RNA–Protein interactions for RNA: YKL021C

MAK11, Transcript of Protein involved in an early step of 60S ribosomal subunit biogenesis, yeast

Gene MAK11, Length 1,407 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MAK11	YKL021C	PAC11	P40960	533 aa		3.12	□□□□□ -1.91
MAK11	YKL021C	LCB2	P40970	561 aa		3.12	□□□□□ -1.91
MAK11	YKL021C	YGR018C	P53211	109 aa		3.12	□□□□□ -1.91
MAK11	YKL021C	YHC1	Q05900	231 aa	Known RBP	3.12	□□□□□ -1.91
MAK11	YKL021C	FCY22	Q12119	530 aa		3.12	□□□□□ -1.91
MAK11	YKL021C	RPN5	Q12250	445 aa	Known RBP	3.12	□□□□□ -1.91
MAK11	YKL021C	YDL199C	Q12407	687 aa		3.12	□□□□□ -1.91
MAK11	YKL021C	YBL111C	Q3E7Y5	667 aa		3.12	□□□□□ -1.91
MAK11	YKL021C	PSK1	P31374	1356 aa		3.12	□□□□□ -1.91
MAK11	YKL021C	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.12	□□□□□ -1.91
MAK11	YKL021C	RAD5	P32849	1169 aa	Predicted RBP	3.11	□□□□□ -1.91
MAK11	YKL021C	YNL208W	P40159	199 aa	Known RBP	3.11	□□□□□ -1.91
MAK11	YKL021C	YPS5	P53057	165 aa		3.11	□□□□□ -1.91
MAK11	YKL021C	ALF1	P53904	254 aa		3.11	□□□□□ -1.91
MAK11	YKL021C	YDR541C	Q03049	344 aa		3.11	□□□□□ -1.91
MAK11	YKL021C	ADH1	P00330	348 aa	Known RBP	3.1	□□□□□ -1.91
MAK11	YKL021C	RPL1A	P0CX43	217 aa	Known RBP	3.1	□□□□□ -1.91
MAK11	YKL021C	RPL1B	P0CX44	217 aa	Known RBP	3.1	□□□□□ -1.91
MAK11	YKL021C	TIR2	P33890	251 aa		3.1	□□□□□ -1.91
MAK11	YKL021C	GEP4	P38812	185 aa		3.1	□□□□□ -1.91
MAK11	YKL021C	HEM14	P40012	539 aa		3.1	□□□□□ -1.91
MAK11	YKL021C	KEG1	P43614	200 aa		3.1	□□□□□ -1.91
MAK11	YKL021C	IKI3	Q06706	1349 aa	Known RBP	3.1	□□□□□ -1.91
MAK11	YKL021C	ARF1	P11076	181 aa	Known RBP	3.1	□□□□□ -1.91
MAK11	YKL021C	ZRC1	P20107	442 aa		3.1	□□□□□ -1.91
MAK11	YKL021C	CHA1	P25379	360 aa	Known RBP	3.1	□□□□□ -1.91
MAK11	YKL021C	SPO23	P33757	523 aa		3.1	□□□□□ -1.91
MAK11	YKL021C	DOA1	P36037	715 aa		3.1	□□□□□ -1.91
MAK11	YKL021C	MRPL27	P36526	146 aa	Predicted RBP	3.1	□□□□□ -1.91
MAK11	YKL021C	MLH1	P38920	769 aa		3.1	□□□□□ -1.91
MAK11	YKL021C	RTT102	P53330	157 aa		3.1	□□□□□ -1.91
MAK11	YKL021C	VHS1	Q03785	461 aa		3.1	□□□□□ -1.91
MAK11	YKL021C	MCT1	Q12283	360 aa		3.1	□□□□□ -1.91
MAK11	YKL021C	RNA1	P11745	407 aa	Known RBP	3.09	□□□□□ -1.92
MAK11	YKL021C	PXA2	P34230	853 aa		3.09	□□□□□ -1.92
MAK11	YKL021C	ECM8	P38246	354 aa		3.09	□□□□□ -1.92
MAK11	YKL021C	YHR177W	P38867	453 aa		3.09	□□□□□ -1.92
MAK11	YKL021C	MNL1	P38888	796 aa		3.09	□□□□□ -1.92
MAK11	YKL021C	RSC1	P53236	928 aa		3.09	□□□□□ -1.92
MAK11	YKL021C	TRM112	P53738	135 aa	Predicted RBP	3.09	□□□□□ -1.92
MAK11	YKL021C	PCL9	Q12477	304 aa		3.09	□□□□□ -1.92
MAK11	YKL021C	HTZ1	Q12692	134 aa	Known RBP	3.09	□□□□□ -1.92
MAK11	YKL021C	FAB1	P34756	2278 aa		3.08	□□□□□ -1.92
MAK11	YKL021C	CBP6	P07253	162 aa	Predicted RBP	3.08	□□□□□ -1.92
MAK11	YKL021C	MRPS9	P38120	278 aa		3.08	□□□□□ -1.92
MAK11	YKL021C	PFF1	P38244	976 aa		3.08	□□□□□ -1.92
MAK11	YKL021C	IGD1	P43598	195 aa		3.08	□□□□□ -1.92
MAK11	YKL021C	LDS2	Q08218	356 aa		3.08	□□□□□ -1.92
MAK11	YKL021C	GPI18	P38211	433 aa		3.07	□□□□□ -1.92
MAK11	YKL021C	YGL262W	P53054	175 aa		3.07	□□□□□ -1.92
MAK11	YKL021C	MKC7	P53379	596 aa		3.07	□□□□□ -1.92
MAK11	YKL021C	APJ1	P53940	528 aa		3.07	□□□□□ -1.92
MAK11	YKL021C	AAD15	Q08361	143 aa		3.07	□□□□□ -1.92
MAK11	YKL021C	CMK2	P22517	447 aa		3.06	□□□□□ -1.92
MAK11	YKL021C	DEP1	P31385	405 aa		3.06	□□□□□ -1.92
MAK11	YKL021C	SPP381	P38282	291 aa	Predicted RBP	3.06	□□□□□ -1.92
MAK11	YKL021C	LRP1	P38801	184 aa	Known RBP	3.06	□□□□□ -1.92
MAK11	YKL021C	YJL055W	P47044	245 aa		3.06	□□□□□ -1.92
MAK11	YKL021C	YIP5	P53108	310 aa		3.06	□□□□□ -1.92
MAK11	YKL021C	REX2	P54964	269 aa	Known RBP	3.06	□□□□□ -1.92
MAK11	YKL021C	RNY1	Q02933	434 aa	Known RBP	3.06	□□□□□ -1.92
MAK11	YKL021C	ENT5	Q03769	411 aa	Known RBP	3.06	□□□□□ -1.92
MAK11	YKL021C	YPQ1	Q12010	308 aa		3.06	□□□□□ -1.92
MAK11	YKL021C	SLM3	Q12093	417 aa		3.06	□□□□□ -1.92
MAK11	YKL021C	PAR32	Q12515	295 aa	Known RBP	3.06	□□□□□ -1.92
MAK11	YKL021C	SEC27	P41811	889 aa	Known RBP	3.05	□□□□□ -1.92
MAK11	YKL021C	CTK3	P46963	296 aa	Predicted RBP	3.05	□□□□□ -1.92
MAK11	YKL021C	TPS1	Q00764	495 aa	Known RBP	3.05	□□□□□ -1.92
MAK11	YKL021C	IPK1	Q06667	281 aa		3.05	□□□□□ -1.92
MAK11	YKL021C	GAT3	Q07928	141 aa		3.05	□□□□□ -1.92
MAK11	YKL021C	ROM2	P51862	1356 aa	Known RBP	3.04	□□□□□ -1.92
MAK11	YKL021C	GIT1	P25346	518 aa		3.04	□□□□□ -1.92
MAK11	YKL021C	CIN2	P46670	268 aa		3.04	□□□□□ -1.92
MAK11	YKL021C	TRF5	P48561	642 aa	Known RBP	3.04	□□□□□ -1.92
MAK11	YKL021C	ASN2	P49090	572 aa	Known RBP	3.04	□□□□□ -1.92
MAK11	YKL021C	SEH1	P53011	349 aa	Known RBP	3.04	□□□□□ -1.92
MAK11	YKL021C	VAC7	P53950	1165 aa		3.04	□□□□□ -1.92
MAK11	YKL021C	YOR376W	Q08900	122 aa		3.04	□□□□□ -1.92
MAK11	YKL021C	MEX67	Q99257	599 aa	Known RBP	3.04	□□□□□ -1.92
MAK11	YKL021C	RPS24A	P0CX31	135 aa	Known RBP	3.03	□□□□□ -1.92
MAK11	YKL021C	RPS24B	P0CX32	135 aa	Known RBP	3.03	□□□□□ -1.92
MAK11	YKL021C	MNE1	P24720	663 aa		3.03	□□□□□ -1.92
MAK11	YKL021C	RRP7	P25368	297 aa	Predicted RBP	3.03	□□□□□ -1.92
MAK11	YKL021C	ANP1	P32629	500 aa		3.03	□□□□□ -1.92
MAK11	YKL021C	LSM12	P38828	187 aa	Known RBP	3.03	□□□□□ -1.92
MAK11	YKL021C	AIP1	P46680	615 aa	Known RBP	3.03	□□□□□ -1.92
MAK11	YKL021C	EAF6	P47128	113 aa		3.03	□□□□□ -1.92
MAK11	YKL021C	VHT1	P53241	593 aa		3.03	□□□□□ -1.92
MAK11	YKL021C	PRP38	Q00723	242 aa	Predicted RBP	3.03	□□□□□ -1.92
MAK11	YKL021C	ERO1	Q03103	563 aa		3.03	□□□□□ -1.92
MAK11	YKL021C	ECM11	Q04110	302 aa		3.03	□□□□□ -1.92
MAK11	YKL021C	PIN3	Q06449	215 aa		3.03	□□□□□ -1.92
MAK11	YKL021C	FOL3	Q12676	427 aa	Predicted RBP	3.03	□□□□□ -1.92
MAK11	YKL021C	RSF2	P46974	1380 aa		3.03	□□□□□ -1.92
MAK11	YKL021C	RPS18A	P0CX55	146 aa	Known RBP	3.02	□□□□□ -1.93
MAK11	YKL021C	RPS18B	P0CX56	146 aa	Predicted RBP	3.02	□□□□□ -1.93
MAK11	YKL021C	DPH2	P32461	534 aa		3.02	□□□□□ -1.93
MAK11	YKL021C	ECT1	P33412	323 aa		3.02	□□□□□ -1.93
MAK11	YKL021C	KAP104	P38217	918 aa	Known RBP	3.02	□□□□□ -1.93
MAK11	YKL021C	MSC3	Q05812	728 aa		3.02	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 66.2 ms