RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	YLR413W	Q06689	675 aa		4.03	□□□□□ -1.76
SAF1	YBR280C	DCI1	Q08558	271 aa		4.03	□□□□□ -1.76
SAF1	YBR280C	YOR214C	Q12282	236 aa		4.03	□□□□□ -1.76
SAF1	YBR280C	YAL064W-B	O13512	126 aa		4.02	□□□□□ -1.77
SAF1	YBR280C	HTA1	P04911	132 aa	Known RBP	4.02	□□□□□ -1.77
SAF1	YBR280C	RAP1	P11938	827 aa		4.02	□□□□□ -1.77
SAF1	YBR280C	SPC29	P33419	253 aa		4.02	□□□□□ -1.77
SAF1	YBR280C	RGI1	P40043	161 aa	Predicted RBP	4.02	□□□□□ -1.77
SAF1	YBR280C	PRE6	P40303	254 aa	Known RBP	4.02	□□□□□ -1.77
SAF1	YBR280C	ADO1	P47143	340 aa	Known RBP	4.02	□□□□□ -1.77
SAF1	YBR280C	MRK1	P50873	501 aa		4.02	□□□□□ -1.77
SAF1	YBR280C	MRM2	P53123	320 aa		4.02	□□□□□ -1.77
SAF1	YBR280C	NAN1	Q02931	896 aa	Known RBP	4.02	□□□□□ -1.77
SAF1	YBR280C	YLR040C	Q07988	224 aa		4.02	□□□□□ -1.77
SAF1	YBR280C	GRE1	Q08969	168 aa		4.02	□□□□□ -1.77
SAF1	YBR280C	MCP1	Q12106	302 aa		4.02	□□□□□ -1.77
SAF1	YBR280C	PUT2	P07275	575 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	MER1	P16523	270 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	RAD14	P28519	371 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	MRPL17	P36528	281 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	TSL1	P38427	1098 aa	Known RBP	4.01	□□□□□ -1.77
SAF1	YBR280C	SOL3	P38858	249 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	MOB2	P43563	287 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	TOS2	P50078	622 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	YGR126W	P53274	230 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	MNT4	P53745	580 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	ELA1	P53861	379 aa	Predicted RBP	4.01	□□□□□ -1.77
SAF1	YBR280C	KAP120	Q02932	1032 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	YML119W	Q03208	357 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	RNH1	Q04740	348 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	ARV1	Q06541	321 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	RSC58	Q07979	502 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	YDL109C	Q12103	647 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	NOT5	Q12514	560 aa	Predicted RBP	4.01	□□□□□ -1.77
SAF1	YBR280C	SET6	Q12529	373 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	URA2	P07259	2214 aa	Known RBP	4.01	□□□□□ -1.77
SAF1	YBR280C	PHO81	P17442	1178 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	CLB3	P24870	427 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	ITR2	P30606	609 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	YHL044W	P38727	235 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	COG3	P40094	801 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	ACS2	P52910	683 aa	Known RBP	4.01	□□□□□ -1.77
SAF1	YBR280C	IMA1	P53051	589 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	MRPL19	P53875	158 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	VBA4	Q04602	768 aa	Known RBP	4.01	□□□□□ -1.77
SAF1	YBR280C	MED2	Q12124	431 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	NCA2	Q12374	616 aa		4.01	□□□□□ -1.77
SAF1	YBR280C	MOD5	P07884	428 aa		4	□□□□□ -1.77
SAF1	YBR280C	ERD2	P18414	219 aa		4	□□□□□ -1.77
SAF1	YBR280C	PHO91	P27514	894 aa		4	□□□□□ -1.77
SAF1	YBR280C	RPC19	P28000	142 aa	Known RBP	4	□□□□□ -1.77
SAF1	YBR280C	LHP1	P33399	275 aa	Known RBP	4	□□□□□ -1.77
SAF1	YBR280C	SOF1	P33750	489 aa	Known RBP	4	□□□□□ -1.77
SAF1	YBR280C	COS9	P36034	407 aa		4	□□□□□ -1.77
SAF1	YBR280C	CHK1	P38147	527 aa		4	□□□□□ -1.77
SAF1	YBR280C	TSC10	P38342	320 aa		4	□□□□□ -1.77
SAF1	YBR280C	BUD9	P53226	547 aa		4	□□□□□ -1.77
SAF1	YBR280C	MRP51	Q02950	344 aa		4	□□□□□ -1.77
SAF1	YBR280C	RSM28	Q03430	361 aa		4	□□□□□ -1.77
SAF1	YBR280C	BRX1	Q08235	291 aa	Known RBP	4	□□□□□ -1.77
SAF1	YBR280C	AVO1	Q08236	1176 aa		4	□□□□□ -1.77
SAF1	YBR280C	MHF1	Q3E835	90 aa		4	□□□□□ -1.77
SAF1	YBR280C	CDC4	P07834	779 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	RPL35A	P0CX84	120 aa	Known RBP	3.99	□□□□□ -1.77
SAF1	YBR280C	RPL35B	P0CX85	120 aa	Known RBP	3.99	□□□□□ -1.77
SAF1	YBR280C	CCA1	P21269	546 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	RPS1B	P23248	255 aa	Known RBP	3.99	□□□□□ -1.77
SAF1	YBR280C	YCR051W	P25631	222 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	SWH1	P35845	1188 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	MAE1	P36013	669 aa	Known RBP	3.99	□□□□□ -1.77
SAF1	YBR280C	BIG1	P38813	335 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	HXT9	P40885	567 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	SLS1	P42900	643 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	MTQ1	P53944	314 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	HXT11	P54862	567 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	SSQ1	Q05931	657 aa	Predicted RBP	3.99	□□□□□ -1.77
SAF1	YBR280C	IRC19	Q07843	230 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	MF(ALPHA)1	P01149	165 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	ARG3	P05150	338 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	DBP3	P20447	523 aa	Known RBP	3.99	□□□□□ -1.77
SAF1	YBR280C	CLB2	P24869	491 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	RPB9	P27999	122 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	HIR2	P32480	875 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	RCK1	P38622	512 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	ECM14	P38836	430 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	YNL195C	P40168	261 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	TWF1	P53250	332 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	SNF12	P53628	566 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	SKO1	Q02100	647 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	LGE1	Q02796	332 aa	Known RBP	3.99	□□□□□ -1.77
SAF1	YBR280C	RSC9	Q03124	581 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	RCE1	Q03530	315 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	FMN1	Q03778	218 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	YAP6	Q03935	383 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	KRE28	Q04431	385 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	NOP12	Q08208	459 aa	Known RBP	3.99	□□□□□ -1.77
SAF1	YBR280C	BTS1	Q12051	335 aa		3.99	□□□□□ -1.77
SAF1	YBR280C	RPL15A	P05748	204 aa	Known RBP	3.98	□□□□□ -1.77
SAF1	YBR280C	DAL80	P26343	269 aa		3.98	□□□□□ -1.77
SAF1	YBR280C	HIS7	P33734	552 aa	Known RBP	3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms