RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W MKC7P53379 596 aa4.7□□□□□ -1.66
MSH1YHR120W SNP1Q00916 300 aaPredicted RBP4.7□□□□□ -1.66
MSH1YHR120W DFG5Q05031 458 aa4.7□□□□□ -1.66
MSH1YHR120W YOL024WQ08172 172 aa4.7□□□□□ -1.66
MSH1YHR120W RPN5Q12250 445 aaKnown RBP4.7□□□□□ -1.66
MSH1YHR120W SFM1Q12314 213 aa4.7□□□□□ -1.66
MSH1YHR120W FAS1P07149 2051 aaKnown RBP4.69□□□□□ -1.66
MSH1YHR120W TIM9O74700 87 aa4.69□□□□□ -1.66
MSH1YHR120W YPT1P01123 206 aaKnown RBP4.69□□□□□ -1.66
MSH1YHR120W ALG7P07286 448 aa4.69□□□□□ -1.66
MSH1YHR120W SLY41P22215 453 aa4.69□□□□□ -1.66
MSH1YHR120W HIR2P32480 875 aa4.69□□□□□ -1.66
MSH1YHR120W PPQ1P32945 549 aa4.69□□□□□ -1.66
MSH1YHR120W SEF1P34228 1148 aa4.69□□□□□ -1.66
MSH1YHR120W UTP30P36144 274 aaKnown RBP4.69□□□□□ -1.66
MSH1YHR120W BUR6P40096 142 aa4.69□□□□□ -1.66
MSH1YHR120W YJL218WP40892 196 aaKnown RBP4.69□□□□□ -1.66
MSH1YHR120W ARF3P40994 183 aaRIP-Chip data4.69□□□□□ -1.66not detected
MSH1YHR120W HMS2P47175 358 aa4.69□□□□□ -1.66
MSH1YHR120W SCW11P53189 542 aa4.69□□□□□ -1.66
MSH1YHR120W REC102Q02721 264 aa4.69□□□□□ -1.66
MSH1YHR120W GRX5Q02784 150 aa4.69□□□□□ -1.66
MSH1YHR120W SYO1Q07395 620 aa4.69□□□□□ -1.66
MSH1YHR120W BDS1Q08347 646 aa4.69□□□□□ -1.66
MSH1YHR120W HTZ1Q12692 134 aaKnown RBP4.69□□□□□ -1.66
MSH1YHR120W YBL113CQ7M4S9 792 aa4.69□□□□□ -1.66
MSH1YHR120W TSC13Q99190 310 aa4.69□□□□□ -1.66
MSH1YHR120W PMT2P31382 759 aa4.69□□□□□ -1.66
MSH1YHR120W CAT2P32796 670 aaKnown RBP4.69□□□□□ -1.66
MSH1YHR120W ZRT3P34240 503 aa4.69□□□□□ -1.66
MSH1YHR120W ICE2P40499 491 aa4.69□□□□□ -1.66
MSH1YHR120W CAK1P43568 368 aaPredicted RBP4.69□□□□□ -1.66
MSH1YHR120W IRC7P43623 340 aa4.69□□□□□ -1.66
MSH1YHR120W ATF2P53296 535 aa4.69□□□□□ -1.66
MSH1YHR120W SUR7P54003 302 aa4.69□□□□□ -1.66
MSH1YHR120W OAZ1Q02803 292 aa4.69□□□□□ -1.66
MSH1YHR120W YDR514CQ04408 483 aa4.69□□□□□ -1.66
MSH1YHR120W MDM30Q05930 598 aa4.69□□□□□ -1.66
MSH1YHR120W BBP1Q12365 385 aa4.69□□□□□ -1.66
MSH1YHR120W MRX4Q12467 430 aa4.69□□□□□ -1.66
MSH1YHR120W GPM1P00950 247 aaKnown RBP4.68□□□□□ -1.66
MSH1YHR120W RPL24BP24000 155 aaKnown RBP4.68□□□□□ -1.66
MSH1YHR120W ORC2P32833 620 aa4.68□□□□□ -1.66
MSH1YHR120W IPI1P38803 334 aaPredicted RBP4.68□□□□□ -1.66
MSH1YHR120W TED1P40533 473 aa4.68□□□□□ -1.66
MSH1YHR120W YJR098CP47139 656 aa4.68□□□□□ -1.66
MSH1YHR120W LSG1P53145 640 aaKnown RBP4.68□□□□□ -1.66
MSH1YHR120W YPL071CQ02864 156 aa4.68□□□□□ -1.66
MSH1YHR120W NOG1Q02892 647 aaKnown RBP4.68□□□□□ -1.66
MSH1YHR120W GAD1Q04792 585 aa4.68□□□□□ -1.66
MSH1YHR120W ISR1Q06098 443 aaKnown RBP4.68□□□□□ -1.66
MSH1YHR120W YPQ2Q06328 317 aa4.68□□□□□ -1.66
MSH1YHR120W ATP4P05626 244 aa4.68□□□□□ -1.66
MSH1YHR120W HMG1P12683 1054 aa4.68□□□□□ -1.66
MSH1YHR120W NCP1P16603 691 aaKnown RBP4.68□□□□□ -1.66
MSH1YHR120W DBP3P20447 523 aaKnown RBP4.68□□□□□ -1.66
MSH1YHR120W IDH1P28834 360 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
MSH1YHR120W CTS1P29029 562 aa4.68□□□□□ -1.66
MSH1YHR120W RCY1P39531 840 aa4.68□□□□□ -1.66
MSH1YHR120W BOL3P39724 118 aa4.68□□□□□ -1.66
MSH1YHR120W PTI1P39927 425 aaPredicted RBP4.68□□□□□ -1.66
MSH1YHR120W RRG9P40156 214 aa4.68□□□□□ -1.66
MSH1YHR120W BAP3P41815 604 aa4.68□□□□□ -1.66
MSH1YHR120W SER2P42941 309 aa4.68□□□□□ -1.66
MSH1YHR120W IRC6P43615 237 aa4.68□□□□□ -1.66
MSH1YHR120W EXG2P52911 562 aa4.68□□□□□ -1.66
MSH1YHR120W TPN1P53099 579 aa4.68□□□□□ -1.66
MSH1YHR120W YML108WQ03759 105 aa4.68□□□□□ -1.66
MSH1YHR120W COA4Q05809 96 aa4.68□□□□□ -1.66
MSH1YHR120W SPO77Q06134 477 aa4.68□□□□□ -1.66
MSH1YHR120W ARO10Q06408 635 aa4.68□□□□□ -1.66
MSH1YHR120W PUN1Q06991 263 aa4.68□□□□□ -1.66
MSH1YHR120W AKR2Q12013 749 aa4.68□□□□□ -1.66
MSH1YHR120W SEC62P21825 274 aa4.67□□□□□ -1.66
MSH1YHR120W DBF2P22204 572 aa4.67□□□□□ -1.66
MSH1YHR120W ARE1P25628 610 aa4.67□□□□□ -1.66
MSH1YHR120W CPR3P25719 182 aa4.67□□□□□ -1.66
MSH1YHR120W SER3P40054 469 aa4.67□□□□□ -1.66
MSH1YHR120W UTP25P40498 721 aaKnown RBP4.67□□□□□ -1.66
MSH1YHR120W TSR2Q06672 205 aaKnown RBP4.67□□□□□ -1.66
MSH1YHR120W SIA1Q12212 622 aa4.67□□□□□ -1.66
MSH1YHR120W NFI1Q12216 726 aa4.67□□□□□ -1.66
MSH1YHR120W YLR126CQ12288 251 aa4.67□□□□□ -1.66
MSH1YHR120W PRP8P33334 2413 aaKnown RBP4.67□□□□□ -1.66
MSH1YHR120W GLK1P17709 500 aaKnown RBP4.67□□□□□ -1.66
MSH1YHR120W RPS1BP23248 255 aaKnown RBP4.67□□□□□ -1.66
MSH1YHR120W STP22P25604 385 aa4.67□□□□□ -1.66
MSH1YHR120W THI4P32318 326 aa4.67□□□□□ -1.66
MSH1YHR120W OAC1P32332 324 aa4.67□□□□□ -1.66
MSH1YHR120W DCG1P32460 244 aa4.67□□□□□ -1.66
MSH1YHR120W SSO1P32867 290 aa4.67□□□□□ -1.66
MSH1YHR120W PTR2P32901 601 aa4.67□□□□□ -1.66
MSH1YHR120W AUR1P36107 401 aaPredicted RBP4.67□□□□□ -1.66
MSH1YHR120W STP2P38704 541 aa4.67□□□□□ -1.66
MSH1YHR120W VPS52P39904 641 aa4.67□□□□□ -1.66
MSH1YHR120W CUP9P41817 306 aa4.67□□□□□ -1.66
MSH1YHR120W YAE1P47118 141 aaPredicted RBP4.67□□□□□ -1.66
MSH1YHR120W OCA1P50946 238 aaPredicted RBP4.67□□□□□ -1.66
MSH1YHR120W RBG2P53295 368 aaKnown RBP4.67□□□□□ -1.66
MSH1YHR120W MRPS16Q02608 121 aa4.67□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms