RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W YBR184WP38299 523 aa1.95□□□□□ -2.1
USO1YDL058W RRT2P38332 387 aa1.95□□□□□ -2.1
USO1YDL058W ARO9P38840 513 aaPredicted RBP1.95□□□□□ -2.1
USO1YDL058W YHR182WP38870 785 aa1.95□□□□□ -2.1
USO1YDL058W VFA1P40080 203 aa1.95□□□□□ -2.1
USO1YDL058W LRO1P40345 661 aa1.95□□□□□ -2.1
USO1YDL058W DPH1P40487 425 aaKnown RBP1.95□□□□□ -2.1
USO1YDL058W LSB6P42951 607 aa1.95□□□□□ -2.1
USO1YDL058W CHA4P43634 648 aa1.95□□□□□ -2.1
USO1YDL058W BUD13P46947 266 aaPredicted RBP1.95□□□□□ -2.1
USO1YDL058W HIT1P46973 164 aa1.95□□□□□ -2.1
USO1YDL058W UBX6P47049 396 aa1.95□□□□□ -2.1
USO1YDL058W OST3P48439 350 aa1.95□□□□□ -2.1
USO1YDL058W UBC12P52491 188 aa1.95□□□□□ -2.1
USO1YDL058W YNL092WP53934 400 aa1.95□□□□□ -2.1
USO1YDL058W ATP19P81451 68 aa1.95□□□□□ -2.1
USO1YDL058W YDR366CP87287 132 aa1.95□□□□□ -2.1
USO1YDL058W DIG2Q03373 323 aaKnown RBP1.95□□□□□ -2.1
USO1YDL058W SMA2Q04658 369 aa1.95□□□□□ -2.1
USO1YDL058W ERP1Q05359 219 aaKnown RBP1.95□□□□□ -2.1
USO1YDL058W GAS2Q06135 555 aa1.95□□□□□ -2.1
USO1YDL058W MRI1Q06489 411 aaKnown RBP1.95□□□□□ -2.1
USO1YDL058W SUE1Q06524 206 aa1.95□□□□□ -2.1
USO1YDL058W ASR1Q06834 288 aa1.95□□□□□ -2.1
USO1YDL058W TY3A-GQ12173 290 aa1.95□□□□□ -2.1
USO1YDL058W YPL245WQ12179 454 aaKnown RBP1.95□□□□□ -2.1
USO1YDL058W SUL2Q12325 893 aa1.95□□□□□ -2.1
USO1YDL058W SET6Q12529 373 aa1.95□□□□□ -2.1
USO1YDL058W COA6Q3E846 104 aa1.95□□□□□ -2.1
USO1YDL058W TY3A-IQ99219 290 aa1.95□□□□□ -2.1
USO1YDL058W UBA3Q99344 299 aa1.95□□□□□ -2.1
USO1YDL058W TOP2P06786 1428 aaKnown RBP1.95□□□□□ -2.1
USO1YDL058W TPK2P06245 380 aa1.95□□□□□ -2.1
USO1YDL058W GCR1P07261 785 aa1.95□□□□□ -2.1
USO1YDL058W IME1P21190 360 aa1.95□□□□□ -2.1
USO1YDL058W MAK31P23059 88 aa1.95□□□□□ -2.1
USO1YDL058W URK1P27515 501 aa1.95□□□□□ -2.1
USO1YDL058W YIM1P28625 365 aa1.95□□□□□ -2.1
USO1YDL058W YBL055CP34220 418 aaPredicted RBP1.95□□□□□ -2.1
USO1YDL058W SHM1P37292 490 aaPredicted RBP1.95□□□□□ -2.1
USO1YDL058W ECM21P38167 1117 aaKnown RBP1.95□□□□□ -2.1
USO1YDL058W IST2P38250 946 aa1.95□□□□□ -2.1
USO1YDL058W AME1P38313 324 aa1.95□□□□□ -2.1
USO1YDL058W NEM1P38757 446 aa1.95□□□□□ -2.1
USO1YDL058W YMR144WP40214 342 aaKnown RBP1.95□□□□□ -2.1
USO1YDL058W ELO3P40319 345 aa1.95□□□□□ -2.1
USO1YDL058W YFR018CP43599 363 aa1.95□□□□□ -2.1
USO1YDL058W UBP8P50102 471 aa1.95□□□□□ -2.1
USO1YDL058W DAD3P69850 94 aa1.95□□□□□ -2.1
USO1YDL058W TDA1Q03533 586 aa1.95□□□□□ -2.1
USO1YDL058W SNU56Q03782 492 aaKnown RBP1.95□□□□□ -2.1
USO1YDL058W DAL4Q04895 635 aa1.95□□□□□ -2.1
USO1YDL058W AGC1Q12482 902 aa1.95□□□□□ -2.1
USO1YDL058W MHT1Q12525 324 aa1.95□□□□□ -2.1
USO1YDL058W CSR2Q12734 1121 aa1.95□□□□□ -2.1
USO1YDL058W SUS1Q6WNK7 96 aa1.95□□□□□ -2.1
USO1YDL058W SPO12P17123 173 aa1.95□□□□□ -2.1
USO1YDL058W GRX2P17695 143 aaKnown RBP1.95□□□□□ -2.1
USO1YDL058W YCR100CP25606 316 aa1.95□□□□□ -2.1
USO1YDL058W ARO7P32178 256 aa1.95□□□□□ -2.1
USO1YDL058W MRP20P32387 263 aa1.95□□□□□ -2.1
USO1YDL058W YEF1P32622 495 aa1.95□□□□□ -2.1
USO1YDL058W YSC84P32793 468 aa1.95□□□□□ -2.1
USO1YDL058W YPT53P36019 220 aa1.95□□□□□ -2.1
USO1YDL058W SPC34P36131 295 aa1.95□□□□□ -2.1
USO1YDL058W BNA4P38169 460 aa1.95□□□□□ -2.1
USO1YDL058W SDH8P38345 138 aa1.95□□□□□ -2.1
USO1YDL058W TPS3P38426 1054 aaKnown RBP1.95□□□□□ -2.1
USO1YDL058W RPS26AP39938 119 aaKnown RBP1.95□□□□□ -2.1
USO1YDL058W RPS26BP39939 119 aaKnown RBP1.95□□□□□ -2.1
USO1YDL058W SAH1P39954 449 aaKnown RBP1.95□□□□□ -2.1
USO1YDL058W LSM4P40070 187 aaKnown RBP1.95□□□□□ -2.1
USO1YDL058W SYG1P40528 902 aa1.95□□□□□ -2.1
USO1YDL058W SFH5P47008 294 aa1.95□□□□□ -2.1
USO1YDL058W VPS25P47142 202 aa1.95□□□□□ -2.1
USO1YDL058W LCL3P53153 274 aa1.95□□□□□ -2.1
USO1YDL058W YPL071CQ02864 156 aa1.95□□□□□ -2.1
USO1YDL058W HEL2Q05580 639 aaKnown RBP1.95□□□□□ -2.1
USO1YDL058W SEI1Q06058 285 aa1.95□□□□□ -2.1
USO1YDL058W YPR127WQ06494 345 aa1.95□□□□□ -2.1
USO1YDL058W DIB1Q06819 143 aaPredicted RBP1.95□□□□□ -2.1
USO1YDL058W NRT1Q08485 598 aa1.95□□□□□ -2.1
USO1YDL058W YLL056CQ12177 298 aa1.95□□□□□ -2.1
USO1YDL058W RRD2Q12461 358 aa1.95□□□□□ -2.1
USO1YDL058W PDR12Q02785 1511 aa1.95□□□□□ -2.1
USO1YDL058W VPS15P22219 1454 aa1.95□□□□□ -2.1
USO1YDL058W BI2P03873 423 aa1.95□□□□□ -2.1
USO1YDL058W CCA1P21269 546 aa1.95□□□□□ -2.1
USO1YDL058W AEP1P32493 518 aa1.95□□□□□ -2.1
USO1YDL058W PDC2P32896 925 aa1.95□□□□□ -2.1
USO1YDL058W MSN4P33749 630 aa1.95□□□□□ -2.1
USO1YDL058W WBP1P33767 430 aaKnown RBP1.95□□□□□ -2.1
USO1YDL058W UTP11P34247 250 aaPredicted RBP1.95□□□□□ -2.1
USO1YDL058W TAF14P35189 244 aa1.95□□□□□ -2.1
USO1YDL058W YRA2P36036 203 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
USO1YDL058W NVJ1P38881 321 aa1.95□□□□□ -2.1
USO1YDL058W CHL4P38907 458 aa1.95□□□□□ -2.1
USO1YDL058W PUG1P40100 303 aa1.95□□□□□ -2.1
USO1YDL058W PAN6P40459 309 aa1.95□□□□□ -2.1
USO1YDL058W ZIM17P42844 174 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms