RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CTSHP09668 335 aa12.36□□□□□ -0.43
CPSF7-212ENST00000489728 CCT6AP40227 531 aaKnown RBP12.36□□□□□ -0.43
CPSF7-212ENST00000489728 RARRES1P49788 294 aa12.36□□□□□ -0.43
CPSF7-212ENST00000489728 CRYBB1P53674 252 aaPredicted RBP12.36□□□□□ -0.43
CPSF7-212ENST00000489728 IKBKEQ14164 716 aa12.36□□□□□ -0.43
CPSF7-212ENST00000489728 SLC39A14Q15043 492 aa12.36□□□□□ -0.43
CPSF7-212ENST00000489728 PTPAQ15257 358 aa12.36□□□□□ -0.43
CPSF7-212ENST00000489728 IL17AQ16552 155 aa12.36□□□□□ -0.43
CPSF7-212ENST00000489728 XKR9Q5GH70 373 aa12.36□□□□□ -0.43
CPSF7-212ENST00000489728 HABP4Q5JVS0 413 aaKnown RBP12.36□□□□□ -0.43
CPSF7-212ENST00000489728 FBXO47Q5MNV8 452 aa12.36□□□□□ -0.43
CPSF7-212ENST00000489728 C9orf50Q5SZB4 431 aa12.36□□□□□ -0.43
CPSF7-212ENST00000489728 PLA2G4FQ68DD2 849 aa12.36□□□□□ -0.43
CPSF7-212ENST00000489728 DEFB128Q7Z7B8 93 aa12.36□□□□□ -0.43
CPSF7-212ENST00000489728 ZNF410Q86VK4 478 aa12.36□□□□□ -0.43
CPSF7-212ENST00000489728 TCP11Q8WWU5 503 aa12.36□□□□□ -0.43
CPSF7-212ENST00000489728 FTOQ9C0B1 505 aaKnown RBP eCLIP12.36□□□□□ -0.43
CPSF7-212ENST00000489728 BRD1O95696 1058 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 ACRP10323 421 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 CLCN3P51790 818 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 NPEPPSP55786 919 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 SMAD3P84022 425 aaKnown RBP12.35□□□□□ -0.43
CPSF7-212ENST00000489728 LPIN1Q14693 890 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 EMC2Q15006 297 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 GPR153Q6NV75 609 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 POTEGQ6S5H5 508 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 TRMT1LQ7Z2T5 733 aaKnown RBP12.35□□□□□ -0.43
CPSF7-212ENST00000489728 MCPH1Q8NEM0 835 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 PHOSPHO2Q8TCD6 241 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 PSPC1Q8WXF1 523 aaKnown RBP12.35□□□□□ -0.43
CPSF7-212ENST00000489728 ZBTB10Q96DT7 871 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 USP28Q96RU2 1077 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 SLC9A7Q96T83 725 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 FTHL17Q9BXU8 183 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 IFIH1Q9BYX4 1025 aaKnown RBP12.35□□□□□ -0.43
CPSF7-212ENST00000489728 ATP6V0A4Q9HBG4 840 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 AKT3Q9Y243 479 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 ATP6V1DQ9Y5K8 247 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 SRPRBQ9Y5M8 271 aaKnown RBP12.35□□□□□ -0.43
CPSF7-212ENST00000489728 CLIC4Q9Y696 253 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 EVPLQ92817 2033 aa12.35□□□□□ -0.43
CPSF7-212ENST00000489728 TMEM150BA6NC51 233 aa12.34□□□□□ -0.43
CPSF7-212ENST00000489728 ASAP2O43150 1006 aa12.34□□□□□ -0.43
CPSF7-212ENST00000489728 PPP6R2O75170 966 aa12.34□□□□□ -0.43
CPSF7-212ENST00000489728 GPR32O75388 356 aa12.34□□□□□ -0.43
CPSF7-212ENST00000489728 GPC3P51654 580 aa12.34□□□□□ -0.43
CPSF7-212ENST00000489728 MKRN4PQ13434 485 aaPredicted RBP12.34□□□□□ -0.43
CPSF7-212ENST00000489728 MXD4Q14582 209 aaPredicted RBP12.34□□□□□ -0.43
CPSF7-212ENST00000489728 OTOP2Q7RTS6 562 aa12.34□□□□□ -0.43
CPSF7-212ENST00000489728 LRRC71Q8N4P6 559 aa12.34□□□□□ -0.43
CPSF7-212ENST00000489728 SPRYD3Q8NCJ5 442 aa12.34□□□□□ -0.43
CPSF7-212ENST00000489728 MTRQ99707 1265 aa12.34□□□□□ -0.43
CPSF7-212ENST00000489728 MMTAG2Q9BU76 263 aaKnown RBP12.34□□□□□ -0.43
CPSF7-212ENST00000489728 ADAMTS10Q9H324 1103 aa12.34□□□□□ -0.43
CPSF7-212ENST00000489728 SUGCTQ9HAC7 445 aa12.34□□□□□ -0.43
CPSF7-212ENST00000489728 SUCLA2Q9P2R7 463 aaPredicted RBP12.34□□□□□ -0.43
CPSF7-212ENST00000489728 FBXO2Q9UK22 296 aaPredicted RBP12.34□□□□□ -0.43
CPSF7-212ENST00000489728 CFAP45Q9UL16 551 aa12.34□□□□□ -0.43
CPSF7-212ENST00000489728 DNM3Q9UQ16 869 aa12.34□□□□□ -0.43
CPSF7-212ENST00000489728 SLC4A7Q9Y6M7 1214 aa12.34□□□□□ -0.43
CPSF7-212ENST00000489728 TRIOBPQ9H2D6 2365 aa12.34□□□□□ -0.43
CPSF7-212ENST00000489728 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-212ENST00000489728 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-212ENST00000489728 ARHGEF35A5YM69 484 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 GPR182O15218 404 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 EYA4O95677 639 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 VTNP04004 478 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 GHRP10912 638 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 UBA7P41226 1012 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 KCNJ6P48051 423 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 NLRP11P59045 1033 aaKnown RBP12.33□□□□□ -0.44
CPSF7-212ENST00000489728 NUCB2P80303 420 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 POU5F1BQ06416 359 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 PAK2Q13177 524 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 PCBP1Q15365 356 aaKnown RBP eCLIP12.33□□□□□ -0.44
CPSF7-212ENST00000489728 FAM173BQ6P4H8 233 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 KRI1Q8N9T8 703 aaKnown RBP12.33□□□□□ -0.44
CPSF7-212ENST00000489728 LINC00301Q8NCQ3 95 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 DBF4BQ8NFT6 615 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 TET1Q8NFU7 2136 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 KCNG4Q8TDN1 519 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 PIGOQ8TEQ8 1089 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 CALML4Q96GE6 196 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 CDK5RAP3Q96JB5 506 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 TIPINQ9BVW5 301 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 INO80BQ9C086 356 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-212ENST00000489728 CCSER1Q9C0I3 900 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 DDX19AQ9NUU7 478 aaKnown RBP12.33□□□□□ -0.44
CPSF7-212ENST00000489728 RNF216Q9NWF9 866 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-212ENST00000489728 KCND2Q9NZV8 630 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 PCDH10Q9P2E7 1040 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 DAXXQ9UER7 740 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-212ENST00000489728 KIAA1024Q9UPX6 916 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 MICAL3Q7RTP6 2002 aa12.33□□□□□ -0.44
CPSF7-212ENST00000489728 COL4A6Q14031 1691 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 LAMA3Q16787 3333 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 TMEM265A0A087WTH1 108 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 PP2D1A8MPX8 630 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 ZBTB39O15060 712 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 SPTLC2O15270 562 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms