RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W SLY1P22213 666 aa3.17□□□□□ -1.9
PTI1YGR156W EXG1P23776 448 aaKnown RBP3.17□□□□□ -1.9
PTI1YGR156W DBR1P24309 405 aaKnown RBP3.17□□□□□ -1.9
PTI1YGR156W SPS22P25380 463 aa3.17□□□□□ -1.9
PTI1YGR156W PHA2P32452 334 aa3.17□□□□□ -1.9
PTI1YGR156W PPQ1P32945 549 aa3.17□□□□□ -1.9
PTI1YGR156W DOA1P36037 715 aa3.17□□□□□ -1.9
PTI1YGR156W MRPL40P36534 297 aa3.17□□□□□ -1.9
PTI1YGR156W ATP3P38077 311 aaKnown RBP3.17□□□□□ -1.9
PTI1YGR156W YBR056WP38081 501 aa3.17□□□□□ -1.9
PTI1YGR156W MNN9P39107 395 aaKnown RBP3.17□□□□□ -1.9
PTI1YGR156W JLP2P40206 208 aa3.17□□□□□ -1.9
PTI1YGR156W YMR134WP40207 237 aa3.17□□□□□ -1.9
PTI1YGR156W ATM1P40416 690 aa3.17□□□□□ -1.9
PTI1YGR156W LYS12P40495 371 aaKnown RBP3.17□□□□□ -1.9
PTI1YGR156W MSO1P53604 210 aaKnown RBP3.17□□□□□ -1.9
PTI1YGR156W ECM18Q04623 453 aa3.17□□□□□ -1.9
PTI1YGR156W YMR310CQ04867 317 aaPredicted RBP3.17□□□□□ -1.9
PTI1YGR156W ASA1Q06822 443 aa3.17□□□□□ -1.9
PTI1YGR156W THP3Q12049 470 aaKnown RBP3.17□□□□□ -1.9
PTI1YGR156W YOP1Q12402 180 aa3.17□□□□□ -1.9
PTI1YGR156W SET6Q12529 373 aa3.17□□□□□ -1.9
PTI1YGR156W FSH3Q99369 266 aa3.17□□□□□ -1.9
PTI1YGR156W TPK3P05986 398 aa3.16□□□□□ -1.9
PTI1YGR156W CAP2P13517 287 aa3.16□□□□□ -1.9
PTI1YGR156W MCK1P21965 375 aaKnown RBP3.16□□□□□ -1.9
PTI1YGR156W HXT2P23585 541 aa3.16□□□□□ -1.9
PTI1YGR156W RIB5P38145 238 aa3.16□□□□□ -1.9
PTI1YGR156W PEX32P38292 413 aa3.16□□□□□ -1.9
PTI1YGR156W RTT105P40063 208 aa3.16□□□□□ -1.9
PTI1YGR156W CDC40P40968 455 aaPredicted RBP3.16□□□□□ -1.9
PTI1YGR156W OST1P41543 476 aaKnown RBP3.16□□□□□ -1.9
PTI1YGR156W ADD37Q03233 198 aa3.16□□□□□ -1.9
PTI1YGR156W AIM33Q04516 312 aa3.16□□□□□ -1.9
PTI1YGR156W YDR262WQ12331 272 aa3.16□□□□□ -1.9
PTI1YGR156W TOM1Q03280 3268 aa3.15□□□□□ -1.9
PTI1YGR156W RPC40P07703 335 aaKnown RBP3.15□□□□□ -1.91
PTI1YGR156W OM45P16547 393 aa3.15□□□□□ -1.91
PTI1YGR156W HEM15P16622 393 aa3.15□□□□□ -1.91
PTI1YGR156W CKI1P20485 582 aa3.15□□□□□ -1.91
PTI1YGR156W FAR1P21268 830 aa3.15□□□□□ -1.91
PTI1YGR156W COX13P32799 129 aa3.15□□□□□ -1.91
PTI1YGR156W GPX2P38143 162 aa3.15□□□□□ -1.91
PTI1YGR156W CHK1P38147 527 aa3.15□□□□□ -1.91
PTI1YGR156W YBP1P38315 674 aa3.15□□□□□ -1.91
PTI1YGR156W TIF5P38431 405 aaKnown RBP3.15□□□□□ -1.91
PTI1YGR156W ALP1P38971 573 aa3.15□□□□□ -1.91
PTI1YGR156W AIM20P40451 204 aa3.15□□□□□ -1.91
PTI1YGR156W IDP2P41939 412 aa3.15□□□□□ -1.91
PTI1YGR156W YHC3P47040 408 aa3.15□□□□□ -1.91
PTI1YGR156W RPN14P53196 417 aa3.15□□□□□ -1.91
PTI1YGR156W CCE1Q03702 353 aa3.15□□□□□ -1.91
PTI1YGR156W HNT3Q08702 217 aa3.15□□□□□ -1.91
PTI1YGR156W SNX3Q08826 162 aaKnown RBP3.15□□□□□ -1.91
PTI1YGR156W MRPL8P22353 238 aa3.14□□□□□ -1.91
PTI1YGR156W KAR9P32526 644 aa3.14□□□□□ -1.91
PTI1YGR156W ZUO1P32527 433 aaKnown RBP3.14□□□□□ -1.91
PTI1YGR156W NAT2P37293 288 aa3.14□□□□□ -1.91
PTI1YGR156W MDM31P38880 579 aa3.14□□□□□ -1.91
PTI1YGR156W SNL1P40548 159 aa3.14□□□□□ -1.91
PTI1YGR156W YJL213WP40896 331 aa3.14□□□□□ -1.91
PTI1YGR156W SPR6Q01684 191 aa3.14□□□□□ -1.91
PTI1YGR156W EGD1Q02642 157 aaKnown RBP3.14□□□□□ -1.91
PTI1YGR156W MDM36Q06820 579 aa3.14□□□□□ -1.91
PTI1YGR156W TLG2Q08144 397 aa3.14□□□□□ -1.91
PTI1YGR156W YOL075CQ08234 1294 aa3.14□□□□□ -1.91
PTI1YGR156W YOR338WQ99326 363 aa3.14□□□□□ -1.91
PTI1YGR156W SSK22P25390 1331 aaPredicted RBP3.14□□□□□ -1.91
PTI1YGR156W CYC3P06182 269 aa3.13□□□□□ -1.91
PTI1YGR156W GDH1P07262 454 aaKnown RBP3.13□□□□□ -1.91
PTI1YGR156W CLN3P13365 580 aa3.13□□□□□ -1.91
PTI1YGR156W MXR2P25566 168 aa3.13□□□□□ -1.91
PTI1YGR156W MRP4P32902 394 aa3.13□□□□□ -1.91
PTI1YGR156W RIB7P33312 244 aa3.13□□□□□ -1.91
PTI1YGR156W MRPS5P33759 307 aa3.13□□□□□ -1.91
PTI1YGR156W TIR2P33890 251 aa3.13□□□□□ -1.91
PTI1YGR156W AVT5P38176 459 aa3.13□□□□□ -1.91
PTI1YGR156W PRP39P39682 629 aaKnown RBP3.13□□□□□ -1.91
PTI1YGR156W YFR018CP43599 363 aa3.13□□□□□ -1.91
PTI1YGR156W YGL114WP53134 725 aa3.13□□□□□ -1.91
PTI1YGR156W RRP46P53256 223 aaPredicted RBP3.13□□□□□ -1.91
PTI1YGR156W MTM1P53320 366 aa3.13□□□□□ -1.91
PTI1YGR156W UBX2Q04228 584 aa3.13□□□□□ -1.91
PTI1YGR156W GAT3Q07928 141 aa3.13□□□□□ -1.91
PTI1YGR156W SUP35P05453 685 aaKnown RBP3.12□□□□□ -1.91
PTI1YGR156W SSE1P32589 693 aaKnown RBP3.12□□□□□ -1.91
PTI1YGR156W MUD1P32605 298 aaKnown RBP3.12□□□□□ -1.91
PTI1YGR156W SBE22P38814 852 aa3.12□□□□□ -1.91
PTI1YGR156W MTC6P38849 526 aa3.12□□□□□ -1.91
PTI1YGR156W RIB4P50861 169 aaPredicted RBP3.12□□□□□ -1.91
PTI1YGR156W DBP6P53734 629 aaKnown RBP3.12□□□□□ -1.91
PTI1YGR156W WSC2P53832 503 aa3.12□□□□□ -1.91
PTI1YGR156W GOR1P53839 350 aa3.12□□□□□ -1.91
PTI1YGR156W YNL146WP53906 100 aa3.12□□□□□ -1.91
PTI1YGR156W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
PTI1YGR156W ARR1Q06596 294 aa3.12□□□□□ -1.91
PTI1YGR156W PAA1Q12447 191 aaKnown RBP3.12□□□□□ -1.91
PTI1YGR156W YER078W-AQ3E7A2 54 aa3.12□□□□□ -1.91
PTI1YGR156W YIL002W-AQ3E7Z5 69 aa3.12□□□□□ -1.91
PTI1YGR156W CPR1P14832 162 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms