RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W YDR541CQ03049 344 aa3.37□□□□□ -1.87
LCB5YLR260W IPK1Q06667 281 aa3.37□□□□□ -1.87
LCB5YLR260W MRPL35Q06678 367 aa3.37□□□□□ -1.87
LCB5YLR260W RPS10AQ08745 105 aaPredicted RBP3.37□□□□□ -1.87
LCB5YLR260W CYC1P00044 109 aaPredicted RBP3.36□□□□□ -1.87
LCB5YLR260W PUT2P07275 575 aa3.36□□□□□ -1.87
LCB5YLR260W NHP6BP11633 99 aaKnown RBP3.36□□□□□ -1.87
LCB5YLR260W ART10P18634 518 aaKnown RBP3.36□□□□□ -1.87
LCB5YLR260W AAT2P23542 418 aaKnown RBP3.36□□□□□ -1.87
LCB5YLR260W ADE1P27616 306 aa3.36□□□□□ -1.87
LCB5YLR260W ATP7P30902 174 aa3.36□□□□□ -1.87
LCB5YLR260W LHS1P36016 881 aa3.36□□□□□ -1.87
LCB5YLR260W ARA1P38115 344 aa3.36□□□□□ -1.87
LCB5YLR260W SPP381P38282 291 aaPredicted RBP3.36□□□□□ -1.87
LCB5YLR260W PCA1P38360 1216 aa3.36□□□□□ -1.87
LCB5YLR260W HIS2P38635 335 aa3.36□□□□□ -1.87
LCB5YLR260W IMD2P38697 523 aaKnown RBP3.36□□□□□ -1.87
LCB5YLR260W YEL020CP39994 560 aa3.36□□□□□ -1.87
LCB5YLR260W SSN8P47821 323 aa3.36□□□□□ -1.87
LCB5YLR260W IST1P53843 298 aaPredicted RBP3.36□□□□□ -1.87
LCB5YLR260W YLR040CQ07988 224 aa3.36□□□□□ -1.87
LCB5YLR260W RAX1Q08760 435 aa3.36□□□□□ -1.87
LCB5YLR260W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
LCB5YLR260W GRE1Q08969 168 aa3.36□□□□□ -1.87
LCB5YLR260W YDL109CQ12103 647 aa3.36□□□□□ -1.87
LCB5YLR260W INP53Q12271 1107 aa3.36□□□□□ -1.87
LCB5YLR260W SPO24Q3E752 67 aa3.36□□□□□ -1.87
LCB5YLR260W POL2P21951 2222 aaKnown RBP3.36□□□□□ -1.87
LCB5YLR260W RAD7P06779 565 aa3.35□□□□□ -1.87
LCB5YLR260W RHO1P06780 209 aaKnown RBP3.35□□□□□ -1.87
LCB5YLR260W RPL35AP0CX84 120 aaKnown RBP3.35□□□□□ -1.87
LCB5YLR260W RPL35BP0CX85 120 aaKnown RBP3.35□□□□□ -1.87
LCB5YLR260W YSP3P25036 478 aa3.35□□□□□ -1.87
LCB5YLR260W PTC6P25646 442 aa3.35□□□□□ -1.87
LCB5YLR260W PEX3P28795 441 aa3.35□□□□□ -1.87
LCB5YLR260W GSH1P32477 678 aa3.35□□□□□ -1.87
LCB5YLR260W DOA1P36037 715 aa3.35□□□□□ -1.87
LCB5YLR260W SBE22P38814 852 aa3.35□□□□□ -1.87
LCB5YLR260W GPI16P38875 610 aa3.35□□□□□ -1.87
LCB5YLR260W AIM18P38884 321 aa3.35□□□□□ -1.87
LCB5YLR260W PLB1P39105 664 aa3.35□□□□□ -1.87
LCB5YLR260W YAR1P46683 200 aa3.35□□□□□ -1.87
LCB5YLR260W MSE1P48525 536 aa3.35□□□□□ -1.87
LCB5YLR260W COQ5P49017 307 aa3.35□□□□□ -1.87
LCB5YLR260W NBP35P52920 328 aa3.35□□□□□ -1.87
LCB5YLR260W COG7P53195 279 aa3.35□□□□□ -1.87
LCB5YLR260W YGR079WP53249 370 aa3.35□□□□□ -1.87
LCB5YLR260W SLX9P53251 210 aaPredicted RBP3.35□□□□□ -1.87
LCB5YLR260W SLI1P53304 468 aa3.35□□□□□ -1.87
LCB5YLR260W YNL181WP53878 407 aa3.35□□□□□ -1.87
LCB5YLR260W SPC2Q04969 178 aa3.35□□□□□ -1.87
LCB5YLR260W GRX8Q05926 109 aa3.35□□□□□ -1.87
LCB5YLR260W THI7Q05998 598 aa3.35□□□□□ -1.87
LCB5YLR260W VPS74Q06385 345 aa3.35□□□□□ -1.87
LCB5YLR260W PAM18Q07914 168 aa3.35□□□□□ -1.87
LCB5YLR260W TEL1P38110 2787 aa3.35□□□□□ -1.87
LCB5YLR260W COX2P00410 251 aa3.35□□□□□ -1.87
LCB5YLR260W COX3P00420 269 aa3.35□□□□□ -1.87
LCB5YLR260W RPL31BP0C2H9 113 aaKnown RBP3.35□□□□□ -1.87
LCB5YLR260W PRP4P20053 465 aaKnown RBP3.35□□□□□ -1.87
LCB5YLR260W CMK2P22517 447 aa3.35□□□□□ -1.87
LCB5YLR260W VPS34P22543 875 aa3.35□□□□□ -1.87
LCB5YLR260W ELO2P25358 347 aa3.35□□□□□ -1.87
LCB5YLR260W IMG1P25626 169 aa3.35□□□□□ -1.87
LCB5YLR260W RPS5P26783 225 aaKnown RBP3.35□□□□□ -1.87
LCB5YLR260W YHR210CP38893 341 aa3.35□□□□□ -1.87
LCB5YLR260W TIM17P39515 158 aa3.35□□□□□ -1.87
LCB5YLR260W PRP39P39682 629 aaKnown RBP3.35□□□□□ -1.87
LCB5YLR260W ECM1P39715 212 aa3.35□□□□□ -1.87
LCB5YLR260W SEC72P39742 193 aaKnown RBP3.35□□□□□ -1.87
LCB5YLR260W GET2P40056 285 aa3.35□□□□□ -1.87
LCB5YLR260W HXT9P40885 567 aa3.35□□□□□ -1.87
LCB5YLR260W APS3P47064 194 aa3.35□□□□□ -1.87
LCB5YLR260W SUN4P53616 420 aa3.35□□□□□ -1.87
LCB5YLR260W HXT11P54862 567 aa3.35□□□□□ -1.87
LCB5YLR260W MRP51Q02950 344 aa3.35□□□□□ -1.87
LCB5YLR260W TAF12Q03761 539 aa3.35□□□□□ -1.87
LCB5YLR260W YMR310CQ04867 317 aaPredicted RBP3.35□□□□□ -1.87
LCB5YLR260W ATG10Q07879 167 aa3.35□□□□□ -1.87
LCB5YLR260W FRE5Q08908 694 aa3.35□□□□□ -1.87
LCB5YLR260W DAS2Q12084 232 aa3.35□□□□□ -1.87
LCB5YLR260W AAC1P04710 309 aa3.34□□□□□ -1.87
LCB5YLR260W RBK1P25332 333 aa3.34□□□□□ -1.87
LCB5YLR260W CSE1P33307 960 aa3.34□□□□□ -1.87
LCB5YLR260W RPF2P36160 344 aaKnown RBP3.34□□□□□ -1.87
LCB5YLR260W LDB7P38210 180 aa3.34□□□□□ -1.87
LCB5YLR260W POP7P38291 140 aa3.34□□□□□ -1.87
LCB5YLR260W YBP1P38315 674 aa3.34□□□□□ -1.87
LCB5YLR260W LCP5P40079 357 aaPredicted RBP3.34□□□□□ -1.87
LCB5YLR260W TES1P41903 349 aaKnown RBP3.34□□□□□ -1.87
LCB5YLR260W CIS3P47001 227 aa3.34□□□□□ -1.87
LCB5YLR260W TAX4P47030 604 aa3.34□□□□□ -1.87
LCB5YLR260W STE24P47154 453 aa3.34□□□□□ -1.87
LCB5YLR260W IBA57P47158 497 aa3.34□□□□□ -1.87
LCB5YLR260W KAP114P53067 1004 aa3.34□□□□□ -1.87
LCB5YLR260W ASI2P53895 289 aa3.34□□□□□ -1.87
LCB5YLR260W SPP2Q02521 185 aa3.34□□□□□ -1.87
LCB5YLR260W SHR3Q02774 210 aa3.34□□□□□ -1.87
LCB5YLR260W YMR226CQ05016 267 aaKnown RBP3.34□□□□□ -1.87
LCB5YLR260W ATG17Q06410 417 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms