RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	MNN9	P39107	395 aa	Known RBP	5.98	□□□□□ -1.45
TIF1	YKR059W	TIM17	P39515	158 aa		5.98	□□□□□ -1.45
TIF1	YKR059W	CFD1	P40558	293 aa		5.98	□□□□□ -1.45
TIF1	YKR059W	SPG5	P42933	373 aa		5.98	□□□□□ -1.45
TIF1	YKR059W	YHC3	P47040	408 aa		5.98	□□□□□ -1.45
TIF1	YKR059W	ZRG17	P53735	605 aa		5.98	□□□□□ -1.45
TIF1	YKR059W	RLI1	Q03195	608 aa	Known RBP	5.98	□□□□□ -1.45
TIF1	YKR059W	ABZ2	Q03266	374 aa		5.98	□□□□□ -1.45
TIF1	YKR059W	POS5	Q06892	414 aa		5.98	□□□□□ -1.45
TIF1	YKR059W	MCH4	Q08268	501 aa		5.98	□□□□□ -1.45
TIF1	YKR059W	RKM1	Q08961	583 aa	Predicted RBP	5.98	□□□□□ -1.45
TIF1	YKR059W	DAS2	Q12084	232 aa		5.98	□□□□□ -1.45
TIF1	YKR059W	YLL056C	Q12177	298 aa		5.98	□□□□□ -1.45
TIF1	YKR059W	SCEI	P03882	235 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	RPL43A	P0CX25	92 aa	Known RBP	5.97	□□□□□ -1.45
TIF1	YKR059W	RPL43B	P0CX26	92 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	ATP10	P18496	279 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	RPB8	P20436	146 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	DCC1	P25559	380 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	SIN4	P32259	974 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	HIS2	P38635	335 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	YAT2	P40017	923 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	BRO1	P48582	844 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	UBP8	P50102	471 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	ROG1	P53118	685 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	SMM1	P53720	384 aa	Known RBP	5.97	□□□□□ -1.45
TIF1	YKR059W	TLG1	Q03322	224 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	SMA2	Q04658	369 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	RNH1	Q04740	348 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	MSC3	Q05812	728 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	PDR8	Q06149	701 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	GSH2	Q08220	491 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	GTT2	Q12390	233 aa		5.97	□□□□□ -1.45
TIF1	YKR059W	PEP5	P12868	1029 aa		5.96	□□□□□ -1.46
TIF1	YKR059W	TYR1	P20049	452 aa		5.96	□□□□□ -1.46
TIF1	YKR059W	SLY1	P22213	666 aa		5.96	□□□□□ -1.46
TIF1	YKR059W	TCM62	P38228	572 aa	Known RBP	5.96	□□□□□ -1.46
TIF1	YKR059W	MSG5	P38590	489 aa		5.96	□□□□□ -1.46
TIF1	YKR059W	DED81	P38707	554 aa	Known RBP	5.96	□□□□□ -1.46
TIF1	YKR059W	CHS7	P38843	316 aa		5.96	□□□□□ -1.46
TIF1	YKR059W	SPC97	P38863	823 aa		5.96	□□□□□ -1.46
TIF1	YKR059W	MPS2	P53159	387 aa		5.96	□□□□□ -1.46
TIF1	YKR059W	DSL1	P53847	754 aa		5.96	□□□□□ -1.46
TIF1	YKR059W	UTP6	Q02354	440 aa	Known RBP	5.96	□□□□□ -1.46
TIF1	YKR059W	VHS1	Q03785	461 aa		5.96	□□□□□ -1.46
TIF1	YKR059W	EMI1	Q04406	187 aa		5.96	□□□□□ -1.46
TIF1	YKR059W	IPK1	Q06667	281 aa		5.96	□□□□□ -1.46
TIF1	YKR059W	STE2	D6VTK4	431 aa		5.95	□□□□□ -1.46
TIF1	YKR059W	ADE5,7	P07244	802 aa	Known RBP	5.95	□□□□□ -1.46
TIF1	YKR059W	SPO12	P17123	173 aa		5.95	□□□□□ -1.46
TIF1	YKR059W	NUP1	P20676	1076 aa		5.95	□□□□□ -1.46
TIF1	YKR059W	IMP3	P32899	183 aa	Predicted RBP	5.95	□□□□□ -1.46
TIF1	YKR059W	SKN1	P33336	771 aa		5.95	□□□□□ -1.46
TIF1	YKR059W	ATP3	P38077	311 aa	Known RBP	5.95	□□□□□ -1.46
TIF1	YKR059W	LDB7	P38210	180 aa		5.95	□□□□□ -1.46
TIF1	YKR059W	APD1	P38281	316 aa		5.95	□□□□□ -1.46
TIF1	YKR059W	END3	P39013	349 aa		5.95	□□□□□ -1.46
TIF1	YKR059W	YEL073C	P39974	107 aa		5.95	□□□□□ -1.46
TIF1	YKR059W	PAC11	P40960	533 aa		5.95	□□□□□ -1.46
TIF1	YKR059W	LYS20	P48570	428 aa	Known RBP	5.95	□□□□□ -1.46
TIF1	YKR059W	FRE4	P53746	719 aa		5.95	□□□□□ -1.46
TIF1	YKR059W	NUP100	Q02629	959 aa		5.95	□□□□□ -1.46
TIF1	YKR059W	EKI1	Q03764	534 aa		5.95	□□□□□ -1.46
TIF1	YKR059W	GRS2	Q06817	618 aa		5.95	□□□□□ -1.46
TIF1	YKR059W	RDR1	Q08904	546 aa		5.95	□□□□□ -1.46
TIF1	YKR059W	ULA1	Q12059	462 aa		5.95	□□□□□ -1.46
TIF1	YKR059W	YOR012W	Q12351	137 aa		5.95	□□□□□ -1.46
TIF1	YKR059W	RRP12	Q12754	1228 aa	Known RBP	5.95	□□□□□ -1.46
TIF1	YKR059W	RPN13	O13563	156 aa		5.94	□□□□□ -1.46
TIF1	YKR059W	CDC21	P06785	304 aa		5.94	□□□□□ -1.46
TIF1	YKR059W	SEC62	P21825	274 aa		5.94	□□□□□ -1.46
TIF1	YKR059W	CTS1	P29029	562 aa		5.94	□□□□□ -1.46
TIF1	YKR059W	HXT1	P32465	570 aa		5.94	□□□□□ -1.46
TIF1	YKR059W	UBA4	P38820	440 aa		5.94	□□□□□ -1.46
TIF1	YKR059W	YJR011C	P47086	261 aa	Predicted RBP	5.94	□□□□□ -1.46
TIF1	YKR059W	GIS1	Q03833	894 aa		5.94	□□□□□ -1.46
TIF1	YKR059W	HSP31	Q04432	237 aa		5.94	□□□□□ -1.46
TIF1	YKR059W	SWF1	Q04629	336 aa		5.94	□□□□□ -1.46
TIF1	YKR059W	YMR310C	Q04867	317 aa	Predicted RBP	5.94	□□□□□ -1.46
TIF1	YKR059W	ADE13	Q05911	482 aa	Known RBP	5.94	□□□□□ -1.46
TIF1	YKR059W	YDR018C	Q12185	396 aa		5.94	□□□□□ -1.46
TIF1	YKR059W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.94	□□□□□ -1.46	not detected
TIF1	YKR059W	GLE1	Q12315	538 aa		5.94	□□□□□ -1.46
TIF1	YKR059W	VPS63	O13549	108 aa		5.93	□□□□□ -1.46
TIF1	YKR059W	PRP21	P32524	280 aa	Predicted RBP	5.93	□□□□□ -1.46
TIF1	YKR059W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.93	□□□□□ -1.46	not detected
TIF1	YKR059W	LAG1	P38703	411 aa		5.93	□□□□□ -1.46
TIF1	YKR059W	PEX18	P38855	283 aa		5.93	□□□□□ -1.46
TIF1	YKR059W	LYS1	P38998	373 aa	RIP-Chip data	5.93	□□□□□ -1.46	not detected
TIF1	YKR059W	TES1	P41903	349 aa	Known RBP	5.93	□□□□□ -1.46
TIF1	YKR059W	EMC2	P47133	292 aa	Known RBP	5.93	□□□□□ -1.46
TIF1	YKR059W	YGL114W	P53134	725 aa		5.93	□□□□□ -1.46
TIF1	YKR059W	TIM13	P53299	105 aa		5.93	□□□□□ -1.46
TIF1	YKR059W	PFA4	Q12006	378 aa		5.93	□□□□□ -1.46
TIF1	YKR059W	NCE102	Q12207	173 aa	RIP-Chip data	5.93	□□□□□ -1.46	not detected
TIF1	YKR059W	RUD3	Q12234	484 aa	Known RBP	5.93	□□□□□ -1.46
TIF1	YKR059W	APC2	Q12440	853 aa		5.93	□□□□□ -1.46
TIF1	YKR059W	MRPL23	Q12487	163 aa	Predicted RBP	5.93	□□□□□ -1.46
TIF1	YKR059W	YER145C-A	A0A023PYF4	145 aa		5.92	□□□□□ -1.46
TIF1	YKR059W	RAD10	P06838	210 aa		5.92	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 57.3 ms