR376WQ08900 122 aa2.59□□□□□ -2
VPS38YLR360W SRO7Q12038 1033 aa2.59□□□□□ -2
VPS38YLR360W ATP16Q12165 160 aa2.59□□□□□ -2
VPS38YLR360W RPL6BP05739 176 aaKnown RBP2.58□□□□□ -2
VPS38YLR360W RPL23AP0CX41 137 aaKnown RBP2.58□□□□□ -2
VPS38YLR360W RPL23BP0CX42 137 aaKnown RBP2.58□□□□□ -2
VPS38YLR360W LYS12P40495 371 aaKnown RBP2.58□□□□□ -2
VPS38YLR360W SNL1P40548 159 aa2.58□□□□□ -2
VPS38YLR360W BIO3P50277 480 aa2.58□□□□□ -2
VPS38YLR360W RNH201P53942 307 aa2.58□□□□□ -2
VPS38YLR360W RPL6AQ02326 176 aaKnown RBP2.58□□□□□ -2
VPS38YLR360W PEX27Q08580 376 aa2.58□□□□□ -2
VPS38YLR360W LDB17Q12342 491 aa2.58□□□□□ -2
VPS38YLR360W RAX2Q12465 1220 aa2.58□□□□□ -2
VPS38YLR360W TPI1P00942 248 aaKnown RBP2.57□□□□□ -2
VPS38YLR360W RPS19AP07280 144 aaKnown RBP2.57□□□□□ -2
VPS38YLR360W RPS19BP07281 144 aaPredicted RBP2.57□□□□□ -2
VPS38YLR360W UNG1P12887 359 aa2.57□□□□□ -2
VPS38YLR360W MSK1P32048 576 aa2.57□□□□□ -2
VPS38YLR360W SMP1P38128 452 aa2.57□□□□□ -2
VPS38YLR360W CHL4P38907 458 aa2.57□□□□□ -2
VPS38YLR360W CDH1P53197 566 aa2.57□□□□□ -2
VPS38YLR360W PIN3Q06449 215 aa2.57□□□□□ -2
VPS38YLR360W YFH1Q07540 174 aa2.57□□□□□ -2
VPS38YLR360W TIR4Q12218 487 aaPredicted RBP2.57□□□□□ -2
VPS38YLR360W RPS14AP06367 137 aaKnown RBP2.56□□□□□ -2
VPS38YLR360W EPT1P22140 391 aa2.56□□□□□ -2
VPS38YLR360W DBR1P24309 405 aaKnown RBP2.56□□□□□ -2
VPS38YLR360W PSO2P30620 661 aa2.56□□□□□ -2
VPS38YLR360W ECM34P38728 170 aa2.56□□□□□ -2
VPS38YLR360W YHR182WP38870 785 aa2.56□□□□□ -2
VPS38YLR360W RPS14BP39516 138 aaKnown RBP2.56□□□□□ -2
VPS38YLR360W JEM1P40358 645 aa2.56□□□□□ -2
VPS38YLR360W STB1P42845 420 aa2.56□□□□□ -2
VPS38YLR360W AIM23P47015 356 aa2.56□□□□□ -2
VPS38YLR360W YJR030CP47101 745 aa2.56□□□□□ -2
VPS38YLR360W SLT2Q00772 484 aa2.56□□□□□ -2
VPS38YLR360W MRX11Q03079 207 aa2.56□□□□□ -2
VPS38YLR360W YOL075CQ08234 1294 aa2.56□□□□□ -2
VPS38YLR360W HIF1Q12373 385 aa2.56□□□□□ -2
VPS38YLR360W DET1Q99288 334 aaKnown RBP2.56□□□□□ -2
VPS38YLR360W SCH9P11792 824 aaKnown RBP2.55□□□□□ -2
VPS38YLR360W MIR1P23641 311 aaKnown RBP2.55□□□□□ -2
VPS38YLR360W PMT2P31382 759 aa2.55□□□□□ -2
VPS38YLR360W EFB1P32471 206 aaKnown RBP2.55□□□□□ -2
VPS38YLR360W FMT1P32785 401 aa2.55□□□□□ -2
VPS38YLR360W DTR1P38125 572 aa2.55□□□□□ -2
VPS38YLR360W YGR015CP53208 328 aa2.55□□□□□ -2
VPS38YLR360W RET3P53600 189 aa2.55□□□□□ -2
VPS38YLR360W RMI1Q02685 241 aa2.55□□□□□ -2
VPS38YLR360W AIM33Q04516 312 aa2.55□□□□□ -2
VPS38YLR360W MSP1P28737 362 aa2.54□□□□□ -2
VPS38YLR360W YKR015CP36111 568 aa2.54□□□□□ -2
VPS38YLR360W YJR054WP47114 497 aa2.54□□□□□ -2
VPS38YLR360W MPS2P53159 387 aa2.54□□□□□ -2
VPS38YLR360W HST1P53685 503 aa2.54□□□□□ -2
VPS38YLR360W PRM7Q12459 698 aa2.54□□□□□ -2
VPS38YLR360W FSH3Q99369 266 aa2.54□□□□□ -2
VPS38YLR360W VAM7P32912 316 aa2.53□□□□□ -2
VPS38YLR360W YSW1P38280 609 aa2.53□□□□□ -2
VPS38YLR360W YPT35P38815 214 aaKnown RBP2.53□□□□□ -2
VPS38YLR360W RRT13P40042 185 aa2.53□□□□□ -2
VPS38YLR360W YGR067CP53243 804 aa2.53□□□□□ -2
VPS38YLR360W TFB5Q3E7C1 72 aaPredicted RBP2.53□□□□□ -2
VPS38YLR360W SPS19P32573 292 aaKnown RBP2.52□□□□□ -2.01
VPS38YLR360W SHE1P38200 338 aa2.52□□□□□ -2.01
VPS38YLR360W RXT2P38255 430 aa2.52□□□□□ -2.01
VPS38YLR360W GDT1P38301 280 aaPredicted RBP2.52□□□□□ -2.01
VPS38YLR360W FHL1P39521 936 aa2.52□□□□□ -2.01
VPS38YLR360W PFS2P42841 465 aaKnown RBP2.52□□□□□ -2.01
VPS38YLR360W COQ5P49017 307 aa2.52□□□□□ -2.01
VPS38YLR360W YPR078CQ06813 372 aa2.52□□□□□ -2.01
VPS38YLR360W GLE1Q12315 538 aa2.52□□□□□ -2.01
VPS38YLR360W UBA3Q99344 299 aa2.52□□□□□ -2.01
VPS38YLR360W FAA1P30624 700 aaKnown RBP2.51□□□□□ -2.01
VPS38YLR360W ZIP1P31111 875 aa2.51□□□□□ -2.01
VPS38YLR360W PUP2P32379 260 aa2.51□□□□□ -2.01
VPS38YLR360W RBG1P39729 369 aa2.51□□□□□ -2.01
VPS38YLR360W LST7P53237 242 aa2.51□□□□□ -2.01
VPS38YLR360W SMP3Q04174 516 aa2.51□□□□□ -2.01
VPS38YLR360W DDC1Q08949 612 aa2.51□□□□□ -2.01
VPS38YLR360W STE2D6VTK4 431 aa2.5□□□□□ -2.01
VPS38YLR360W DAP2P18962 818 aa2.5□□□□□ -2.01
VPS38YLR360W UBA1P22515 1024 aaKnown RBP2.5□□□□□ -2.01
VPS38YLR360W PTK1P36002 662 aaPredicted RBP2.5□□□□□ -2.01
VPS38YLR360W SHE3P38272 425 aaKnown RBP2.5□□□□□ -2.01
VPS38YLR360W LCP5P40079 357 aaPredicted RBP2.5□□□□□ -2.01
VPS38YLR360W MOB2P43563 287 aa2.5□□□□□ -2.01
VPS38YLR360W YNR068CP53754 272 aa2.5□□□□□ -2.01
VPS38YLR360W EOS1P53938 366 aa2.5□□□□□ -2.01
VPS38YLR360W TRM82Q03774 444 aa2.5□□□□□ -2.01
VPS38YLR360W FRE8Q12209 686 aa2.5□□□□□ -2.01
VPS38YLR360W FRE6Q12473 712 aa2.5□□□□□ -2.01
VPS38YLR360W YOL085CQ99345 113 aa2.5□□□□□ -2.01
VPS38YLR360W RPS16AP0CX51 143 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms