RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	DET1	Q99288	334 aa	Known RBP	4.73	□□□□□ -1.65
RSA3	YLR221C	VPS63	O13549	108 aa		4.72	□□□□□ -1.65
RSA3	YLR221C	DAL80	P26343	269 aa		4.72	□□□□□ -1.65
RSA3	YLR221C	CIN8	P27895	1000 aa		4.72	□□□□□ -1.65
RSA3	YLR221C	YKR015C	P36111	568 aa		4.72	□□□□□ -1.65
RSA3	YLR221C	END3	P39013	349 aa		4.72	□□□□□ -1.65
RSA3	YLR221C	YFR018C	P43599	363 aa		4.72	□□□□□ -1.65
RSA3	YLR221C	YJR030C	P47101	745 aa		4.72	□□□□□ -1.65
RSA3	YLR221C	BIR1	P47134	954 aa		4.72	□□□□□ -1.65
RSA3	YLR221C	REX2	P54964	269 aa	Known RBP	4.72	□□□□□ -1.65
RSA3	YLR221C	ABZ2	Q03266	374 aa		4.72	□□□□□ -1.65
RSA3	YLR221C	STE23	Q06010	1027 aa		4.72	□□□□□ -1.65
RSA3	YLR221C	IST2	P38250	946 aa		4.71	□□□□□ -1.66
RSA3	YLR221C	YPT35	P38815	214 aa	Known RBP	4.71	□□□□□ -1.66
RSA3	YLR221C	ATG7	P38862	630 aa		4.71	□□□□□ -1.66
RSA3	YLR221C	MNN9	P39107	395 aa	Known RBP	4.71	□□□□□ -1.66
RSA3	YLR221C	YNL208W	P40159	199 aa	Known RBP	4.71	□□□□□ -1.66
RSA3	YLR221C	BTT1	P40314	149 aa	Predicted RBP	4.71	□□□□□ -1.66
RSA3	YLR221C	AIM20	P40451	204 aa		4.71	□□□□□ -1.66
RSA3	YLR221C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	RIP-Chip
RSA3	YLR221C	PLP2	Q12017	286 aa		4.71	□□□□□ -1.66
RSA3	YLR221C	HIF1	Q12373	385 aa		4.71	□□□□□ -1.66
RSA3	YLR221C	YDL199C	Q12407	687 aa		4.71	□□□□□ -1.66
RSA3	YLR221C	RPS18A	P0CX55	146 aa	Known RBP	4.7	□□□□□ -1.66
RSA3	YLR221C	RPS18B	P0CX56	146 aa	Predicted RBP	4.7	□□□□□ -1.66
RSA3	YLR221C	MYO3	P36006	1272 aa		4.7	□□□□□ -1.66
RSA3	YLR221C	LSM12	P38828	187 aa	Known RBP	4.7	□□□□□ -1.66
RSA3	YLR221C	CAB5	Q03941	241 aa		4.7	□□□□□ -1.66
RSA3	YLR221C	MSC3	Q05812	728 aa		4.7	□□□□□ -1.66
RSA3	YLR221C	RRG7	Q08774	242 aa	Predicted RBP	4.7	□□□□□ -1.66
RSA3	YLR221C	UBA3	Q99344	299 aa		4.7	□□□□□ -1.66
RSA3	YLR221C	HEM4	P06174	275 aa		4.69	□□□□□ -1.66
RSA3	YLR221C	UTR1	P21373	530 aa		4.69	□□□□□ -1.66
RSA3	YLR221C	ANR2	P36090	516 aa	Predicted RBP	4.69	□□□□□ -1.66
RSA3	YLR221C	SWC5	P38326	303 aa		4.69	□□□□□ -1.66
RSA3	YLR221C	PTI1	P39927	425 aa	Predicted RBP	4.69	□□□□□ -1.66
RSA3	YLR221C	EGT2	P42835	1041 aa		4.69	□□□□□ -1.66
RSA3	YLR221C	SHY1	P53266	389 aa		4.69	□□□□□ -1.66
RSA3	YLR221C	YDL109C	Q12103	647 aa		4.69	□□□□□ -1.66
RSA3	YLR221C	YIL002W-A	Q3E7Z5	69 aa		4.69	□□□□□ -1.66
RSA3	YLR221C	RAD1	P06777	1100 aa		4.68	□□□□□ -1.66
RSA3	YLR221C	RVS161	P25343	265 aa	Known RBP	4.68	□□□□□ -1.66
RSA3	YLR221C	ERG9	P29704	444 aa		4.68	□□□□□ -1.66
RSA3	YLR221C	VMA5	P31412	392 aa	Known RBP	4.68	□□□□□ -1.66
RSA3	YLR221C	MRPL40	P36534	297 aa		4.68	□□□□□ -1.66
RSA3	YLR221C	AIM10	P39965	576 aa	Known RBP	4.68	□□□□□ -1.66
RSA3	YLR221C	ATG18	P43601	500 aa		4.68	□□□□□ -1.66
RSA3	YLR221C	CIN2	P46670	268 aa		4.68	□□□□□ -1.66
RSA3	YLR221C	CTK3	P46963	296 aa	Predicted RBP	4.68	□□□□□ -1.66
RSA3	YLR221C	BNS1	P50084	137 aa		4.68	□□□□□ -1.66
RSA3	YLR221C	CRH1	P53301	507 aa		4.68	□□□□□ -1.66
RSA3	YLR221C	CSM3	Q04659	317 aa		4.68	□□□□□ -1.66
RSA3	YLR221C	BUR2	Q05949	395 aa		4.68	□□□□□ -1.66
RSA3	YLR221C	MFG1	Q07684	458 aa		4.68	□□□□□ -1.66
RSA3	YLR221C	NAG1	Q8TGN9	163 aa		4.68	□□□□□ -1.66
RSA3	YLR221C	ADH2	P00331	348 aa	Known RBP	4.67	□□□□□ -1.66
RSA3	YLR221C	AAT2	P23542	418 aa	Known RBP	4.67	□□□□□ -1.66
RSA3	YLR221C	YPS1	P32329	569 aa		4.67	□□□□□ -1.66
RSA3	YLR221C	MKK1	P32490	508 aa		4.67	□□□□□ -1.66
RSA3	YLR221C	EBP2	P36049	427 aa	Known RBP	4.67	□□□□□ -1.66
RSA3	YLR221C	MRPL10	P36520	322 aa		4.67	□□□□□ -1.66
RSA3	YLR221C	LOC1	P43586	204 aa	Predicted RBP	4.67	□□□□□ -1.66
RSA3	YLR221C	NAS6	P50086	228 aa		4.67	□□□□□ -1.66
RSA3	YLR221C	ERV25	P54837	211 aa	Known RBP	4.67	□□□□□ -1.66
RSA3	YLR221C	RVB1	Q03940	463 aa	Known RBP	4.67	□□□□□ -1.66
RSA3	YLR221C	CUR1	Q06469	252 aa		4.67	□□□□□ -1.66
RSA3	YLR221C	HRT3	Q12347	344 aa		4.67	□□□□□ -1.66
RSA3	YLR221C	PFK27	Q12471	397 aa	Predicted RBP	4.67	□□□□□ -1.66
RSA3	YLR221C	RPC40	P07703	335 aa	Known RBP	4.66	□□□□□ -1.66
RSA3	YLR221C	RPL23A	P0CX41	137 aa	Known RBP	4.66	□□□□□ -1.66
RSA3	YLR221C	RPL23B	P0CX42	137 aa	Known RBP	4.66	□□□□□ -1.66
RSA3	YLR221C	RPL18A	P0CX49	186 aa	Known RBP	4.66	□□□□□ -1.66
RSA3	YLR221C	RPL18B	P0CX50	186 aa	Known RBP	4.66	□□□□□ -1.66
RSA3	YLR221C	ISY1	P21374	235 aa	Predicted RBP	4.66	□□□□□ -1.66
RSA3	YLR221C	CHA1	P25379	360 aa	Known RBP	4.66	□□□□□ -1.66
RSA3	YLR221C	DCC1	P25559	380 aa		4.66	□□□□□ -1.66
RSA3	YLR221C	IML3	P38265	245 aa		4.66	□□□□□ -1.66
RSA3	YLR221C	UTP25	P40498	721 aa	Known RBP	4.66	□□□□□ -1.66
RSA3	YLR221C	TAF6	P53040	516 aa		4.66	□□□□□ -1.66
RSA3	YLR221C	DNL4	Q08387	944 aa	Predicted RBP	4.66	□□□□□ -1.66
RSA3	YLR221C	RSA1	Q08932	381 aa		4.66	□□□□□ -1.66
RSA3	YLR221C	MSS116	P15424	664 aa	Known RBP	4.65	□□□□□ -1.67
RSA3	YLR221C	DBP3	P20447	523 aa	Known RBP	4.65	□□□□□ -1.67
RSA3	YLR221C	SAR1	P20606	190 aa	Known RBP	4.65	□□□□□ -1.67
RSA3	YLR221C	RBK1	P25332	333 aa		4.65	□□□□□ -1.67
RSA3	YLR221C	ACB1	P31787	87 aa		4.65	□□□□□ -1.67
RSA3	YLR221C	SWD3	P38123	315 aa		4.65	□□□□□ -1.67
RSA3	YLR221C	OXA1	P39952	402 aa		4.65	□□□□□ -1.67
RSA3	YLR221C	YER186C	P40101	306 aa		4.65	□□□□□ -1.67
RSA3	YLR221C	YNL320W	P42840	284 aa		4.65	□□□□□ -1.67
RSA3	YLR221C	VOA1	P53262	265 aa		4.65	□□□□□ -1.67
RSA3	YLR221C	YGR168C	P53293	376 aa		4.65	□□□□□ -1.67
RSA3	YLR221C	SKI8	Q02793	397 aa	Predicted RBP	4.65	□□□□□ -1.67
RSA3	YLR221C	SCW10	Q04951	389 aa		4.65	□□□□□ -1.67
RSA3	YLR221C	WTM1	Q12363	437 aa	Known RBP	4.65	□□□□□ -1.67
RSA3	YLR221C	GIT1	P25346	518 aa		4.64	□□□□□ -1.67
RSA3	YLR221C	LDS1	P31379	325 aa		4.64	□□□□□ -1.67
RSA3	YLR221C	MEP1	P40260	492 aa		4.64	□□□□□ -1.67
RSA3	YLR221C	UTP18	P40362	594 aa	Predicted RBP	4.64	□□□□□ -1.67
RSA3	YLR221C	DFG10	P40526	253 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms