RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C EFM1P38732 585 aa4.24□□□□□ -1.73
PRP28YDR243C PEX28P38848 579 aa4.24□□□□□ -1.73
PRP28YDR243C SSU1P41930 458 aa4.24□□□□□ -1.73
PRP28YDR243C YAR1P46683 200 aa4.24□□□□□ -1.73
PRP28YDR243C AIM22P47051 409 aa4.24□□□□□ -1.73
PRP28YDR243C HLJ1P48353 224 aa4.24□□□□□ -1.73
PRP28YDR243C RPL9BP51401 191 aaKnown RBP4.24□□□□□ -1.73
PRP28YDR243C GUP1P53154 560 aa4.24□□□□□ -1.73
PRP28YDR243C PKP2P53170 491 aa4.24□□□□□ -1.73
PRP28YDR243C CLD1P53264 445 aa4.24□□□□□ -1.73
PRP28YDR243C YPL071CQ02864 156 aa4.24□□□□□ -1.73
PRP28YDR243C TDA1Q03533 586 aa4.24□□□□□ -1.73
PRP28YDR243C MRI1Q06489 411 aaKnown RBP4.24□□□□□ -1.73
PRP28YDR243C YDR306CQ06640 478 aa4.24□□□□□ -1.73
PRP28YDR243C IZH3Q07959 543 aa4.24□□□□□ -1.73
PRP28YDR243C YPL257WQ08974 193 aa4.24□□□□□ -1.73
PRP28YDR243C YPL066WQ12194 479 aa4.24□□□□□ -1.73
PRP28YDR243C MDY2Q12285 212 aa4.24□□□□□ -1.73
PRP28YDR243C TRM10Q12400 293 aa4.24□□□□□ -1.73
PRP28YDR243C MRX4Q12467 430 aa4.24□□□□□ -1.73
PRP28YDR243C HXK2P04807 486 aaKnown RBP4.23□□□□□ -1.73
PRP28YDR243C CDC7P06243 507 aa4.23□□□□□ -1.73
PRP28YDR243C HVG1P0CE11 249 aa4.23□□□□□ -1.73
PRP28YDR243C YER152CP10356 443 aa4.23□□□□□ -1.73
PRP28YDR243C CKA1P15790 372 aa4.23□□□□□ -1.73
PRP28YDR243C PHO80P20052 293 aa4.23□□□□□ -1.73
PRP28YDR243C MNE1P24720 663 aa4.23□□□□□ -1.73
PRP28YDR243C BOS1P25385 244 aa4.23□□□□□ -1.73
PRP28YDR243C SUA5P32579 426 aa4.23□□□□□ -1.73
PRP28YDR243C UGA4P32837 571 aa4.23□□□□□ -1.73
PRP28YDR243C MDL2P33311 773 aa4.23□□□□□ -1.73
PRP28YDR243C YOX1P34161 385 aa4.23□□□□□ -1.73
PRP28YDR243C MBA1P38300 278 aa4.23□□□□□ -1.73
PRP28YDR243C YBR220CP38318 560 aa4.23□□□□□ -1.73
PRP28YDR243C ERG7P38604 731 aa4.23□□□□□ -1.73
PRP28YDR243C URA8P38627 578 aaPredicted RBP4.23□□□□□ -1.73
PRP28YDR243C CRG1P38892 291 aaRIP-Chip data4.23□□□□□ -1.73not detected
PRP28YDR243C OSW5P40219 148 aa4.23□□□□□ -1.73
PRP28YDR243C AAD10P47182 288 aa4.23□□□□□ -1.73
PRP28YDR243C COG7P53195 279 aa4.23□□□□□ -1.73
PRP28YDR243C BIO4P53630 237 aa4.23□□□□□ -1.73
PRP28YDR243C BUD17P53727 317 aa4.23□□□□□ -1.73
PRP28YDR243C YSA1Q01976 231 aa4.23□□□□□ -1.73
PRP28YDR243C RKM2Q03942 479 aa4.23□□□□□ -1.73
PRP28YDR243C SEN15Q04675 128 aa4.23□□□□□ -1.73
PRP28YDR243C AIM32Q04689 311 aa4.23□□□□□ -1.73
PRP28YDR243C YDR278CQ05612 105 aa4.23□□□□□ -1.73
PRP28YDR243C MSC3Q05812 728 aa4.23□□□□□ -1.73
PRP28YDR243C YLR179CQ06252 201 aaKnown RBP4.23□□□□□ -1.73
PRP28YDR243C YPR078CQ06813 372 aa4.23□□□□□ -1.73
PRP28YDR243C SSK1Q07084 712 aa4.23□□□□□ -1.73
PRP28YDR243C GAS5Q08193 484 aa4.23□□□□□ -1.73
PRP28YDR243C NMD4Q12129 218 aa4.23□□□□□ -1.73
PRP28YDR243C SUL2Q12325 893 aa4.23□□□□□ -1.73
PRP28YDR243C RAD52P06778 471 aaKnown RBP4.22□□□□□ -1.73
PRP28YDR243C ERG20P08524 352 aaKnown RBP4.22□□□□□ -1.73
PRP28YDR243C SAM1P10659 382 aaKnown RBP4.22□□□□□ -1.73
PRP28YDR243C SEC12P11655 471 aa4.22□□□□□ -1.73
PRP28YDR243C UNG1P12887 359 aa4.22□□□□□ -1.73
PRP28YDR243C ERD2P18414 219 aa4.22□□□□□ -1.73
PRP28YDR243C GEX1P25596 615 aa4.22□□□□□ -1.73
PRP28YDR243C SPS19P32573 292 aaKnown RBP4.22□□□□□ -1.73
PRP28YDR243C MUD1P32605 298 aaKnown RBP4.22□□□□□ -1.73
PRP28YDR243C APE3P37302 537 aaKnown RBP4.22□□□□□ -1.73
PRP28YDR243C NTC20P38302 140 aaPredicted RBP4.22□□□□□ -1.73
PRP28YDR243C AME1P38313 324 aa4.22□□□□□ -1.73
PRP28YDR243C YPT31P38555 223 aaKnown RBP4.22□□□□□ -1.73
PRP28YDR243C FSH1P38777 243 aaKnown RBP4.22□□□□□ -1.73
PRP28YDR243C IPT1P38954 527 aa4.22□□□□□ -1.73
PRP28YDR243C AFG3P39925 761 aa4.22□□□□□ -1.73
PRP28YDR243C GLC8P41818 229 aa4.22□□□□□ -1.73
PRP28YDR243C YNR066CP53752 436 aa4.22□□□□□ -1.73
PRP28YDR243C CDC55Q00362 526 aa4.22□□□□□ -1.73
PRP28YDR243C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
PRP28YDR243C MRP51Q02950 344 aa4.22□□□□□ -1.73
PRP28YDR243C YAP6Q03935 383 aa4.22□□□□□ -1.73
PRP28YDR243C SHH3Q04487 196 aa4.22□□□□□ -1.73
PRP28YDR243C YDR124WQ04608 324 aa4.22□□□□□ -1.73
PRP28YDR243C ASR1Q06834 288 aa4.22□□□□□ -1.73
PRP28YDR243C PEX27Q08580 376 aa4.22□□□□□ -1.73
PRP28YDR243C FDH1Q08911 376 aa4.22□□□□□ -1.73
PRP28YDR243C LEA1Q08963 238 aaPredicted RBP4.22□□□□□ -1.73
PRP28YDR243C SRO7Q12038 1033 aa4.22□□□□□ -1.73
PRP28YDR243C GPM3Q12326 303 aa4.22□□□□□ -1.73
PRP28YDR243C MEX67Q99257 599 aaKnown RBP4.22□□□□□ -1.73
PRP28YDR243C PET20Q99373 253 aa4.22□□□□□ -1.73
PRP28YDR243C CBP1P07252 654 aa4.22□□□□□ -1.73
PRP28YDR243C PDX1P16451 410 aa4.22□□□□□ -1.73
PRP28YDR243C KAR4P25583 335 aa4.22□□□□□ -1.73
PRP28YDR243C MAC1P35192 417 aa4.22□□□□□ -1.73
PRP28YDR243C YKR075CP36155 307 aa4.22□□□□□ -1.73
PRP28YDR243C YBR241CP38142 488 aa4.22□□□□□ -1.73
PRP28YDR243C UBP5P39944 805 aa4.22□□□□□ -1.73
PRP28YDR243C SLZ1P40167 298 aa4.22□□□□□ -1.73
PRP28YDR243C YMR144WP40214 342 aaKnown RBP4.22□□□□□ -1.73
PRP28YDR243C PAN6P40459 309 aa4.22□□□□□ -1.73
PRP28YDR243C GAT1P43574 510 aa4.22□□□□□ -1.73
PRP28YDR243C FAR3P46671 204 aa4.22□□□□□ -1.73
PRP28YDR243C YJR124CP47159 448 aa4.22□□□□□ -1.73
PRP28YDR243C MNN10P50108 393 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms