RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W FSH3Q99369 266 aa2.96□□□□□ -1.94
LSM4YER112W CHA1P25379 360 aaKnown RBP2.95□□□□□ -1.94
LSM4YER112W MRPS9P38120 278 aa2.95□□□□□ -1.94
LSM4YER112W ALD5P40047 520 aaKnown RBP2.95□□□□□ -1.94
LSM4YER112W CIN2P46670 268 aa2.95□□□□□ -1.94
LSM4YER112W YPS5P53057 165 aa2.95□□□□□ -1.94
LSM4YER112W VHT1P53241 593 aa2.95□□□□□ -1.94
LSM4YER112W PRP38Q00723 242 aaPredicted RBP2.95□□□□□ -1.94
LSM4YER112W UTP6Q02354 440 aaKnown RBP2.95□□□□□ -1.94
LSM4YER112W ENT5Q03769 411 aaKnown RBP2.95□□□□□ -1.94
LSM4YER112W AIM33Q04516 312 aa2.95□□□□□ -1.94
LSM4YER112W FSH2Q05015 223 aa2.95□□□□□ -1.94
LSM4YER112W YLH47Q06493 454 aa2.95□□□□□ -1.94
LSM4YER112W MCH1Q07376 486 aa2.95□□□□□ -1.94
LSM4YER112W NFI1Q12216 726 aa2.95□□□□□ -1.94
LSM4YER112W CMK2P22517 447 aa2.94□□□□□ -1.94
LSM4YER112W COS9P36034 407 aa2.94□□□□□ -1.94
LSM4YER112W KEG1P43614 200 aa2.94□□□□□ -1.94
LSM4YER112W YJR030CP47101 745 aa2.94□□□□□ -1.94
LSM4YER112W PRM1P53835 661 aa2.94□□□□□ -1.94
LSM4YER112W YNL143CP53908 130 aa2.94□□□□□ -1.94
LSM4YER112W AQR1P53943 586 aa2.94□□□□□ -1.94
LSM4YER112W VAC7P53950 1165 aa2.94□□□□□ -1.94
LSM4YER112W TPS1Q00764 495 aaKnown RBP2.94□□□□□ -1.94
LSM4YER112W RRB1Q04225 511 aaKnown RBP2.94□□□□□ -1.94
LSM4YER112W LDB17Q12342 491 aa2.94□□□□□ -1.94
LSM4YER112W SFG1Q12507 346 aa2.94□□□□□ -1.94
LSM4YER112W CBP6P07253 162 aaPredicted RBP2.93□□□□□ -1.94
LSM4YER112W RPL23AP0CX41 137 aaKnown RBP2.93□□□□□ -1.94
LSM4YER112W RPL23BP0CX42 137 aaKnown RBP2.93□□□□□ -1.94
LSM4YER112W GRR1P24814 1151 aa2.93□□□□□ -1.94
LSM4YER112W SIF2P38262 535 aa2.93□□□□□ -1.94
LSM4YER112W PEX22P39718 180 aa2.93□□□□□ -1.94
LSM4YER112W CTK3P46963 296 aaPredicted RBP2.93□□□□□ -1.94
LSM4YER112W AIM45Q12480 344 aaKnown RBP2.93□□□□□ -1.94
LSM4YER112W UBA3Q99344 299 aa2.93□□□□□ -1.94
LSM4YER112W ASP3-2P0CX77 362 aa2.92□□□□□ -1.94
LSM4YER112W ASP3-3P0CX78 362 aa2.92□□□□□ -1.94
LSM4YER112W ASP3-4P0CX79 362 aa2.92□□□□□ -1.94
LSM4YER112W ASP3-1P0CZ17 362 aa2.92□□□□□ -1.94
LSM4YER112W POT1P27796 417 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
LSM4YER112W YEL043WP32618 956 aa2.92□□□□□ -1.94
LSM4YER112W WSC4P38739 605 aa2.92□□□□□ -1.94
LSM4YER112W YPT35P38815 214 aaKnown RBP2.92□□□□□ -1.94
LSM4YER112W RBG1P39729 369 aa2.92□□□□□ -1.94
LSM4YER112W YGL262WP53054 175 aa2.92□□□□□ -1.94
LSM4YER112W LST7P53237 242 aa2.92□□□□□ -1.94
LSM4YER112W ECM11Q04110 302 aa2.92□□□□□ -1.94
LSM4YER112W SMP3Q04174 516 aa2.92□□□□□ -1.94
LSM4YER112W YOL075CQ08234 1294 aa2.92□□□□□ -1.94
LSM4YER112W APC5Q08683 685 aa2.92□□□□□ -1.94
LSM4YER112W YPQ1Q12010 308 aa2.92□□□□□ -1.94
LSM4YER112W ATP16Q12165 160 aa2.92□□□□□ -1.94
LSM4YER112W MCT1Q12283 360 aa2.92□□□□□ -1.94
LSM4YER112W DET1Q99288 334 aaKnown RBP2.92□□□□□ -1.94
LSM4YER112W RPS16AP0CX51 143 aaKnown RBP2.91□□□□□ -1.94
LSM4YER112W RPS16BP0CX52 143 aaKnown RBP2.91□□□□□ -1.94
LSM4YER112W UNG1P12887 359 aa2.91□□□□□ -1.94
LSM4YER112W TAL1P15019 335 aaKnown RBP2.91□□□□□ -1.94
LSM4YER112W ARF2P19146 181 aaKnown RBP2.91□□□□□ -1.94
LSM4YER112W MIR1P23641 311 aaKnown RBP2.91□□□□□ -1.94
LSM4YER112W ANP1P32629 500 aa2.91□□□□□ -1.94
LSM4YER112W SEO1P39709 593 aa2.91□□□□□ -1.94
LSM4YER112W EFM3P47163 339 aa2.91□□□□□ -1.94
LSM4YER112W CUE3P53137 624 aaKnown RBP2.91□□□□□ -1.94
LSM4YER112W RNH201P53942 307 aa2.91□□□□□ -1.94
LSM4YER112W GAS2Q06135 555 aa2.91□□□□□ -1.94
LSM4YER112W YLR177WQ06251 628 aa2.91□□□□□ -1.94
LSM4YER112W STE3P06783 470 aa2.9□□□□□ -1.95
LSM4YER112W CKI1P20485 582 aa2.9□□□□□ -1.95
LSM4YER112W FAR1P21268 830 aa2.9□□□□□ -1.95
LSM4YER112W TOA1P32773 286 aa2.9□□□□□ -1.95
LSM4YER112W PTK1P36002 662 aaPredicted RBP2.9□□□□□ -1.95
LSM4YER112W UIP5P36137 443 aa2.9□□□□□ -1.95
LSM4YER112W MRPL27P36526 146 aaPredicted RBP2.9□□□□□ -1.95
LSM4YER112W YHR122WP38829 231 aa2.9□□□□□ -1.95
LSM4YER112W YIL089WP40500 205 aa2.9□□□□□ -1.95
LSM4YER112W YNL320WP42840 284 aa2.9□□□□□ -1.95
LSM4YER112W YHC3P47040 408 aa2.9□□□□□ -1.95
LSM4YER112W PDR16P53860 351 aaKnown RBP2.9□□□□□ -1.95
LSM4YER112W SLT2Q00772 484 aa2.9□□□□□ -1.95
LSM4YER112W YDR115WQ04598 105 aa2.9□□□□□ -1.95
LSM4YER112W RGS2Q99188 309 aa2.9□□□□□ -1.95
LSM4YER112W OPI1P21957 404 aa2.89□□□□□ -1.95
LSM4YER112W SMI1P32566 505 aa2.89□□□□□ -1.95
LSM4YER112W MRPS5P33759 307 aa2.89□□□□□ -1.95
LSM4YER112W YBR241CP38142 488 aa2.89□□□□□ -1.95
LSM4YER112W CAJ1P39101 391 aa2.89□□□□□ -1.95
LSM4YER112W YMR134WP40207 237 aa2.89□□□□□ -1.95
LSM4YER112W AIM23P47015 356 aa2.89□□□□□ -1.95
LSM4YER112W ARR1Q06596 294 aa2.89□□□□□ -1.95
LSM4YER112W SAG1P20840 650 aa2.88□□□□□ -1.95
LSM4YER112W ECT1P33412 323 aa2.88□□□□□ -1.95
LSM4YER112W IST2P38250 946 aa2.88□□□□□ -1.95
LSM4YER112W SHE3P38272 425 aaKnown RBP2.88□□□□□ -1.95
LSM4YER112W HEM14P40012 539 aa2.88□□□□□ -1.95
LSM4YER112W MOB2P43563 287 aa2.88□□□□□ -1.95
LSM4YER112W YFL012WP43580 148 aa2.88□□□□□ -1.95
LSM4YER112W BIO3P50277 480 aa2.88□□□□□ -1.95
LSM4YER112W SEH1P53011 349 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms