RNA–Protein interactions for RNA: YPL160W

CDC60, Transcript of Cytosolic leucyl tRNA synthetase, yeastyeast

Gene CDC60, Length 3,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC60YPL160W TEF1P02994 458 aaKnown RBP1.9□□□□□ -2.11
CDC60YPL160W OPI3P05375 206 aa1.9□□□□□ -2.11
CDC60YPL160W SAM1P10659 382 aaKnown RBP1.9□□□□□ -2.11
CDC60YPL160W PTP1P25044 335 aa1.9□□□□□ -2.11
CDC60YPL160W BUD23P25627 275 aaPredicted RBP1.9□□□□□ -2.11
CDC60YPL160W YMC1P32331 307 aa1.9□□□□□ -2.11
CDC60YPL160W KAR9P32526 644 aa1.9□□□□□ -2.11
CDC60YPL160W UTP11P34247 250 aaPredicted RBP1.9□□□□□ -2.11
CDC60YPL160W OCT1P35999 772 aa1.9□□□□□ -2.11
CDC60YPL160W YKL162CP36052 402 aa1.9□□□□□ -2.11
CDC60YPL160W PHO90P39535 881 aa1.9□□□□□ -2.11
CDC60YPL160W YER034WP40022 185 aaKnown RBP1.9□□□□□ -2.11
CDC60YPL160W ARG2P40360 574 aa1.9□□□□□ -2.11
CDC60YPL160W MSS2P40990 351 aa1.9□□□□□ -2.11
CDC60YPL160W CTK3P46963 296 aaPredicted RBP1.9□□□□□ -2.11
CDC60YPL160W ABM1P47146 123 aa1.9□□□□□ -2.11
CDC60YPL160W KAP114P53067 1004 aa1.9□□□□□ -2.11
CDC60YPL160W LIF1P53150 421 aa1.9□□□□□ -2.11
CDC60YPL160W RRN9P53437 365 aa1.9□□□□□ -2.11
CDC60YPL160W MPP6P53725 186 aaPredicted RBP1.9□□□□□ -2.11
CDC60YPL160W ESBP6P53918 673 aa1.9□□□□□ -2.11
CDC60YPL160W RHO4Q00246 291 aa1.9□□□□□ -2.11
CDC60YPL160W FAR8Q05040 523 aa1.9□□□□□ -2.11
CDC60YPL160W ATG38Q05789 226 aaKnown RBP1.9□□□□□ -2.11
CDC60YPL160W VIK1Q12045 647 aa1.9□□□□□ -2.11
CDC60YPL160W PUS9Q12069 462 aa1.9□□□□□ -2.11
CDC60YPL160W ATG31Q12421 196 aa1.9□□□□□ -2.11
CDC60YPL160W DCP1Q12517 231 aaPredicted RBP1.9□□□□□ -2.11
CDC60YPL160W YLR111WQ12528 110 aa1.9□□□□□ -2.11
CDC60YPL160W COX2P00410 251 aa1.89□□□□□ -2.11
CDC60YPL160W ATP6P00854 259 aa1.89□□□□□ -2.11
CDC60YPL160W MRP2P10663 115 aaPredicted RBP1.89□□□□□ -2.11
CDC60YPL160W PEP5P12868 1029 aa1.89□□□□□ -2.11
CDC60YPL160W RSR1P13856 272 aa1.89□□□□□ -2.11
CDC60YPL160W FRS2P15625 503 aaKnown RBP1.89□□□□□ -2.11
CDC60YPL160W SPE2P21182 396 aa1.89□□□□□ -2.11
CDC60YPL160W YCR006CP25350 157 aa1.89□□□□□ -2.11
CDC60YPL160W VPH2P32341 215 aa1.89□□□□□ -2.11
CDC60YPL160W CSE1P33307 960 aa1.89□□□□□ -2.11
CDC60YPL160W PCL5P38794 229 aa1.89□□□□□ -2.11
CDC60YPL160W PEX18P38855 283 aa1.89□□□□□ -2.11
CDC60YPL160W SIM1P40472 476 aa1.89□□□□□ -2.11
CDC60YPL160W SLM1P40485 686 aa1.89□□□□□ -2.11
CDC60YPL160W PAC11P40960 533 aa1.89□□□□□ -2.11
CDC60YPL160W COS1P53822 381 aa1.89□□□□□ -2.11
CDC60YPL160W YPL014WQ02606 381 aa1.89□□□□□ -2.11
CDC60YPL160W NUP100Q02629 959 aa1.89□□□□□ -2.11
CDC60YPL160W GIP3Q03016 1276 aa1.89□□□□□ -2.11
CDC60YPL160W TAF12Q03761 539 aa1.89□□□□□ -2.11
CDC60YPL160W DYN3Q04949 312 aa1.89□□□□□ -2.11
CDC60YPL160W SET6Q12529 373 aa1.89□□□□□ -2.11
CDC60YPL160W STE2D6VTK4 431 aa1.89□□□□□ -2.11
CDC60YPL160W GAL4P04386 881 aa1.89□□□□□ -2.11
CDC60YPL160W PDE2P06776 526 aa1.89□□□□□ -2.11
CDC60YPL160W SPT3P06844 337 aa1.89□□□□□ -2.11
CDC60YPL160W HPR1P17629 752 aaKnown RBP1.89□□□□□ -2.11
CDC60YPL160W FAR1P21268 830 aa1.89□□□□□ -2.11
CDC60YPL160W ITR1P30605 584 aa1.89□□□□□ -2.11
CDC60YPL160W CHS7P38843 316 aa1.89□□□□□ -2.11
CDC60YPL160W RTR1P40084 226 aaPredicted RBP1.89□□□□□ -2.11
CDC60YPL160W FAU1P40099 211 aa1.89□□□□□ -2.11
CDC60YPL160W ECL1P48235 211 aa1.89□□□□□ -2.11
CDC60YPL160W MRK1P50873 501 aa1.89□□□□□ -2.11
CDC60YPL160W GPI15P53961 229 aa1.89□□□□□ -2.11
CDC60YPL160W KTR6P54070 446 aa1.89□□□□□ -2.11
CDC60YPL160W APC4Q04601 652 aa1.89□□□□□ -2.11
CDC60YPL160W ARR2Q06597 130 aa1.89□□□□□ -2.11
CDC60YPL160W GIS3Q12418 502 aa1.89□□□□□ -2.11
CDC60YPL160W PDR18P53756 1333 aa1.89□□□□□ -2.11
CDC60YPL160W TY4B-HP0C2J7 1802 aa1.89□□□□□ -2.11
CDC60YPL160W TY4B-JP47024 1803 aa1.89□□□□□ -2.11
CDC60YPL160W GDH1P07262 454 aaKnown RBP1.88□□□□□ -2.11
CDC60YPL160W RPL18AP0CX49 186 aaKnown RBP1.88□□□□□ -2.11
CDC60YPL160W RPL18BP0CX50 186 aaKnown RBP1.88□□□□□ -2.11
CDC60YPL160W MAS1P10507 462 aa1.88□□□□□ -2.11
CDC60YPL160W CDC42P19073 191 aa1.88□□□□□ -2.11
CDC60YPL160W GAS1P22146 559 aaKnown RBP1.88□□□□□ -2.11
CDC60YPL160W RPS5P26783 225 aaKnown RBP1.88□□□□□ -2.11
CDC60YPL160W HXT1P32465 570 aa1.88□□□□□ -2.11
CDC60YPL160W UTR4P32626 227 aa1.88□□□□□ -2.11
CDC60YPL160W SUL1P38359 859 aa1.88□□□□□ -2.11
CDC60YPL160W PRP39P39682 629 aaKnown RBP1.88□□□□□ -2.11
CDC60YPL160W AIM10P39965 576 aaKnown RBP1.88□□□□□ -2.11
CDC60YPL160W YER085CP40058 173 aa1.88□□□□□ -2.11
CDC60YPL160W UTP18P40362 594 aaPredicted RBP1.88□□□□□ -2.11
CDC60YPL160W RTC4P53850 401 aa1.88□□□□□ -2.11
CDC60YPL160W YNL040WP53960 456 aaPredicted RBP1.88□□□□□ -2.11
CDC60YPL160W ARK1P53974 638 aa1.88□□□□□ -2.11
CDC60YPL160W FMP42Q04991 504 aa1.88□□□□□ -2.11
CDC60YPL160W BNA5Q05979 453 aa1.88□□□□□ -2.11
CDC60YPL160W RSA1Q08932 381 aa1.88□□□□□ -2.11
CDC60YPL160W RUP1Q12242 671 aa1.88□□□□□ -2.11
CDC60YPL160W FLO1P32768 1537 aa1.88□□□□□ -2.11
CDC60YPL160W TDH3P00359 332 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
CDC60YPL160W RPO26P20435 155 aa1.88□□□□□ -2.11
CDC60YPL160W CKI1P20485 582 aa1.88□□□□□ -2.11
CDC60YPL160W CWP1P28319 239 aa1.88□□□□□ -2.11
CDC60YPL160W ECT1P33412 323 aa1.88□□□□□ -2.11
CDC60YPL160W YKL023WP36103 277 aaKnown RBP1.88□□□□□ -2.11
CDC60YPL160W YKR015CP36111 568 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms