RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA7, Length 357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA7	YGR020C	DTR1	P38125	572 aa		2.81	□□□□□ -1.96
VMA7	YGR020C	WSS1	P38838	269 aa		2.81	□□□□□ -1.96
VMA7	YGR020C	YLH47	Q06493	454 aa		2.81	□□□□□ -1.96
VMA7	YGR020C	LDB17	Q12342	491 aa		2.81	□□□□□ -1.96
VMA7	YGR020C	YOR338W	Q99326	363 aa		2.81	□□□□□ -1.96
VMA7	YGR020C	RPL23A	P0CX41	137 aa	Known RBP	2.8	□□□□□ -1.96
VMA7	YGR020C	RPL23B	P0CX42	137 aa	Known RBP	2.8	□□□□□ -1.96
VMA7	YGR020C	UNG1	P12887	359 aa		2.8	□□□□□ -1.96
VMA7	YGR020C	COS9	P36034	407 aa		2.8	□□□□□ -1.96
VMA7	YGR020C	YBL028C	P38202	106 aa		2.8	□□□□□ -1.96
VMA7	YGR020C	VEL1	P53058	206 aa		2.8	□□□□□ -1.96
VMA7	YGR020C	RNH201	P53942	307 aa		2.8	□□□□□ -1.96
VMA7	YGR020C	YFH1	Q07540	174 aa		2.8	□□□□□ -1.96
VMA7	YGR020C	YOR376W	Q08900	122 aa		2.8	□□□□□ -1.96
VMA7	YGR020C	SRO7	Q12038	1033 aa		2.8	□□□□□ -1.96
VMA7	YGR020C	YDR061W	Q12298	539 aa		2.8	□□□□□ -1.96
VMA7	YGR020C	RPS19A	P07280	144 aa	Known RBP	2.79	□□□□□ -1.96
VMA7	YGR020C	RPS19B	P07281	144 aa	Predicted RBP	2.79	□□□□□ -1.96
VMA7	YGR020C	MSP1	P28737	362 aa		2.79	□□□□□ -1.96
VMA7	YGR020C	EFB1	P32471	206 aa	Known RBP	2.79	□□□□□ -1.96
VMA7	YGR020C	LYS12	P40495	371 aa	Known RBP	2.79	□□□□□ -1.96
VMA7	YGR020C	SEC28	P40509	296 aa	Known RBP	2.79	□□□□□ -1.96
VMA7	YGR020C	BIO3	P50277	480 aa		2.79	□□□□□ -1.96
VMA7	YGR020C	GAS2	Q06135	555 aa		2.79	□□□□□ -1.96
VMA7	YGR020C	TIR4	Q12218	487 aa	Predicted RBP	2.79	□□□□□ -1.96
VMA7	YGR020C	RPL6B	P05739	176 aa	Known RBP	2.78	□□□□□ -1.96
VMA7	YGR020C	EPT1	P22140	391 aa		2.78	□□□□□ -1.96
VMA7	YGR020C	PSO2	P30620	661 aa		2.78	□□□□□ -1.96
VMA7	YGR020C	MSK1	P32048	576 aa		2.78	□□□□□ -1.96
VMA7	YGR020C	YKR015C	P36111	568 aa		2.78	□□□□□ -1.96
VMA7	YGR020C	SMP1	P38128	452 aa		2.78	□□□□□ -1.96
VMA7	YGR020C	ECM34	P38728	170 aa		2.78	□□□□□ -1.96
VMA7	YGR020C	YHR182W	P38870	785 aa		2.78	□□□□□ -1.96
VMA7	YGR020C	CDH1	P53197	566 aa		2.78	□□□□□ -1.96
VMA7	YGR020C	YGR067C	P53243	804 aa		2.78	□□□□□ -1.96
VMA7	YGR020C	RET3	P53600	189 aa		2.78	□□□□□ -1.96
VMA7	YGR020C	SLT2	Q00772	484 aa		2.78	□□□□□ -1.96
VMA7	YGR020C	RPL6A	Q02326	176 aa	Known RBP	2.78	□□□□□ -1.96
VMA7	YGR020C	PEX27	Q08580	376 aa		2.78	□□□□□ -1.96
VMA7	YGR020C	MIR1	P23641	311 aa	Known RBP	2.77	□□□□□ -1.97
VMA7	YGR020C	VAM7	P32912	316 aa		2.77	□□□□□ -1.97
VMA7	YGR020C	SLX1	P38324	304 aa		2.77	□□□□□ -1.97
VMA7	YGR020C	AIM23	P47015	356 aa		2.77	□□□□□ -1.97
VMA7	YGR020C	YJR054W	P47114	497 aa		2.77	□□□□□ -1.97
VMA7	YGR020C	YGR015C	P53208	328 aa		2.77	□□□□□ -1.97
VMA7	YGR020C	HST1	P53685	503 aa		2.77	□□□□□ -1.97
VMA7	YGR020C	RMI1	Q02685	241 aa		2.77	□□□□□ -1.97
VMA7	YGR020C	YPR078C	Q06813	372 aa		2.77	□□□□□ -1.97
VMA7	YGR020C	PRM7	Q12459	698 aa		2.77	□□□□□ -1.97
VMA7	YGR020C	DET1	Q99288	334 aa	Known RBP	2.77	□□□□□ -1.97
VMA7	YGR020C	DBR1	P24309	405 aa	Known RBP	2.76	□□□□□ -1.97
VMA7	YGR020C	PUP2	P32379	260 aa		2.76	□□□□□ -1.97
VMA7	YGR020C	FMT1	P32785	401 aa		2.76	□□□□□ -1.97
VMA7	YGR020C	SHE1	P38200	338 aa		2.76	□□□□□ -1.97
VMA7	YGR020C	SHE3	P38272	425 aa	Known RBP	2.76	□□□□□ -1.97
VMA7	YGR020C	GDT1	P38301	280 aa	Predicted RBP	2.76	□□□□□ -1.97
VMA7	YGR020C	JEM1	P40358	645 aa		2.76	□□□□□ -1.97
VMA7	YGR020C	SNL1	P40548	159 aa		2.76	□□□□□ -1.97
VMA7	YGR020C	YJR030C	P47101	745 aa		2.76	□□□□□ -1.97
VMA7	YGR020C	MRX11	Q03079	207 aa		2.76	□□□□□ -1.97
VMA7	YGR020C	SCH9	P11792	824 aa	Known RBP	2.75	□□□□□ -1.97
VMA7	YGR020C	PMT2	P31382	759 aa		2.75	□□□□□ -1.97
VMA7	YGR020C	RRT13	P40042	185 aa		2.75	□□□□□ -1.97
VMA7	YGR020C	PFS2	P42841	465 aa	Known RBP	2.75	□□□□□ -1.97
VMA7	YGR020C	STB1	P42845	420 aa		2.75	□□□□□ -1.97
VMA7	YGR020C	COQ5	P49017	307 aa		2.75	□□□□□ -1.97
VMA7	YGR020C	AIM33	Q04516	312 aa		2.75	□□□□□ -1.97
VMA7	YGR020C	YOL075C	Q08234	1294 aa		2.75	□□□□□ -1.97
VMA7	YGR020C	YOL085C	Q99345	113 aa		2.75	□□□□□ -1.97
VMA7	YGR020C	FSH3	Q99369	266 aa		2.75	□□□□□ -1.97
VMA7	YGR020C	RPS14A	P06367	137 aa	Known RBP	2.74	□□□□□ -1.97
VMA7	YGR020C	SPS19	P32573	292 aa	Known RBP	2.74	□□□□□ -1.97
VMA7	YGR020C	RPS14B	P39516	138 aa	Known RBP	2.74	□□□□□ -1.97
VMA7	YGR020C	FHL1	P39521	936 aa		2.74	□□□□□ -1.97
VMA7	YGR020C	LCP5	P40079	357 aa	Predicted RBP	2.74	□□□□□ -1.97
VMA7	YGR020C	MPS2	P53159	387 aa		2.74	□□□□□ -1.97
VMA7	YGR020C	TFB5	Q3E7C1	72 aa	Predicted RBP	2.74	□□□□□ -1.97
VMA7	YGR020C	UBA3	Q99344	299 aa		2.74	□□□□□ -1.97
VMA7	YGR020C	ZIP1	P31111	875 aa		2.73	□□□□□ -1.97
VMA7	YGR020C	TPS2	P31688	896 aa	Known RBP	2.73	□□□□□ -1.97
VMA7	YGR020C	YSW1	P38280	609 aa		2.73	□□□□□ -1.97
VMA7	YGR020C	YPT35	P38815	214 aa	Known RBP	2.73	□□□□□ -1.97
VMA7	YGR020C	DDC1	Q08949	612 aa		2.73	□□□□□ -1.97
VMA7	YGR020C	SLF1	Q12034	447 aa	Known RBP	2.73	□□□□□ -1.97
VMA7	YGR020C	FAB1	P34756	2278 aa		2.73	□□□□□ -1.97
VMA7	YGR020C	FAR1	P21268	830 aa		2.72	□□□□□ -1.97
VMA7	YGR020C	FAA1	P30624	700 aa	Known RBP	2.72	□□□□□ -1.97
VMA7	YGR020C	CCH1	P50077	2039 aa		2.72	□□□□□ -1.97
VMA7	YGR020C	LST7	P53237	242 aa		2.72	□□□□□ -1.97
VMA7	YGR020C	TRM82	Q03774	444 aa		2.72	□□□□□ -1.97
VMA7	YGR020C	SLM3	Q12093	417 aa		2.72	□□□□□ -1.97
VMA7	YGR020C	FRE8	Q12209	686 aa		2.72	□□□□□ -1.97
VMA7	YGR020C	YPS3	Q12303	508 aa		2.72	□□□□□ -1.97
VMA7	YGR020C	STE2	D6VTK4	431 aa		2.71	□□□□□ -1.98
VMA7	YGR020C	RPS16A	P0CX51	143 aa	Known RBP	2.71	□□□□□ -1.98
VMA7	YGR020C	RPS16B	P0CX52	143 aa	Known RBP	2.71	□□□□□ -1.98
VMA7	YGR020C	DAP2	P18962	818 aa		2.71	□□□□□ -1.98
VMA7	YGR020C	UBA1	P22515	1024 aa	Known RBP	2.71	□□□□□ -1.98
VMA7	YGR020C	RXT2	P38255	430 aa		2.71	□□□□□ -1.98
VMA7	YGR020C	RBG1	P39729	369 aa		2.71	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms