RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B MRX11Q03079 207 aa0.05□□□□□ -2.4
snR39BsnR39B ARR1Q06596 294 aa0.05□□□□□ -2.4
snR39BsnR39B SIL1Q08199 421 aa0.05□□□□□ -2.4
snR39BsnR39B YML133CQ03099 1374 aa0.05□□□□□ -2.4
snR39BsnR39B YLL067CQ07888 1374 aa0.05□□□□□ -2.4
snR39BsnR39B YLL066CQ99208 1374 aa0.05□□□□□ -2.4
snR39BsnR39B SCEIP03882 235 aa0.04□□□□□ -2.4
snR39BsnR39B PHO80P20052 293 aa0.04□□□□□ -2.4
snR39BsnR39B BRF1P29056 596 aa0.04□□□□□ -2.4
snR39BsnR39B ERG3P32353 365 aa0.04□□□□□ -2.4
snR39BsnR39B SPO23P33757 523 aa0.04□□□□□ -2.4
snR39BsnR39B NRG2P38082 220 aa0.04□□□□□ -2.4
snR39BsnR39B YMR262WP38430 313 aa0.04□□□□□ -2.4
snR39BsnR39B YER084WP40057 128 aa0.04□□□□□ -2.4
snR39BsnR39B HXT14P42833 540 aa0.04□□□□□ -2.4
snR39BsnR39B YCH1P42937 148 aa0.04□□□□□ -2.4
snR39BsnR39B YGR015CP53208 328 aa0.04□□□□□ -2.4
snR39BsnR39B TRM112P53738 135 aaPredicted RBP0.04□□□□□ -2.4
snR39BsnR39B CGI121Q03705 181 aaKnown RBP0.04□□□□□ -2.4
snR39BsnR39B ATG29Q12092 213 aa0.04□□□□□ -2.4
snR39BsnR39B PRP46Q12417 451 aaPredicted RBP0.04□□□□□ -2.4
snR39BsnR39B UNG1P12887 359 aa0.03□□□□□ -2.4
snR39BsnR39B BEM1P29366 551 aa0.03□□□□□ -2.4
snR39BsnR39B SSE1P32589 693 aaKnown RBP0.03□□□□□ -2.4
snR39BsnR39B MRS6P32864 603 aaKnown RBP0.03□□□□□ -2.4
snR39BsnR39B CLB6P32943 380 aa0.03□□□□□ -2.4
snR39BsnR39B CIN2P46670 268 aa0.03□□□□□ -2.4
snR39BsnR39B NAS6P50086 228 aa0.03□□□□□ -2.4
snR39BsnR39B FMS1P50264 508 aa0.03□□□□□ -2.4
snR39BsnR39B MMT1Q03218 510 aa0.03□□□□□ -2.4
snR39BsnR39B API2Q04413 109 aa0.03□□□□□ -2.4
snR39BsnR39B YDR222WQ04925 415 aa0.03□□□□□ -2.4
snR39BsnR39B FSH2Q05015 223 aa0.03□□□□□ -2.4
snR39BsnR39B YOL029CQ08187 201 aa0.03□□□□□ -2.4
snR39BsnR39B TY3A-GQ12173 290 aa0.03□□□□□ -2.4
snR39BsnR39B TY3A-IQ99219 290 aa0.03□□□□□ -2.4
snR39BsnR39B POM152P39685 1337 aa0.03□□□□□ -2.4
snR39BsnR39B SEM1O94742 89 aa0.02□□□□□ -2.41
snR39BsnR39B COX3P00420 269 aa0.02□□□□□ -2.41
snR39BsnR39B PAB1P04147 577 aaKnown RBP RIP-Chip data0.02□□□□□ -2.41not detected
snR39BsnR39B YAK1P14680 807 aa0.02□□□□□ -2.41
snR39BsnR39B URA4P20051 364 aa0.02□□□□□ -2.41
snR39BsnR39B GPX2P38143 162 aa0.02□□□□□ -2.41
snR39BsnR39B MED8P38304 223 aa0.02□□□□□ -2.41
snR39BsnR39B GGC1P38988 300 aa0.02□□□□□ -2.41
snR39BsnR39B MET18P40469 1032 aa0.02□□□□□ -2.41
snR39BsnR39B RMD8P43620 662 aa0.02□□□□□ -2.41
snR39BsnR39B ASG7P46993 209 aa0.02□□□□□ -2.41
snR39BsnR39B YJR054WP47114 497 aa0.02□□□□□ -2.41
snR39BsnR39B ABM1P47146 123 aa0.02□□□□□ -2.41
snR39BsnR39B NUP57P48837 541 aa0.02□□□□□ -2.41
snR39BsnR39B JJJ1P53863 590 aa0.02□□□□□ -2.41
snR39BsnR39B YNL095CP53932 642 aa0.02□□□□□ -2.41
snR39BsnR39B STD1Q02794 444 aa0.02□□□□□ -2.41
snR39BsnR39B RQC1Q05468 723 aaKnown RBP0.02□□□□□ -2.41
snR39BsnR39B ATP16Q12165 160 aa0.02□□□□□ -2.41
snR39BsnR39B VAM3Q12241 283 aa0.02□□□□□ -2.41
snR39BsnR39B MEX67Q99257 599 aaKnown RBP0.02□□□□□ -2.41
snR39BsnR39B ATP1P07251 545 aaKnown RBP0.01□□□□□ -2.41
snR39BsnR39B ALG1P16661 449 aa0.01□□□□□ -2.41
snR39BsnR39B RPB9P27999 122 aa0.01□□□□□ -2.41
snR39BsnR39B TIP20P33891 701 aa0.01□□□□□ -2.41
snR39BsnR39B YKR015CP36111 568 aa0.01□□□□□ -2.41
snR39BsnR39B TOS2P50078 622 aa0.01□□□□□ -2.41
snR39BsnR39B MIG2P53035 382 aa0.01□□□□□ -2.41
snR39BsnR39B SGT2Q12118 346 aaKnown RBP0.01□□□□□ -2.41
snR39BsnR39B MRX4Q12467 430 aa0.01□□□□□ -2.41
snR39BsnR39B FAR1P21268 830 aa0□□□□□ -2.41
snR39BsnR39B GPI10P30777 616 aa0□□□□□ -2.41
snR39BsnR39B RRN10P38204 145 aa0□□□□□ -2.41
snR39BsnR39B EFM1P38732 585 aa0□□□□□ -2.41
snR39BsnR39B GPI16P38875 610 aa0□□□□□ -2.41
snR39BsnR39B DAN1P47178 298 aa0□□□□□ -2.41
snR39BsnR39B CDH1P53197 566 aa0□□□□□ -2.41
snR39BsnR39B RTS3P53289 263 aa0□□□□□ -2.41
snR39BsnR39B SPR6Q01684 191 aa0□□□□□ -2.41
snR39BsnR39B UTP15Q04305 513 aaKnown RBP0□□□□□ -2.41
snR39BsnR39B INM2Q05533 292 aa0□□□□□ -2.41
snR39BsnR39B DXO1Q06349 442 aa0□□□□□ -2.41
snR39BsnR39B FEX1Q08913 375 aa0□□□□□ -2.41
snR39BsnR39B FEX2Q08991 375 aa0□□□□□ -2.41
snR39BsnR39B ADE4P04046 510 aaKnown RBP-0.01□□□□□ -2.41
snR39BsnR39B AAC3P18238 307 aa-0.01□□□□□ -2.41
snR39BsnR39B OCA4P25366 362 aa-0.01□□□□□ -2.41
snR39BsnR39B INO2P26798 304 aa-0.01□□□□□ -2.41
snR39BsnR39B TIR2P33890 251 aa-0.01□□□□□ -2.41
snR39BsnR39B NOP16P40007 231 aaKnown RBP-0.01□□□□□ -2.41
snR39BsnR39B FCY21P40039 528 aa-0.01□□□□□ -2.41
snR39BsnR39B SPO22P40511 975 aa-0.01□□□□□ -2.41
snR39BsnR39B YGR117CP53270 476 aa-0.01□□□□□ -2.41
snR39BsnR39B SYF2P53277 215 aaPredicted RBP-0.01□□□□□ -2.41
snR39BsnR39B RRN9P53437 365 aa-0.01□□□□□ -2.41
snR39BsnR39B SLT2Q00772 484 aa-0.01□□□□□ -2.41
snR39BsnR39B RPA49Q01080 415 aaPredicted RBP-0.01□□□□□ -2.41
snR39BsnR39B ECM19Q06011 112 aa-0.01□□□□□ -2.41
snR39BsnR39B COG4Q06096 861 aa-0.01□□□□□ -2.41
snR39BsnR39B VTA1Q06263 330 aa-0.01□□□□□ -2.41
snR39BsnR39B OPY2Q06810 360 aa-0.01□□□□□ -2.41
snR39BsnR39B DIB1Q06819 143 aaPredicted RBP-0.01□□□□□ -2.41
snR39BsnR39B YPL264CQ08980 353 aa-0.01□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 93.2 ms