RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	SRP72	P38688	640 aa	Known RBP	1.74	□□□□□ -2.13
DOT6	YER088C	INM1	P38710	295 aa		1.74	□□□□□ -2.13
DOT6	YER088C	AIM10	P39965	576 aa	Known RBP	1.74	□□□□□ -2.13
DOT6	YER088C	UTP18	P40362	594 aa	Predicted RBP	1.74	□□□□□ -2.13
DOT6	YER088C	MRM2	P53123	320 aa		1.74	□□□□□ -2.13
DOT6	YER088C	LIF1	P53150	421 aa		1.74	□□□□□ -2.13
DOT6	YER088C	SHY1	P53266	389 aa		1.74	□□□□□ -2.13
DOT6	YER088C	RRN9	P53437	365 aa		1.74	□□□□□ -2.13
DOT6	YER088C	PEX25	Q02969	394 aa		1.74	□□□□□ -2.13
DOT6	YER088C	SPE3	Q12074	293 aa	Known RBP	1.74	□□□□□ -2.13
DOT6	YER088C	YGK3	Q12222	375 aa	Predicted RBP	1.74	□□□□□ -2.13
DOT6	YER088C	NCA2	Q12374	616 aa		1.74	□□□□□ -2.13
DOT6	YER088C	IZH2	Q12442	317 aa		1.74	□□□□□ -2.13
DOT6	YER088C	RPL12A	P0CX53	165 aa	Known RBP	1.73	□□□□□ -2.13
DOT6	YER088C	RPL12B	P0CX54	165 aa		1.73	□□□□□ -2.13
DOT6	YER088C	MSI1	P13712	422 aa		1.73	□□□□□ -2.13
DOT6	YER088C	RPB5	P20434	215 aa		1.73	□□□□□ -2.13
DOT6	YER088C	NUP2	P32499	720 aa		1.73	□□□□□ -2.13
DOT6	YER088C	PRS1	P32895	427 aa	Known RBP	1.73	□□□□□ -2.13
DOT6	YER088C	SKN1	P33336	771 aa		1.73	□□□□□ -2.13
DOT6	YER088C	ANR2	P36090	516 aa	Predicted RBP	1.73	□□□□□ -2.13
DOT6	YER088C	QDR3	P38227	689 aa		1.73	□□□□□ -2.13
DOT6	YER088C	VPS45	P38932	577 aa		1.73	□□□□□ -2.13
DOT6	YER088C	YER079W	P40052	210 aa	Known RBP	1.73	□□□□□ -2.13
DOT6	YER088C	STE24	P47154	453 aa		1.73	□□□□□ -2.13
DOT6	YER088C	RSC1	P53236	928 aa		1.73	□□□□□ -2.13
DOT6	YER088C	TDA1	Q03533	586 aa		1.73	□□□□□ -2.13
DOT6	YER088C	GYL1	Q04322	720 aa		1.73	□□□□□ -2.13
DOT6	YER088C	YDL144C	Q07589	356 aa		1.73	□□□□□ -2.13
DOT6	YER088C	NSE1	Q07913	336 aa		1.73	□□□□□ -2.13
DOT6	YER088C	DCI1	Q08558	271 aa		1.73	□□□□□ -2.13
DOT6	YER088C	RPN5	Q12250	445 aa	Known RBP	1.73	□□□□□ -2.13
DOT6	YER088C	RPL1A	P0CX43	217 aa	Known RBP	1.73	□□□□□ -2.13
DOT6	YER088C	RPL1B	P0CX44	217 aa	Known RBP	1.73	□□□□□ -2.13
DOT6	YER088C	YEF1	P32622	495 aa		1.73	□□□□□ -2.13
DOT6	YER088C	PXA2	P34230	853 aa		1.73	□□□□□ -2.13
DOT6	YER088C	TVP38	P36164	337 aa		1.73	□□□□□ -2.13
DOT6	YER088C	MRPL10	P36520	322 aa		1.73	□□□□□ -2.13
DOT6	YER088C	MLH1	P38920	769 aa		1.73	□□□□□ -2.13
DOT6	YER088C	COX14	P39103	70 aa		1.73	□□□□□ -2.13
DOT6	YER088C	MIG3	P39943	394 aa		1.73	□□□□□ -2.13
DOT6	YER088C	LSB1	P53281	241 aa		1.73	□□□□□ -2.13
DOT6	YER088C	MTQ1	P53944	314 aa		1.73	□□□□□ -2.13
DOT6	YER088C	CIK1	Q01649	594 aa		1.73	□□□□□ -2.13
DOT6	YER088C	PRP3	Q03338	469 aa	Predicted RBP	1.73	□□□□□ -2.13
DOT6	YER088C	RIF2	Q06208	395 aa		1.73	□□□□□ -2.13
DOT6	YER088C	NCB2	Q92317	146 aa		1.73	□□□□□ -2.13
DOT6	YER088C	MSB2	P32334	1306 aa		1.72	□□□□□ -2.13
DOT6	YER088C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	1.72	□□□□□ -2.13	not detected
DOT6	YER088C	DST1	P07273	309 aa		1.72	□□□□□ -2.13
DOT6	YER088C	NOP1	P15646	327 aa	Known RBP	1.72	□□□□□ -2.13
DOT6	YER088C	COQ1	P18900	473 aa		1.72	□□□□□ -2.13
DOT6	YER088C	YSC83	P32792	385 aa		1.72	□□□□□ -2.13
DOT6	YER088C	MYO3	P36006	1272 aa		1.72	□□□□□ -2.13
DOT6	YER088C	GPX2	P38143	162 aa		1.72	□□□□□ -2.13
DOT6	YER088C	BAT1	P38891	393 aa	Known RBP	1.72	□□□□□ -2.13
DOT6	YER088C	EFM4	P40516	257 aa		1.72	□□□□□ -2.13
DOT6	YER088C	YIL029C	P40538	142 aa		1.72	□□□□□ -2.13
DOT6	YER088C	ATG18	P43601	500 aa		1.72	□□□□□ -2.13
DOT6	YER088C	LCB3	P47013	409 aa		1.72	□□□□□ -2.13
DOT6	YER088C	ABM1	P47146	123 aa		1.72	□□□□□ -2.13
DOT6	YER088C	PGU1	P47180	361 aa		1.72	□□□□□ -2.13
DOT6	YER088C	MLC1	P53141	149 aa		1.72	□□□□□ -2.13
DOT6	YER088C	MST27	P53176	234 aa		1.72	□□□□□ -2.13
DOT6	YER088C	MEH1	Q02205	184 aa		1.72	□□□□□ -2.13
DOT6	YER088C	URC2	Q04411	772 aa		1.72	□□□□□ -2.13
DOT6	YER088C	RTN1	Q04947	295 aa	Known RBP	1.72	□□□□□ -2.13
DOT6	YER088C	ECM7	Q06200	448 aa		1.72	□□□□□ -2.13
DOT6	YER088C	MFG1	Q07684	458 aa		1.72	□□□□□ -2.13
DOT6	YER088C	JID1	Q12350	301 aa		1.72	□□□□□ -2.13
DOT6	YER088C	ERP4	Q12450	207 aa		1.72	□□□□□ -2.13
DOT6	YER088C	MEX67	Q99257	599 aa	Known RBP	1.72	□□□□□ -2.13
DOT6	YER088C	CDC21	P06785	304 aa		1.71	□□□□□ -2.14
DOT6	YER088C	ATP1	P07251	545 aa	Known RBP	1.71	□□□□□ -2.14
DOT6	YER088C	PCL1	P24867	279 aa		1.71	□□□□□ -2.14
DOT6	YER088C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	1.71	□□□□□ -2.14	not detected
DOT6	YER088C	DRE2	P36152	348 aa		1.71	□□□□□ -2.14
DOT6	YER088C	ATP3	P38077	311 aa	Known RBP	1.71	□□□□□ -2.14
DOT6	YER088C	DED81	P38707	554 aa	Known RBP	1.71	□□□□□ -2.14
DOT6	YER088C	EGT2	P42835	1041 aa		1.71	□□□□□ -2.14
DOT6	YER088C	ROG1	P53118	685 aa		1.71	□□□□□ -2.14
DOT6	YER088C	YMR102C	Q03177	834 aa		1.71	□□□□□ -2.14
DOT6	YER088C	CMS1	Q07897	291 aa	Known RBP	1.71	□□□□□ -2.14
DOT6	YER088C	SMF3	Q12078	473 aa	Predicted RBP	1.71	□□□□□ -2.14
DOT6	YER088C	CEX1	Q12453	761 aa		1.71	□□□□□ -2.14
DOT6	YER088C	OPI3	P05375	206 aa		1.71	□□□□□ -2.14
DOT6	YER088C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	1.71	□□□□□ -2.14	not detected
DOT6	YER088C	OPI1	P21957	404 aa		1.71	□□□□□ -2.14
DOT6	YER088C	PHO91	P27514	894 aa		1.71	□□□□□ -2.14
DOT6	YER088C	SKT5	P34226	696 aa		1.71	□□□□□ -2.14
DOT6	YER088C	UTH1	P36135	365 aa		1.71	□□□□□ -2.14
DOT6	YER088C	RTC2	P38279	296 aa		1.71	□□□□□ -2.14
DOT6	YER088C	YHL026C	P38740	315 aa		1.71	□□□□□ -2.14
DOT6	YER088C	LCB2	P40970	561 aa		1.71	□□□□□ -2.14
DOT6	YER088C	KEG1	P43614	200 aa		1.71	□□□□□ -2.14
DOT6	YER088C	AIM24	P47127	394 aa		1.71	□□□□□ -2.14
DOT6	YER088C	VPS9	P54787	451 aa		1.71	□□□□□ -2.14
DOT6	YER088C	HAL1	Q01766	294 aa		1.71	□□□□□ -2.14
DOT6	YER088C	MYO5	Q04439	1219 aa	Known RBP	1.71	□□□□□ -2.14
DOT6	YER088C	PRP8	P33334	2413 aa	Known RBP	1.7	□□□□□ -2.14

Retrieved 100 of 5,963 RNA–protein pairs in 78.4 ms