RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W PCL1P24867 279 aa2.27□□□□□ -2.05
SSF2YDR312W DPH5P32469 300 aaPredicted RBP2.27□□□□□ -2.05
SSF2YDR312W UTH1P36135 365 aa2.27□□□□□ -2.05
SSF2YDR312W INM1P38710 295 aa2.27□□□□□ -2.05
SSF2YDR312W COX14P39103 70 aa2.27□□□□□ -2.05
SSF2YDR312W AIM10P39965 576 aaKnown RBP2.27□□□□□ -2.05
SSF2YDR312W UTP18P40362 594 aaPredicted RBP2.27□□□□□ -2.05
SSF2YDR312W PIB2P53191 635 aa2.27□□□□□ -2.05
SSF2YDR312W ADA2Q02336 434 aa2.27□□□□□ -2.05
SSF2YDR312W CUE5Q08412 411 aaKnown RBP2.27□□□□□ -2.05
SSF2YDR312W PLP2Q12017 286 aa2.27□□□□□ -2.05
SSF2YDR312W PAR32Q12515 295 aaKnown RBP2.27□□□□□ -2.05
SSF2YDR312W CDC21P06785 304 aa2.26□□□□□ -2.05
SSF2YDR312W RPL1AP0CX43 217 aaKnown RBP2.26□□□□□ -2.05
SSF2YDR312W RPL1BP0CX44 217 aaKnown RBP2.26□□□□□ -2.05
SSF2YDR312W ALG1P16661 449 aa2.26□□□□□ -2.05
SSF2YDR312W NUP2P32499 720 aa2.26□□□□□ -2.05
SSF2YDR312W SWI3P32591 825 aa2.26□□□□□ -2.05
SSF2YDR312W SKN1P33336 771 aa2.26□□□□□ -2.05
SSF2YDR312W DBP7P36120 742 aaKnown RBP2.26□□□□□ -2.05
SSF2YDR312W DAD2P36162 133 aa2.26□□□□□ -2.05
SSF2YDR312W MIG3P39943 394 aa2.26□□□□□ -2.05
SSF2YDR312W PAC11P40960 533 aa2.26□□□□□ -2.05
SSF2YDR312W LCB2P40970 561 aa2.26□□□□□ -2.05
SSF2YDR312W GAB1P41733 394 aa2.26□□□□□ -2.05
SSF2YDR312W LCB3P47013 409 aa2.26□□□□□ -2.05
SSF2YDR312W ASN2P49090 572 aaKnown RBP2.26□□□□□ -2.05
SSF2YDR312W RRP46P53256 223 aaPredicted RBP2.26□□□□□ -2.05
SSF2YDR312W HAL1Q01766 294 aa2.26□□□□□ -2.05
SSF2YDR312W TSA2Q04120 196 aa2.26□□□□□ -2.05
SSF2YDR312W RIF2Q06208 395 aa2.26□□□□□ -2.05
SSF2YDR312W YFH1Q07540 174 aa2.26□□□□□ -2.05
SSF2YDR312W YGK3Q12222 375 aaPredicted RBP2.26□□□□□ -2.05
SSF2YDR312W ERP3Q12403 225 aa2.26□□□□□ -2.05
SSF2YDR312W SSC1P0CS90 654 aaKnown RBP2.25□□□□□ -2.05
SSF2YDR312W MAS2P11914 482 aa2.25□□□□□ -2.05
SSF2YDR312W MSI1P13712 422 aa2.25□□□□□ -2.05
SSF2YDR312W SNA3P14359 133 aa2.25□□□□□ -2.05
SSF2YDR312W YHK8P38776 514 aa2.25□□□□□ -2.05
SSF2YDR312W APE4P38821 490 aa2.25□□□□□ -2.05
SSF2YDR312W MMF1P40185 145 aaKnown RBP2.25□□□□□ -2.05
SSF2YDR312W TOS2P50078 622 aa2.25□□□□□ -2.05
SSF2YDR312W ALF1P53904 254 aa2.25□□□□□ -2.05
SSF2YDR312W TDA1Q03533 586 aa2.25□□□□□ -2.05
SSF2YDR312W YMR321CQ04898 105 aa2.25□□□□□ -2.05
SSF2YDR312W AAD15Q08361 143 aa2.25□□□□□ -2.05
SSF2YDR312W RNH203Q12338 110 aa2.25□□□□□ -2.05
SSF2YDR312W GCN1P33892 2672 aaKnown RBP2.25□□□□□ -2.05
SSF2YDR312W IRA2P19158 3079 aa2.25□□□□□ -2.05
SSF2YDR312W OPI3P05375 206 aa2.24□□□□□ -2.05
SSF2YDR312W ATP1P07251 545 aaKnown RBP2.24□□□□□ -2.05
SSF2YDR312W SKT5P34226 696 aa2.24□□□□□ -2.05
SSF2YDR312W SPT10P35208 640 aa2.24□□□□□ -2.05
SSF2YDR312W QDR3P38227 689 aa2.24□□□□□ -2.05
SSF2YDR312W RXT2P38255 430 aa2.24□□□□□ -2.05
SSF2YDR312W RTC2P38279 296 aa2.24□□□□□ -2.05
SSF2YDR312W WSS1P38838 269 aa2.24□□□□□ -2.05
SSF2YDR312W EGT2P42835 1041 aa2.24□□□□□ -2.05
SSF2YDR312W YFR057WP43625 151 aa2.24□□□□□ -2.05
SSF2YDR312W AIM24P47127 394 aa2.24□□□□□ -2.05
SSF2YDR312W BIR1P47134 954 aa2.24□□□□□ -2.05
SSF2YDR312W BNS1P50084 137 aa2.24□□□□□ -2.05
SSF2YDR312W ROG1P53118 685 aa2.24□□□□□ -2.05
SSF2YDR312W RTN1Q04947 295 aaKnown RBP2.24□□□□□ -2.05
SSF2YDR312W LOT6Q07923 191 aa2.24□□□□□ -2.05
SSF2YDR312W SMF3Q12078 473 aaPredicted RBP2.24□□□□□ -2.05
SSF2YDR312W JID1Q12350 301 aa2.24□□□□□ -2.05
SSF2YDR312W NBL1Q3E7Y6 73 aa2.24□□□□□ -2.05
SSF2YDR312W PAB1P04147 577 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05 RIP-Chip
SSF2YDR312W ARF1P11076 181 aaKnown RBP2.23□□□□□ -2.05
SSF2YDR312W RPB5P20434 215 aa2.23□□□□□ -2.05
SSF2YDR312W PHO91P27514 894 aa2.23□□□□□ -2.05
SSF2YDR312W YEF1P32622 495 aa2.23□□□□□ -2.05
SSF2YDR312W NRP1P32770 719 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
SSF2YDR312W COX13P32799 129 aa2.23□□□□□ -2.05
SSF2YDR312W KAP104P38217 918 aaKnown RBP2.23□□□□□ -2.05
SSF2YDR312W SLX1P38324 304 aa2.23□□□□□ -2.05
SSF2YDR312W BAT1P38891 393 aaKnown RBP2.23□□□□□ -2.05
SSF2YDR312W MLH1P38920 769 aa2.23□□□□□ -2.05
SSF2YDR312W MOB1P40484 314 aa2.23□□□□□ -2.05
SSF2YDR312W EFM4P40516 257 aa2.23□□□□□ -2.05
SSF2YDR312W HAC1P41546 238 aa2.23□□□□□ -2.05
SSF2YDR312W STE24P47154 453 aa2.23□□□□□ -2.05
SSF2YDR312W PMT5P52867 743 aa2.23□□□□□ -2.05
SSF2YDR312W MST27P53176 234 aa2.23□□□□□ -2.05
SSF2YDR312W CRH1P53301 507 aa2.23□□□□□ -2.05
SSF2YDR312W RTT102P53330 157 aa2.23□□□□□ -2.05
SSF2YDR312W SPR6Q01684 191 aa2.23□□□□□ -2.05
SSF2YDR312W YMR102CQ03177 834 aa2.23□□□□□ -2.05
SSF2YDR312W ECM7Q06200 448 aa2.23□□□□□ -2.05
SSF2YDR312W IPK1Q06667 281 aa2.23□□□□□ -2.05
SSF2YDR312W SMC5Q08204 1093 aa2.23□□□□□ -2.05
SSF2YDR312W YDR061WQ12298 539 aa2.23□□□□□ -2.05
SSF2YDR312W EAF3Q12432 401 aa2.23□□□□□ -2.05
SSF2YDR312W TFB5Q3E7C1 72 aaPredicted RBP2.23□□□□□ -2.05
SSF2YDR312W HSP26P15992 214 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
SSF2YDR312W YSC83P32792 385 aa2.23□□□□□ -2.05
SSF2YDR312W DOA1P36037 715 aa2.23□□□□□ -2.05
SSF2YDR312W MCR1P36060 302 aaKnown RBP2.23□□□□□ -2.05
SSF2YDR312W PTI1P39927 425 aaPredicted RBP2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 94.6 ms