RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C TY1B-NL2Q99337 1749 aaKnown RBP2.41□□□□□ -2.02
SHE4YOR035C SSC1P0CS90 654 aaKnown RBP2.41□□□□□ -2.02
SHE4YOR035C AAT2P23542 418 aaKnown RBP2.41□□□□□ -2.02
SHE4YOR035C ATM1P40416 690 aa2.41□□□□□ -2.02
SHE4YOR035C DFG10P40526 253 aa2.41□□□□□ -2.02
SHE4YOR035C MST27P53176 234 aa2.41□□□□□ -2.02
SHE4YOR035C TDA1Q03533 586 aa2.41□□□□□ -2.02
SHE4YOR035C LOT6Q07923 191 aa2.41□□□□□ -2.02
SHE4YOR035C HTZ1Q12692 134 aaKnown RBP2.41□□□□□ -2.02
SHE4YOR035C NUM1Q00402 2748 aa2.41□□□□□ -2.02
SHE4YOR035C TPK3P05986 398 aa2.41□□□□□ -2.02
SHE4YOR035C DOA1P36037 715 aa2.41□□□□□ -2.02
SHE4YOR035C YAP3P38749 330 aa2.41□□□□□ -2.02
SHE4YOR035C OXA1P39952 402 aa2.41□□□□□ -2.02
SHE4YOR035C STE24P47154 453 aa2.41□□□□□ -2.02
SHE4YOR035C VPS9P54787 451 aa2.41□□□□□ -2.02
SHE4YOR035C MEH1Q02205 184 aa2.41□□□□□ -2.02
SHE4YOR035C YDR541CQ03049 344 aa2.41□□□□□ -2.02
SHE4YOR035C ECM7Q06200 448 aa2.41□□□□□ -2.02
SHE4YOR035C RNH203Q12338 110 aa2.41□□□□□ -2.02
SHE4YOR035C YCR024C-BQ3E7Z8 88 aa2.41□□□□□ -2.02
SHE4YOR035C PAB1P04147 577 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
SHE4YOR035C RPL1AP0CX43 217 aaKnown RBP2.4□□□□□ -2.03
SHE4YOR035C RPL1BP0CX44 217 aaKnown RBP2.4□□□□□ -2.03
SHE4YOR035C PRR1P28708 518 aa2.4□□□□□ -2.03
SHE4YOR035C YSC83P32792 385 aa2.4□□□□□ -2.03
SHE4YOR035C PEX5P35056 612 aa2.4□□□□□ -2.03
SHE4YOR035C SPT10P35208 640 aa2.4□□□□□ -2.03
SHE4YOR035C YHK8P38776 514 aa2.4□□□□□ -2.03
SHE4YOR035C PAC11P40960 533 aa2.4□□□□□ -2.03
SHE4YOR035C EGT2P42835 1041 aa2.4□□□□□ -2.03
SHE4YOR035C CRH1P53301 507 aa2.4□□□□□ -2.03
SHE4YOR035C IQG1Q12280 1495 aa2.4□□□□□ -2.03
SHE4YOR035C CHC1P22137 1653 aaKnown RBP2.4□□□□□ -2.03
SHE4YOR035C SOD1P00445 154 aaKnown RBP2.39□□□□□ -2.03
SHE4YOR035C RPB5P20434 215 aa2.39□□□□□ -2.03
SHE4YOR035C PRS1P32895 427 aaKnown RBP2.39□□□□□ -2.03
SHE4YOR035C SKT5P34226 696 aa2.39□□□□□ -2.03
SHE4YOR035C PFF1P38244 976 aa2.39□□□□□ -2.03
SHE4YOR035C LRP1P38801 184 aaKnown RBP2.39□□□□□ -2.03
SHE4YOR035C MNL1P38888 796 aa2.39□□□□□ -2.03
SHE4YOR035C GDI1P39958 451 aaKnown RBP2.39□□□□□ -2.03
SHE4YOR035C PMT5P52867 743 aa2.39□□□□□ -2.03
SHE4YOR035C TRM112P53738 135 aaPredicted RBP2.39□□□□□ -2.03
SHE4YOR035C ARF1P11076 181 aaKnown RBP2.39□□□□□ -2.03
SHE4YOR035C RAD5P32849 1169 aaPredicted RBP2.39□□□□□ -2.03
SHE4YOR035C ECM8P38246 354 aa2.39□□□□□ -2.03
SHE4YOR035C CLD1P53264 445 aa2.39□□□□□ -2.03
SHE4YOR035C COS1P53822 381 aa2.39□□□□□ -2.03
SHE4YOR035C ASA1Q06822 443 aa2.39□□□□□ -2.03
SHE4YOR035C CMS1Q07897 291 aaKnown RBP2.39□□□□□ -2.03
SHE4YOR035C YOP1Q12402 180 aa2.39□□□□□ -2.03
SHE4YOR035C BCK1Q01389 1478 aa2.39□□□□□ -2.03
SHE4YOR035C BUD3P25558 1636 aa2.38□□□□□ -2.03
SHE4YOR035C KAP104P38217 918 aaKnown RBP2.38□□□□□ -2.03
SHE4YOR035C BAT1P38891 393 aaKnown RBP2.38□□□□□ -2.03
SHE4YOR035C YNL208WP40159 199 aaKnown RBP2.38□□□□□ -2.03
SHE4YOR035C TOS2P50078 622 aa2.38□□□□□ -2.03
SHE4YOR035C PRP3Q03338 469 aaPredicted RBP2.38□□□□□ -2.03
SHE4YOR035C NDL1Q06568 189 aa2.38□□□□□ -2.03
SHE4YOR035C BSC6Q08280 497 aa2.38□□□□□ -2.03
SHE4YOR035C HAP1P0CE41 1502 aa2.38□□□□□ -2.03
SHE4YOR035C PDR12Q02785 1511 aa2.38□□□□□ -2.03
SHE4YOR035C RPL12AP0CX53 165 aaKnown RBP2.38□□□□□ -2.03
SHE4YOR035C RPL12BP0CX54 165 aa2.38□□□□□ -2.03
SHE4YOR035C HSP26P15992 214 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
SHE4YOR035C MDL1P33310 695 aa2.38□□□□□ -2.03
SHE4YOR035C URC2Q04411 772 aa2.38□□□□□ -2.03
SHE4YOR035C NAG1Q8TGN9 163 aa2.38□□□□□ -2.03
SHE4YOR035C STU1P38198 1513 aa2.37□□□□□ -2.03
SHE4YOR035C NAT1P12945 854 aaKnown RBP2.37□□□□□ -2.03
SHE4YOR035C IES6P32617 166 aa2.37□□□□□ -2.03
SHE4YOR035C MCR1P36060 302 aaKnown RBP2.37□□□□□ -2.03
SHE4YOR035C DED81P38707 554 aaKnown RBP2.37□□□□□ -2.03
SHE4YOR035C GEP4P38812 185 aa2.37□□□□□ -2.03
SHE4YOR035C TSC11P40061 1430 aa2.37□□□□□ -2.03
SHE4YOR035C ATG18P43601 500 aa2.37□□□□□ -2.03
SHE4YOR035C BNS1P50084 137 aa2.37□□□□□ -2.03
SHE4YOR035C YIP5P53108 310 aa2.37□□□□□ -2.03
SHE4YOR035C TSA2Q04120 196 aa2.37□□□□□ -2.03
SHE4YOR035C YET2Q04210 160 aa2.37□□□□□ -2.03
SHE4YOR035C YPR117WQ06116 2489 aa2.37□□□□□ -2.03
SHE4YOR035C YSP2Q06681 1438 aa2.37□□□□□ -2.03
SHE4YOR035C YPR091CQ06833 770 aa2.37□□□□□ -2.03
SHE4YOR035C VTH1P40438 1549 aa2.37□□□□□ -2.03
SHE4YOR035C VTH2P40890 1549 aa2.37□□□□□ -2.03
SHE4YOR035C GPX2P38143 162 aa2.37□□□□□ -2.03
SHE4YOR035C PTI1P39927 425 aaPredicted RBP2.37□□□□□ -2.03
SHE4YOR035C RTT102P53330 157 aa2.37□□□□□ -2.03
SHE4YOR035C MFG1Q07684 458 aa2.37□□□□□ -2.03
SHE4YOR035C AAD15Q08361 143 aa2.37□□□□□ -2.03
SHE4YOR035C YOR1P53049 1477 aa2.37□□□□□ -2.03
SHE4YOR035C TIR2P33890 251 aa2.36□□□□□ -2.03
SHE4YOR035C ASN2P49090 572 aaKnown RBP2.36□□□□□ -2.03
SHE4YOR035C ERO1Q03103 563 aa2.36□□□□□ -2.03
SHE4YOR035C MLP2P40457 1679 aa2.36□□□□□ -2.03
SHE4YOR035C ANR2P36090 516 aaPredicted RBP2.36□□□□□ -2.03
SHE4YOR035C SPP381P38282 291 aaPredicted RBP2.36□□□□□ -2.03
SHE4YOR035C SEC28P40509 296 aaKnown RBP2.36□□□□□ -2.03
SHE4YOR035C EPL1P43572 832 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms