RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C RPL21BQ12672 160 aaKnown RBP1.39□□□□□ -2.19
RTR1YER139C SRN2Q99176 213 aa1.39□□□□□ -2.19
RTR1YER139C TPI1P00942 248 aaKnown RBP1.38□□□□□ -2.19
RTR1YER139C RPL6BP05739 176 aaKnown RBP1.38□□□□□ -2.19
RTR1YER139C HEM4P06174 275 aa1.38□□□□□ -2.19
RTR1YER139C RPS19AP07280 144 aaKnown RBP1.38□□□□□ -2.19
RTR1YER139C RPS19BP07281 144 aaPredicted RBP1.38□□□□□ -2.19
RTR1YER139C ASP3-2P0CX77 362 aa1.38□□□□□ -2.19
RTR1YER139C ASP3-3P0CX78 362 aa1.38□□□□□ -2.19
RTR1YER139C ASP3-4P0CX79 362 aa1.38□□□□□ -2.19
RTR1YER139C ASP3-1P0CZ17 362 aa1.38□□□□□ -2.19
RTR1YER139C RPL16AP26784 199 aaKnown RBP1.38□□□□□ -2.19
RTR1YER139C YBR241CP38142 488 aa1.38□□□□□ -2.19
RTR1YER139C YBL028CP38202 106 aa1.38□□□□□ -2.19
RTR1YER139C PEX22P39718 180 aa1.38□□□□□ -2.19
RTR1YER139C SEC28P40509 296 aaKnown RBP1.38□□□□□ -2.19
RTR1YER139C MLC1P53141 149 aa1.38□□□□□ -2.19
RTR1YER139C YGR067CP53243 804 aa1.38□□□□□ -2.19
RTR1YER139C CWC22P53333 577 aaKnown RBP1.38□□□□□ -2.19
RTR1YER139C PRP38Q00723 242 aaPredicted RBP1.38□□□□□ -2.19
RTR1YER139C RPL6AQ02326 176 aaKnown RBP1.38□□□□□ -2.19
RTR1YER139C YDR115WQ04598 105 aa1.38□□□□□ -2.19
RTR1YER139C GAS2Q06135 555 aa1.38□□□□□ -2.19
RTR1YER139C SHS1Q07657 551 aa1.38□□□□□ -2.19
RTR1YER139C TIR4Q12218 487 aaPredicted RBP1.38□□□□□ -2.19
RTR1YER139C MCT1Q12283 360 aa1.38□□□□□ -2.19
RTR1YER139C CHA1P25379 360 aaKnown RBP1.37□□□□□ -2.19
RTR1YER139C SSE1P32589 693 aaKnown RBP1.37□□□□□ -2.19
RTR1YER139C PDC2P32896 925 aa1.37□□□□□ -2.19
RTR1YER139C COS9P36034 407 aa1.37□□□□□ -2.19
RTR1YER139C GDT1P38301 280 aaPredicted RBP1.37□□□□□ -2.19
RTR1YER139C HEM14P40012 539 aa1.37□□□□□ -2.19
RTR1YER139C JEM1P40358 645 aa1.37□□□□□ -2.19
RTR1YER139C LYS12P40495 371 aaKnown RBP1.37□□□□□ -2.19
RTR1YER139C SNL1P40548 159 aa1.37□□□□□ -2.19
RTR1YER139C KEG1P43614 200 aa1.37□□□□□ -2.19
RTR1YER139C CTK3P46963 296 aaPredicted RBP1.37□□□□□ -2.19
RTR1YER139C VEL1P53058 206 aa1.37□□□□□ -2.19
RTR1YER139C YLH47Q06493 454 aa1.37□□□□□ -2.19
RTR1YER139C YFH1Q07540 174 aa1.37□□□□□ -2.19
RTR1YER139C NOP6Q07623 225 aaKnown RBP1.37□□□□□ -2.19
RTR1YER139C PEX27Q08580 376 aa1.37□□□□□ -2.19
RTR1YER139C YDL109CQ12103 647 aa1.37□□□□□ -2.19
RTR1YER139C HIF1Q12373 385 aa1.37□□□□□ -2.19
RTR1YER139C RPL23AP0CX41 137 aaKnown RBP1.36□□□□□ -2.19
RTR1YER139C RPL23BP0CX42 137 aaKnown RBP1.36□□□□□ -2.19
RTR1YER139C DBR1P24309 405 aaKnown RBP1.36□□□□□ -2.19
RTR1YER139C LDS1P31379 325 aa1.36□□□□□ -2.19
RTR1YER139C MSK1P32048 576 aa1.36□□□□□ -2.19
RTR1YER139C SWI3P32591 825 aa1.36□□□□□ -2.19
RTR1YER139C ANP1P32629 500 aa1.36□□□□□ -2.19
RTR1YER139C TOA1P32773 286 aa1.36□□□□□ -2.19
RTR1YER139C RXT2P38255 430 aa1.36□□□□□ -2.19
RTR1YER139C YHR182WP38870 785 aa1.36□□□□□ -2.19
RTR1YER139C SEH1P53011 349 aaKnown RBP1.36□□□□□ -2.19
RTR1YER139C CDH1P53197 566 aa1.36□□□□□ -2.19
RTR1YER139C VHT1P53241 593 aa1.36□□□□□ -2.19
RTR1YER139C RNH201P53942 307 aa1.36□□□□□ -2.19
RTR1YER139C VAC7P53950 1165 aa1.36□□□□□ -2.19
RTR1YER139C RCF1Q03713 159 aa1.36□□□□□ -2.19
RTR1YER139C YOL075CQ08234 1294 aa1.36□□□□□ -2.19
RTR1YER139C SRO7Q12038 1033 aa1.36□□□□□ -2.19
RTR1YER139C ATP16Q12165 160 aa1.36□□□□□ -2.19
RTR1YER139C SFM1Q12314 213 aa1.36□□□□□ -2.19
RTR1YER139C DET1Q99288 334 aaKnown RBP1.36□□□□□ -2.19
RTR1YER139C RPS14AP06367 137 aaKnown RBP1.35□□□□□ -2.19
RTR1YER139C SCH9P11792 824 aaKnown RBP1.35□□□□□ -2.19
RTR1YER139C OPI1P21957 404 aa1.35□□□□□ -2.19
RTR1YER139C EPT1P22140 391 aa1.35□□□□□ -2.19
RTR1YER139C PSO2P30620 661 aa1.35□□□□□ -2.19
RTR1YER139C EFB1P32471 206 aaKnown RBP1.35□□□□□ -2.19
RTR1YER139C YSW1P38280 609 aa1.35□□□□□ -2.19
RTR1YER139C RPS14BP39516 138 aaKnown RBP1.35□□□□□ -2.19
RTR1YER139C FHL1P39521 936 aa1.35□□□□□ -2.19
RTR1YER139C STB1P42845 420 aa1.35□□□□□ -2.19
RTR1YER139C AIM23P47015 356 aa1.35□□□□□ -2.19
RTR1YER139C YJR030CP47101 745 aa1.35□□□□□ -2.19
RTR1YER139C MPS2P53159 387 aa1.35□□□□□ -2.19
RTR1YER139C SLT2Q00772 484 aa1.35□□□□□ -2.19
RTR1YER139C AIM33Q04516 312 aa1.35□□□□□ -2.19
RTR1YER139C YOR376WQ08900 122 aa1.35□□□□□ -2.19
RTR1YER139C GLE1Q12315 538 aa1.35□□□□□ -2.19
RTR1YER139C LDB17Q12342 491 aa1.35□□□□□ -2.19
RTR1YER139C FRE6Q12473 712 aa1.35□□□□□ -2.19
RTR1YER139C TFB5Q3E7C1 72 aaPredicted RBP1.35□□□□□ -2.19
RTR1YER139C FSH3Q99369 266 aa1.35□□□□□ -2.19
RTR1YER139C UNG1P12887 359 aa1.34□□□□□ -2.19
RTR1YER139C DAP2P18962 818 aa1.34□□□□□ -2.19
RTR1YER139C UBA1P22515 1024 aaKnown RBP1.34□□□□□ -2.19
RTR1YER139C FAA1P30624 700 aaKnown RBP1.34□□□□□ -2.19
RTR1YER139C PUP2P32379 260 aa1.34□□□□□ -2.19
RTR1YER139C YKR015CP36111 568 aa1.34□□□□□ -2.19
RTR1YER139C SMP1P38128 452 aa1.34□□□□□ -2.19
RTR1YER139C ECM34P38728 170 aa1.34□□□□□ -2.19
RTR1YER139C YJR054WP47114 497 aa1.34□□□□□ -2.19
RTR1YER139C BIO3P50277 480 aa1.34□□□□□ -2.19
RTR1YER139C RET3P53600 189 aa1.34□□□□□ -2.19
RTR1YER139C EOS1P53938 366 aa1.34□□□□□ -2.19
RTR1YER139C MRX11Q03079 207 aa1.34□□□□□ -2.19
RTR1YER139C SPT7P35177 1332 aa1.34□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms