RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W IMA2Q08295 589 aa1.95□□□□□ -2.1
SIR4YDR227W YOR387CQ08910 206 aa1.95□□□□□ -2.1
SIR4YDR227W NDJ1Q12366 352 aa1.95□□□□□ -2.1
SIR4YDR227W SNF8Q12483 233 aa1.95□□□□□ -2.1
SIR4YDR227W YER175W-AQ8TGU4 54 aa1.95□□□□□ -2.1
SIR4YDR227W BRR1Q99177 341 aaPredicted RBP1.95□□□□□ -2.1
SIR4YDR227W SEN1Q00416 2231 aaKnown RBP1.95□□□□□ -2.1
SIR4YDR227W SUC2P00724 532 aa1.95□□□□□ -2.1
SIR4YDR227W LEU4P06208 619 aaKnown RBP1.95□□□□□ -2.1
SIR4YDR227W SIN4P32259 974 aa1.95□□□□□ -2.1
SIR4YDR227W IES6P32617 166 aa1.95□□□□□ -2.1
SIR4YDR227W YSC83P32792 385 aa1.95□□□□□ -2.1
SIR4YDR227W YKL097CP34245 136 aa1.95□□□□□ -2.1
SIR4YDR227W KES1P35844 434 aaKnown RBP1.95□□□□□ -2.1
SIR4YDR227W CDS1P38221 457 aa1.95□□□□□ -2.1
SIR4YDR227W RIB4P50861 169 aaPredicted RBP1.95□□□□□ -2.1
SIR4YDR227W SKO1Q02100 647 aa1.95□□□□□ -2.1
SIR4YDR227W MTG1Q03151 367 aaPredicted RBP1.95□□□□□ -2.1
SIR4YDR227W RCR2Q03446 210 aaKnown RBP1.95□□□□□ -2.1
SIR4YDR227W PEX12Q04370 399 aa1.95□□□□□ -2.1
SIR4YDR227W PLM2Q04383 521 aa1.95□□□□□ -2.1
SIR4YDR227W BCH1Q05029 724 aa1.95□□□□□ -2.1
SIR4YDR227W REX4Q08237 289 aa1.95□□□□□ -2.1
SIR4YDR227W YPL216WQ08964 1102 aa1.95□□□□□ -2.1
SIR4YDR227W LAG2Q92325 660 aa1.95□□□□□ -2.1
SIR4YDR227W VCX1Q99385 411 aa1.95□□□□□ -2.1
SIR4YDR227W ERS1P17261 260 aa1.94□□□□□ -2.1
SIR4YDR227W AIM17P23180 465 aaKnown RBP1.94□□□□□ -2.1
SIR4YDR227W YPT7P32939 208 aa1.94□□□□□ -2.1
SIR4YDR227W CBR1P38626 284 aaKnown RBP1.94□□□□□ -2.1
SIR4YDR227W YKE4P40544 346 aa1.94□□□□□ -2.1
SIR4YDR227W NAS2P40555 220 aa1.94□□□□□ -2.1
SIR4YDR227W YFR020WP43600 232 aa1.94□□□□□ -2.1
SIR4YDR227W YJL016WP47072 561 aa1.94□□□□□ -2.1
SIR4YDR227W YIP4P53093 235 aa1.94□□□□□ -2.1
SIR4YDR227W RSM23Q01163 450 aa1.94□□□□□ -2.1
SIR4YDR227W ACL4Q03771 387 aa1.94□□□□□ -2.1
SIR4YDR227W TEN1Q07921 160 aa1.94□□□□□ -2.1
SIR4YDR227W YOL019WQ08157 551 aa1.94□□□□□ -2.1
SIR4YDR227W SPE4Q12455 300 aa1.94□□□□□ -2.1
SIR4YDR227W YBL111CQ3E7Y5 667 aa1.94□□□□□ -2.1
SIR4YDR227W YBR182C-AQ8TGU6 64 aa1.94□□□□□ -2.1
SIR4YDR227W FSH3Q99369 266 aa1.94□□□□□ -2.1
SIR4YDR227W CDC8P00572 216 aa1.94□□□□□ -2.1
SIR4YDR227W RAD1P06777 1100 aa1.94□□□□□ -2.1
SIR4YDR227W PPH21P23594 369 aa1.94□□□□□ -2.1
SIR4YDR227W PUT3P25502 979 aaPredicted RBP1.94□□□□□ -2.1
SIR4YDR227W SPS18P32572 300 aa1.94□□□□□ -2.1
SIR4YDR227W ELF1P36053 145 aa1.94□□□□□ -2.1
SIR4YDR227W RFT1P38206 574 aaPredicted RBP1.94□□□□□ -2.1
SIR4YDR227W FIG1P38224 298 aa1.94□□□□□ -2.1
SIR4YDR227W ZTA1P38230 334 aaKnown RBP1.94□□□□□ -2.1
SIR4YDR227W GDT1P38301 280 aaPredicted RBP1.94□□□□□ -2.1
SIR4YDR227W TDP1P38319 544 aa1.94□□□□□ -2.1
SIR4YDR227W ARC1P46672 376 aaKnown RBP1.94□□□□□ -2.1
SIR4YDR227W MRX5P47007 382 aa1.94□□□□□ -2.1
SIR4YDR227W AIM33Q04516 312 aa1.94□□□□□ -2.1
SIR4YDR227W RSA3Q05942 220 aaKnown RBP1.94□□□□□ -2.1
SIR4YDR227W RFU1Q08003 200 aa1.94□□□□□ -2.1
SIR4YDR227W SEC16P48415 2195 aaKnown RBP1.94□□□□□ -2.1
SIR4YDR227W YLR415CO13578 112 aa1.94□□□□□ -2.1
SIR4YDR227W HIS1P00498 297 aaKnown RBP1.94□□□□□ -2.1
SIR4YDR227W CHS2P14180 963 aa1.94□□□□□ -2.1
SIR4YDR227W DUG2P38149 878 aa1.94□□□□□ -2.1
SIR4YDR227W YER188WP40103 239 aa1.94□□□□□ -2.1
SIR4YDR227W PEF1P53238 335 aa1.94□□□□□ -2.1
SIR4YDR227W PRP38Q00723 242 aaPredicted RBP1.94□□□□□ -2.1
SIR4YDR227W TRS31Q03337 283 aa1.94□□□□□ -2.1
SIR4YDR227W ATG17Q06410 417 aa1.94□□□□□ -2.1
SIR4YDR227W SOR2Q07786 357 aa1.94□□□□□ -2.1
SIR4YDR227W GEP3Q08622 556 aa1.94□□□□□ -2.1
SIR4YDR227W YLR049CQ12110 428 aa1.94□□□□□ -2.1
SIR4YDR227W ICT1Q12385 394 aa1.94□□□□□ -2.1
SIR4YDR227W YKL033W-AQ86ZR7 236 aa1.94□□□□□ -2.1
SIR4YDR227W COX5AP00424 153 aa1.93□□□□□ -2.1
SIR4YDR227W RNR2P09938 399 aaKnown RBP1.93□□□□□ -2.1
SIR4YDR227W ZRC1P20107 442 aa1.93□□□□□ -2.1
SIR4YDR227W RPO26P20435 155 aa1.93□□□□□ -2.1
SIR4YDR227W IME1P21190 360 aa1.93□□□□□ -2.1
SIR4YDR227W SEC22P22214 214 aa1.93□□□□□ -2.1
SIR4YDR227W ITR2P30606 609 aa1.93□□□□□ -2.1
SIR4YDR227W SEC1P30619 724 aaKnown RBP1.93□□□□□ -2.1
SIR4YDR227W CYS4P32582 507 aaKnown RBP1.93□□□□□ -2.1
SIR4YDR227W TFA2P36145 328 aa1.93□□□□□ -2.1
SIR4YDR227W PRS3P38689 320 aaKnown RBP1.93□□□□□ -2.1
SIR4YDR227W BZZ1P38822 633 aa1.93□□□□□ -2.1
SIR4YDR227W YTP1P53584 459 aa1.93□□□□□ -2.1
SIR4YDR227W YMR253CQ04835 414 aa1.93□□□□□ -2.1
SIR4YDR227W YMR226CQ05016 267 aaKnown RBP1.93□□□□□ -2.1
SIR4YDR227W FAR8Q05040 523 aa1.93□□□□□ -2.1
SIR4YDR227W TMA10Q06177 86 aa1.93□□□□□ -2.1
SIR4YDR227W SHS1Q07657 551 aa1.93□□□□□ -2.1
SIR4YDR227W PAM18Q07914 168 aa1.93□□□□□ -2.1
SIR4YDR227W SDO1Q07953 250 aaKnown RBP1.93□□□□□ -2.1
SIR4YDR227W RRS1Q08746 203 aaKnown RBP1.93□□□□□ -2.1
SIR4YDR227W SOG2Q08817 791 aa1.93□□□□□ -2.1
SIR4YDR227W RDR1Q08904 546 aa1.93□□□□□ -2.1
SIR4YDR227W YDL211CQ12121 372 aa1.93□□□□□ -2.1
SIR4YDR227W VAM3Q12241 283 aa1.93□□□□□ -2.1
SIR4YDR227W THP2O13539 261 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms