RNA–Protein interactions for RNA: ENST00000539744.5

LMNTD1-207, Transcript of lamin tail domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LMNTD1, Length 1,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-207ENST00000539744 TM4SF4P48230 202 aa6.34□□□□□ -1.39
LMNTD1-207ENST00000539744 MMP14P50281 582 aa6.34□□□□□ -1.39
LMNTD1-207ENST00000539744 TCP10Q12799 353 aa6.34□□□□□ -1.39
LMNTD1-207ENST00000539744 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.34□□□□□ -1.39
LMNTD1-207ENST00000539744 KRBA2Q6ZNG9 492 aa6.34□□□□□ -1.39
LMNTD1-207ENST00000539744 ZFPM1Q8IX07 1006 aa6.34□□□□□ -1.39
LMNTD1-207ENST00000539744 CHPFQ8IZ52 775 aa6.34□□□□□ -1.39
LMNTD1-207ENST00000539744 TMEM57Q8N5G2 664 aa6.34□□□□□ -1.39
LMNTD1-207ENST00000539744 FAM168AQ92567 244 aa6.34□□□□□ -1.39
LMNTD1-207ENST00000539744 TEKT1Q969V4 418 aa6.34□□□□□ -1.39
LMNTD1-207ENST00000539744 WNK4Q96J92 1243 aa6.34□□□□□ -1.39
LMNTD1-207ENST00000539744 NEUROD6Q96NK8 337 aa6.34□□□□□ -1.39
LMNTD1-207ENST00000539744 SMAD5Q99717 465 aaKnown RBP6.34□□□□□ -1.39
LMNTD1-207ENST00000539744 ZNF576Q9H609 170 aa6.34□□□□□ -1.39
LMNTD1-207ENST00000539744 RC3H2Q9HBD1 1191 aaKnown RBP6.34□□□□□ -1.39
LMNTD1-207ENST00000539744 AKAP2Q9Y2D5 859 aa6.34□□□□□ -1.39
LMNTD1-207ENST00000539744 AKAP11Q9UKA4 1901 aa6.34□□□□□ -1.39
LMNTD1-207ENST00000539744 IGF2BP3O00425 579 aaKnown RBP eCLIP6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 TMPRSS2O15393 492 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 IPO8O15397 1037 aaKnown RBP6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 PRPF3O43395 683 aaKnown RBP6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 NRDCO43847 1150 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 CIAO1O76071 339 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 FARP2O94887 1054 aaPredicted RBP6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 FAM87AP0C7U9 286 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 RLBP1P12271 317 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 MCM4P33991 863 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 LMNB2Q03252 620 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 PPP2R5EQ16537 467 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 CDC42EP5Q6NZY7 148 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 ATF7IPQ6VMQ6 1270 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 NETO1Q8TDF5 533 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 TBC1D22AQ8WUA7 517 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 ARHGAP45Q92619 1136 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 ZKSCAN4Q969J2 545 aaPredicted RBP6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 CRBNQ96SW2 442 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 PTPN18Q99952 460 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 SAGE1Q9NXZ1 904 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 FBXO9Q9UK97 447 aaPredicted RBP6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 COL1A1P02452 1464 aaPredicted RBP6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 A0A1B0GUL7 405 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 GNAI2P04899 355 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 GNAI3P08754 354 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 FAM153BP0C7A2 387 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 LIG1P18858 919 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 TFE3P19532 575 aaPredicted RBP6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 SOX5P35711 763 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 IL15P40933 162 aaPredicted RBP6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 NEK2P51955 445 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 SOX10P56693 466 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 PDE3AQ14432 1141 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 CYP27C1Q4G0S4 372 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 HP1BP3Q5SSJ5 553 aaPredicted RBP6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 WDR78Q5VTH9 848 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 MRM1Q6IN84 353 aaKnown RBP6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 C6orf15Q6UXA7 325 aaPredicted RBP6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 AFAP1L2Q8N4X5 818 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 LRRN4CLQ8ND94 238 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 ATL2Q8NHH9 583 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 WDR66Q8TBY9 1149 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 OPTNQ96CV9 577 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 MISP3Q96FF7 219 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 ZDHHC15Q96MV8 337 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 SENP7Q9BQF6 1050 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 EHD4Q9H223 541 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 USP40Q9NVE5 1235 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 MAP3K20Q9NYL2 800 aaKnown RBP6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 CRIM1Q9NZV1 1036 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 ABCF2Q9UG63 623 aa6.33□□□□□ -1.4
LMNTD1-207ENST00000539744 KIF16BQ96L93 1317 aa6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 SYNGAP1Q96PV0 1343 aa6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 TNRC18O15417 2968 aaPredicted RBP6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 CD53P19397 219 aa6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 ITPKAP23677 461 aa6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 CAP1Q01518 475 aa6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 PABPC4Q13310 644 aaKnown RBP eCLIP6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 VGLL4Q14135 290 aa6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 ZRSR2Q15696 482 aaKnown RBP6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 KIAA0319Q5VV43 1072 aa6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 ZKSCAN2Q63HK3 967 aa6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 BNC2Q6ZN30 1099 aaPredicted RBP6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 CTU1Q7Z7A3 348 aaKnown RBP6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 ZSWIM2Q8NEG5 633 aa6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 SVIPQ8NHG7 77 aa6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 PANK1Q8TE04 598 aa6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 KRTAP4-11Q9BYQ6 195 aa6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 ZFYVE1Q9HBF4 777 aa6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 PPP2R3BQ9Y5P8 575 aa6.32□□□□□ -1.4
LMNTD1-207ENST00000539744 MANSC4A6NHS7 340 aaPredicted RBP6.31□□□□□ -1.4
LMNTD1-207ENST00000539744 LEFTY1O75610 366 aa6.31□□□□□ -1.4
LMNTD1-207ENST00000539744 F13A1P00488 732 aa6.31□□□□□ -1.4
LMNTD1-207ENST00000539744 MESP2Q0VG99 397 aa6.31□□□□□ -1.4
LMNTD1-207ENST00000539744 SREBF2Q12772 1141 aa6.31□□□□□ -1.4
LMNTD1-207ENST00000539744 G3BP1Q13283 466 aaKnown RBP eCLIP6.31□□□□□ -1.4
LMNTD1-207ENST00000539744 MTMR1Q13613 665 aa6.31□□□□□ -1.4
LMNTD1-207ENST00000539744 TNFAIP1Q13829 316 aa6.31□□□□□ -1.4
LMNTD1-207ENST00000539744 TMEM67Q5HYA8 995 aa6.31□□□□□ -1.4
LMNTD1-207ENST00000539744 HHIPL2Q6UWX4 724 aa6.31□□□□□ -1.4
LMNTD1-207ENST00000539744 SV2BQ7L1I2 683 aa6.31□□□□□ -1.4
LMNTD1-207ENST00000539744 STRA8Q7Z7C7 330 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms