RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W MBR1P23493 339 aa2.09□□□□□ -2.07
CBF2YGR140W MUD1P32605 298 aaKnown RBP2.09□□□□□ -2.07
CBF2YGR140W VAM7P32912 316 aa2.09□□□□□ -2.07
CBF2YGR140W YKL162CP36052 402 aa2.09□□□□□ -2.07
CBF2YGR140W DFG10P40526 253 aa2.09□□□□□ -2.07
CBF2YGR140W SNO3P43544 222 aa2.09□□□□□ -2.07
CBF2YGR140W AGP3P43548 558 aa2.09□□□□□ -2.07
CBF2YGR140W KEG1P43614 200 aa2.09□□□□□ -2.07
CBF2YGR140W TDA7P53882 636 aaPredicted RBP2.09□□□□□ -2.07
CBF2YGR140W ERG13P54839 491 aaKnown RBP2.09□□□□□ -2.07
CBF2YGR140W IZH1Q03419 316 aa2.09□□□□□ -2.07
CBF2YGR140W YPL199CQ08954 240 aa2.09□□□□□ -2.07
CBF2YGR140W YRA1Q12159 226 aaKnown RBP2.09□□□□□ -2.07
CBF2YGR140W HIS1P00498 297 aaKnown RBP2.09□□□□□ -2.08
CBF2YGR140W REV1P12689 985 aa2.09□□□□□ -2.08
CBF2YGR140W RRT12P25381 491 aa2.09□□□□□ -2.08
CBF2YGR140W RPS2P25443 254 aaKnown RBP2.09□□□□□ -2.08
CBF2YGR140W TIP1P27654 210 aaPredicted RBP2.09□□□□□ -2.08
CBF2YGR140W YPT35P38815 214 aaKnown RBP2.09□□□□□ -2.08
CBF2YGR140W PAC2P39937 518 aa2.09□□□□□ -2.08
CBF2YGR140W COX15P40086 486 aa2.09□□□□□ -2.08
CBF2YGR140W RFC4P40339 323 aaKnown RBP2.09□□□□□ -2.08
CBF2YGR140W YNL320WP42840 284 aa2.09□□□□□ -2.08
CBF2YGR140W FMP33P46998 180 aa2.09□□□□□ -2.08
CBF2YGR140W SFH5P47008 294 aa2.09□□□□□ -2.08
CBF2YGR140W YNR048WP53740 393 aa2.09□□□□□ -2.08
CBF2YGR140W ALG11P53954 548 aaKnown RBP2.09□□□□□ -2.08
CBF2YGR140W SED5Q01590 340 aa2.09□□□□□ -2.08
CBF2YGR140W ODC1Q03028 310 aa2.09□□□□□ -2.08
CBF2YGR140W SNZ1Q03148 297 aa2.09□□□□□ -2.08
CBF2YGR140W YMR209CQ03648 457 aa2.09□□□□□ -2.08
CBF2YGR140W CAC2Q04199 468 aa2.09□□□□□ -2.08
CBF2YGR140W RAX1Q08760 435 aa2.09□□□□□ -2.08
CBF2YGR140W APC9Q12107 265 aa2.09□□□□□ -2.08
CBF2YGR140W TPT1Q12272 230 aaKnown RBP2.09□□□□□ -2.08
CBF2YGR140W RRP42Q12277 265 aaPredicted RBP2.09□□□□□ -2.08
CBF2YGR140W TFC7Q12415 435 aa2.09□□□□□ -2.08
CBF2YGR140W CMC2Q3E7A4 109 aa2.09□□□□□ -2.08
CBF2YGR140W PAB1P04147 577 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
CBF2YGR140W MSF1P08425 469 aa2.08□□□□□ -2.08
CBF2YGR140W FRS2P15625 503 aaKnown RBP2.08□□□□□ -2.08
CBF2YGR140W SAM2P19358 384 aaKnown RBP2.08□□□□□ -2.08
CBF2YGR140W YEF1P32622 495 aa2.08□□□□□ -2.08
CBF2YGR140W COS9P36034 407 aa2.08□□□□□ -2.08
CBF2YGR140W MCR1P36060 302 aaKnown RBP2.08□□□□□ -2.08
CBF2YGR140W AIM29P36154 155 aa2.08□□□□□ -2.08
CBF2YGR140W CHK1P38147 527 aa2.08□□□□□ -2.08
CBF2YGR140W LDB7P38210 180 aa2.08□□□□□ -2.08
CBF2YGR140W YHK8P38776 514 aa2.08□□□□□ -2.08
CBF2YGR140W BIG1P38813 335 aa2.08□□□□□ -2.08
CBF2YGR140W VPS52P39904 641 aa2.08□□□□□ -2.08
CBF2YGR140W AVT1P47082 602 aa2.08□□□□□ -2.08
CBF2YGR140W HOP2P53187 214 aa2.08□□□□□ -2.08
CBF2YGR140W LST7P53237 242 aa2.08□□□□□ -2.08
CBF2YGR140W SUN4P53616 420 aa2.08□□□□□ -2.08
CBF2YGR140W KTR6P54070 446 aa2.08□□□□□ -2.08
CBF2YGR140W YAP7Q08182 245 aa2.08□□□□□ -2.08
CBF2YGR140W THI20Q08224 551 aa2.08□□□□□ -2.08
CBF2YGR140W YLR112WQ12130 139 aa2.08□□□□□ -2.08
CBF2YGR140W YDL009CQ12210 107 aa2.08□□□□□ -2.08
CBF2YGR140W YLR111WQ12528 110 aa2.08□□□□□ -2.08
CBF2YGR140W MATALPHA1P0CY06 175 aa2.08□□□□□ -2.08
CBF2YGR140W HMLALPHA1P0CY07 175 aa2.08□□□□□ -2.08
CBF2YGR140W POL30P15873 258 aaKnown RBP2.08□□□□□ -2.08
CBF2YGR140W STE18P18852 110 aa2.08□□□□□ -2.08
CBF2YGR140W DAL81P21657 970 aa2.08□□□□□ -2.08
CBF2YGR140W YCP4P25349 247 aaKnown RBP2.08□□□□□ -2.08
CBF2YGR140W ERG9P29704 444 aa2.08□□□□□ -2.08
CBF2YGR140W YKL097CP34245 136 aa2.08□□□□□ -2.08
CBF2YGR140W THI80P35202 319 aa2.08□□□□□ -2.08
CBF2YGR140W PRM9P39551 298 aa2.08□□□□□ -2.08
CBF2YGR140W COA1P40452 197 aa2.08□□□□□ -2.08
CBF2YGR140W GWT1P47026 490 aa2.08□□□□□ -2.08
CBF2YGR140W TAD2P47058 250 aa2.08□□□□□ -2.08
CBF2YGR140W IRC4Q03036 179 aa2.08□□□□□ -2.08
CBF2YGR140W CCE1Q03702 353 aa2.08□□□□□ -2.08
CBF2YGR140W OST6Q03723 332 aa2.08□□□□□ -2.08
CBF2YGR140W YLR283WQ05867 314 aa2.08□□□□□ -2.08
CBF2YGR140W ASR1Q06834 288 aa2.08□□□□□ -2.08
CBF2YGR140W ADH2P00331 348 aaKnown RBP2.08□□□□□ -2.08
CBF2YGR140W RPL27AP0C2H6 136 aaKnown RBP2.08□□□□□ -2.08
CBF2YGR140W RPL27BP0C2H7 136 aaKnown RBP2.08□□□□□ -2.08
CBF2YGR140W ZRC1P20107 442 aa2.08□□□□□ -2.08
CBF2YGR140W ZIP1P31111 875 aa2.08□□□□□ -2.08
CBF2YGR140W ZUO1P32527 433 aaKnown RBP2.08□□□□□ -2.08
CBF2YGR140W RAD5P32849 1169 aaPredicted RBP2.08□□□□□ -2.08
CBF2YGR140W ECM4P36156 370 aa2.08□□□□□ -2.08
CBF2YGR140W CCT4P39078 528 aaKnown RBP2.08□□□□□ -2.08
CBF2YGR140W YHB1P39676 399 aaKnown RBP2.08□□□□□ -2.08
CBF2YGR140W YIL169CP40442 995 aa2.08□□□□□ -2.08
CBF2YGR140W AZF1P41696 914 aa2.08□□□□□ -2.08
CBF2YGR140W RAD17P48581 401 aa2.08□□□□□ -2.08
CBF2YGR140W OKP1P53298 406 aa2.08□□□□□ -2.08
CBF2YGR140W MKC7P53379 596 aa2.08□□□□□ -2.08
CBF2YGR140W BIO4P53630 237 aa2.08□□□□□ -2.08
CBF2YGR140W NOP13P53883 403 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
CBF2YGR140W COX2P00410 251 aa2.07□□□□□ -2.08
CBF2YGR140W YPK2P18961 677 aa2.07□□□□□ -2.08
CBF2YGR140W UTR1P21373 530 aa2.07□□□□□ -2.08
CBF2YGR140W PBN1P25580 416 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 218.8 ms