RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 TUBBP07437 444 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 RSPH10BP0C881 870 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 VPS41P49754 854 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 ZNF568Q3ZCX4 644 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 CFAP58Q5T655 872 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 CHST13Q8NET6 341 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 SYTL5Q8TDW5 730 aaPredicted RBP12.85□□□□□ -0.35
SGSM3-209ENST00000478085 GINM1Q9NU53 330 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 GOLGA8SH3BPF8 625 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 DGAT1O75907 488 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 KIAA0754O94854 1291 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 IFNB1P01574 187 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 SERPING1P05155 500 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 CETPP11597 493 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 VAMP7P51809 220 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 DGKZQ13574 1117 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 MTF1Q14872 753 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 ARHGEF6Q15052 776 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 TRPM4Q8TD43 1214 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 UBLCP1Q8WVY7 318 aaPredicted RBP12.85□□□□□ -0.35
SGSM3-209ENST00000478085 ZNF653Q96CK0 615 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 GPBP1L1Q9HC44 474 aaPredicted RBP12.85□□□□□ -0.35
SGSM3-209ENST00000478085 SLC25A27O95847 323 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 GTF2F1P35269 517 aaKnown RBP eCLIP12.85□□□□□ -0.357e-7■■■■□ 25.3
SGSM3-209ENST00000478085 PRKCEQ02156 737 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 MOB2Q70IA6 237 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 CCDC170Q8IYT3 715 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 OPTNQ96CV9 577 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 UNC45AQ9H3U1 944 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 TSKSQ9UJT2 592 aa12.85□□□□□ -0.35
SGSM3-209ENST00000478085 PARP4Q9UKK3 1724 aaKnown RBP12.85□□□□□ -0.35
SGSM3-209ENST00000478085 KRIT1O00522 736 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
SGSM3-209ENST00000478085 TCP1P17987 556 aaKnown RBP12.84□□□□□ -0.35
SGSM3-209ENST00000478085 CYP11B2P19099 503 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 COPB2P35606 906 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 SNX16P57768 344 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 FAM193BQ96PV7 902 aaPredicted RBP12.84□□□□□ -0.35
SGSM3-209ENST00000478085 NUDT12Q9BQG2 462 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 PCDHA13Q9Y5I0 950 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 PPP1R3GB7ZBB8 358 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 PDXKO00764 312 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 ZSCAN20P17040 1043 aaPredicted RBP12.84□□□□□ -0.35
SGSM3-209ENST00000478085 HOXA7P31268 230 aaPredicted RBP12.84□□□□□ -0.35
SGSM3-209ENST00000478085 BBXQ8WY36 941 aaPredicted RBP12.84□□□□□ -0.35
SGSM3-209ENST00000478085 PDCD2LQ9BRP1 358 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 MOV10L1Q9BXT6 1211 aaKnown RBP12.84□□□□□ -0.35
SGSM3-209ENST00000478085 TACC3Q9Y6A5 838 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 SYNJ2BP-COX16A0A087WUM0 186 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 USP27XA6NNY8 438 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 FAM86B1E9PN63 330 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 FAM86B2P0C5J1 330 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 ATF7P17544 494 aaPredicted RBP12.84□□□□□ -0.35
SGSM3-209ENST00000478085 PTPRAP18433 802 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 ACOT2P49753 483 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 NKX2-3Q8TAU0 364 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 MKL1Q969V6 931 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 CCDC77Q9BR77 488 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 RRAGCQ9HB90 399 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 GBA2Q9HCG7 927 aaPredicted RBP12.84□□□□□ -0.35
SGSM3-209ENST00000478085 COX16Q9P0S2 106 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 DDX41Q9UJV9 622 aaKnown RBP12.84□□□□□ -0.35
SGSM3-209ENST00000478085 CDC23Q9UJX2 597 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 UTP11Q9Y3A2 253 aaKnown RBP12.84□□□□□ -0.35
SGSM3-209ENST00000478085 RGPD5Q99666 1765 aa12.84□□□□□ -0.35
SGSM3-209ENST00000478085 VIRMAQ69YN4 1812 aaKnown RBP12.84□□□□□ -0.35
SGSM3-209ENST00000478085 VWA5AO00534 786 aa12.83□□□□□ -0.35
SGSM3-209ENST00000478085 LDHAP00338 332 aaKnown RBP12.83□□□□□ -0.35
SGSM3-209ENST00000478085 ABL1P00519 1130 aa12.83□□□□□ -0.35
SGSM3-209ENST00000478085 PSMC6P62333 389 aa12.83□□□□□ -0.35
SGSM3-209ENST00000478085 LRRC71Q8N4P6 559 aa12.83□□□□□ -0.35
SGSM3-209ENST00000478085 MRRFQ96E11 262 aaKnown RBP12.83□□□□□ -0.35
SGSM3-209ENST00000478085 IL17RAQ96F46 866 aa12.83□□□□□ -0.35
SGSM3-209ENST00000478085 P2RX7Q99572 595 aaKnown RBP12.83□□□□□ -0.35
SGSM3-209ENST00000478085 GPRC5CQ9NQ84 441 aa12.83□□□□□ -0.35
SGSM3-209ENST00000478085 EMSYQ7Z589 1322 aa12.83□□□□□ -0.36
SGSM3-209ENST00000478085 MAFGO15525 162 aa12.83□□□□□ -0.36
SGSM3-209ENST00000478085 POLR2BP30876 1174 aaKnown RBP12.83□□□□□ -0.36
SGSM3-209ENST00000478085 RINT1Q6NUQ1 792 aa12.83□□□□□ -0.36
SGSM3-209ENST00000478085 FAM149B1Q96BN6 582 aa12.83□□□□□ -0.36
SGSM3-209ENST00000478085 PARK7Q99497 189 aaKnown RBP12.83□□□□□ -0.36
SGSM3-209ENST00000478085 CHP1Q99653 195 aa12.83□□□□□ -0.36
SGSM3-209ENST00000478085 KIFC3Q9BVG8 833 aa12.83□□□□□ -0.36
SGSM3-209ENST00000478085 ABCC6O95255 1503 aa12.83□□□□□ -0.36
SGSM3-209ENST00000478085 ZEB2O60315 1214 aa12.83□□□□□ -0.36
SGSM3-209ENST00000478085 C6orf222P0C671 652 aaPredicted RBP12.83□□□□□ -0.36
SGSM3-209ENST00000478085 ABCD1P33897 745 aa12.83□□□□□ -0.36
SGSM3-209ENST00000478085 PHKA2P46019 1235 aa12.83□□□□□ -0.36
SGSM3-209ENST00000478085 MMP14P50281 582 aa12.83□□□□□ -0.36
SGSM3-209ENST00000478085 FXR1P51114 621 aaKnown RBP eCLIP12.83□□□□□ -0.36
SGSM3-209ENST00000478085 ACTR2P61160 394 aa12.83□□□□□ -0.36
SGSM3-209ENST00000478085 TWF2Q6IBS0 349 aaKnown RBP12.83□□□□□ -0.36
SGSM3-209ENST00000478085 IFT20Q8IY31 132 aa12.83□□□□□ -0.36
SGSM3-209ENST00000478085 SYT2Q8N9I0 419 aaPredicted RBP12.83□□□□□ -0.36
SGSM3-209ENST00000478085 PAIP2Q9BPZ3 127 aaKnown RBP12.83□□□□□ -0.36
SGSM3-209ENST00000478085 AGPAT5Q9NUQ2 364 aa12.83□□□□□ -0.36
SGSM3-209ENST00000478085 AGO2Q9UKV8 859 aaKnown RBP12.83□□□□□ -0.36
SGSM3-209ENST00000478085 CAPN9O14815 690 aa12.83□□□□□ -0.36
SGSM3-209ENST00000478085 WHAMMP3Q1A5X7 153 aa12.83□□□□□ -0.36
SGSM3-209ENST00000478085 SND1Q7KZF4 910 aaKnown RBP eCLIP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms