RNA–Protein interactions for RNA: YML075C

HMG1, Transcript of HMG-CoA reductase, yeast

Gene HMG1, Length 3,165 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMG1	YML075C	YNR065C	P53751	1116 aa		3.87	□□□□□ -1.79
HMG1	YML075C	RPL6A	Q02326	176 aa	Known RBP	3.87	□□□□□ -1.79
HMG1	YML075C	VHS1	Q03785	461 aa		3.87	□□□□□ -1.79
HMG1	YML075C	IWR1	Q07532	353 aa	Predicted RBP	3.87	□□□□□ -1.79
HMG1	YML075C	YPL199C	Q08954	240 aa		3.87	□□□□□ -1.79
HMG1	YML075C	SLF1	Q12034	447 aa	Known RBP	3.87	□□□□□ -1.79
HMG1	YML075C	RRP42	Q12277	265 aa	Predicted RBP	3.87	□□□□□ -1.79
HMG1	YML075C	ATG34	Q12292	412 aa		3.87	□□□□□ -1.79
HMG1	YML075C	RGT2	Q12300	763 aa		3.87	□□□□□ -1.79
HMG1	YML075C	THP2	O13539	261 aa	Known RBP	3.87	□□□□□ -1.79
HMG1	YML075C	QCR2	P07257	368 aa		3.87	□□□□□ -1.79
HMG1	YML075C	PPR1	P07272	904 aa	Predicted RBP	3.87	□□□□□ -1.79
HMG1	YML075C	ERG20	P08524	352 aa	Known RBP	3.87	□□□□□ -1.79
HMG1	YML075C	PEP5	P12868	1029 aa		3.87	□□□□□ -1.79
HMG1	YML075C	SEC65	P29478	273 aa		3.87	□□□□□ -1.79
HMG1	YML075C	GSH1	P32477	678 aa		3.87	□□□□□ -1.79
HMG1	YML075C	WBP1	P33767	430 aa	Known RBP	3.87	□□□□□ -1.79
HMG1	YML075C	EFM1	P38732	585 aa		3.87	□□□□□ -1.79
HMG1	YML075C	SPC97	P38863	823 aa		3.87	□□□□□ -1.79
HMG1	YML075C	MSS4	P38994	779 aa		3.87	□□□□□ -1.79
HMG1	YML075C	YAP5	P40574	245 aa		3.87	□□□□□ -1.79
HMG1	YML075C	PSA1	P41940	361 aa	Known RBP	3.87	□□□□□ -1.79
HMG1	YML075C	YJR149W	P47177	404 aa		3.87	□□□□□ -1.79
HMG1	YML075C	ASN1	P49089	572 aa	Known RBP	3.87	□□□□□ -1.79
HMG1	YML075C	SCS3	P53012	380 aa		3.87	□□□□□ -1.79
HMG1	YML075C	UFD1	P53044	361 aa		3.87	□□□□□ -1.79
HMG1	YML075C	ALG11	P53954	548 aa	Known RBP	3.87	□□□□□ -1.79
HMG1	YML075C	CWC27	Q02770	301 aa		3.87	□□□□□ -1.79
HMG1	YML075C	YDR179W-A	Q03983	463 aa		3.87	□□□□□ -1.79
HMG1	YML075C	CRR1	Q05790	422 aa		3.87	□□□□□ -1.79
HMG1	YML075C	ATG23	Q06671	453 aa		3.87	□□□□□ -1.79
HMG1	YML075C	LEA1	Q08963	238 aa	Predicted RBP	3.87	□□□□□ -1.79
HMG1	YML075C	YDR157W	A0A023PZE8	133 aa		3.86	□□□□□ -1.79
HMG1	YML075C	RPP2A	P05319	106 aa	Known RBP	3.86	□□□□□ -1.79
HMG1	YML075C	URA6	P15700	204 aa		3.86	□□□□□ -1.79
HMG1	YML075C	PPA2	P28239	310 aa		3.86	□□□□□ -1.79
HMG1	YML075C	RAD14	P28519	371 aa		3.86	□□□□□ -1.79
HMG1	YML075C	PRE4	P30657	266 aa		3.86	□□□□□ -1.79
HMG1	YML075C	SPC34	P36131	295 aa		3.86	□□□□□ -1.79
HMG1	YML075C	FAU1	P40099	211 aa		3.86	□□□□□ -1.79
HMG1	YML075C	MAF1	P41910	395 aa		3.86	□□□□□ -1.79
HMG1	YML075C	FMP32	P43557	207 aa		3.86	□□□□□ -1.79
HMG1	YML075C	YJL016W	P47072	561 aa		3.86	□□□□□ -1.79
HMG1	YML075C	YGL036W	P53185	909 aa	Predicted RBP	3.86	□□□□□ -1.79
HMG1	YML075C	INN1	P53901	409 aa		3.86	□□□□□ -1.79
HMG1	YML075C	DID2	P69771	204 aa		3.86	□□□□□ -1.79
HMG1	YML075C	ARG5,6	Q01217	863 aa		3.86	□□□□□ -1.79
HMG1	YML075C	DYN2	Q02647	92 aa		3.86	□□□□□ -1.79
HMG1	YML075C	ECM30	Q06673	1274 aa		3.86	□□□□□ -1.79
HMG1	YML075C	CDA1	Q06702	301 aa		3.86	□□□□□ -1.79
HMG1	YML075C	IES3	Q12345	250 aa		3.86	□□□□□ -1.79
HMG1	YML075C	YPT1	P01123	206 aa	Known RBP	3.86	□□□□□ -1.79
HMG1	YML075C	NHP6B	P11633	99 aa	Known RBP	3.86	□□□□□ -1.79
HMG1	YML075C	FUB1	P25659	250 aa		3.86	□□□□□ -1.79
HMG1	YML075C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	not detected
HMG1	YML075C	RAD23	P32628	398 aa	Known RBP	3.86	□□□□□ -1.79
HMG1	YML075C	TIP20	P33891	701 aa		3.86	□□□□□ -1.79
HMG1	YML075C	NTR2	P36118	322 aa	Predicted RBP	3.86	□□□□□ -1.79
HMG1	YML075C	DER1	P38307	211 aa		3.86	□□□□□ -1.79
HMG1	YML075C	LAS21	P40367	830 aa		3.86	□□□□□ -1.79
HMG1	YML075C	YGL176C	P46945	554 aa		3.86	□□□□□ -1.79
HMG1	YML075C	UBC9	P50623	157 aa	Predicted RBP	3.86	□□□□□ -1.79
HMG1	YML075C	RMD9	P53140	646 aa	Known RBP	3.86	□□□□□ -1.79
HMG1	YML075C	MAL13	P53338	473 aa		3.86	□□□□□ -1.79
HMG1	YML075C	MTD1	Q02046	320 aa	Known RBP	3.86	□□□□□ -1.79
HMG1	YML075C	OST6	Q03723	332 aa		3.86	□□□□□ -1.79
HMG1	YML075C	YDR132C	Q03900	495 aa		3.86	□□□□□ -1.79
HMG1	YML075C	CAB5	Q03941	241 aa		3.86	□□□□□ -1.79
HMG1	YML075C	YHM2	Q04013	314 aa		3.86	□□□□□ -1.79
HMG1	YML075C	VTA1	Q06263	330 aa		3.86	□□□□□ -1.79
HMG1	YML075C	YRA1	Q12159	226 aa	Known RBP	3.86	□□□□□ -1.79
HMG1	YML075C	YKL183C-A	Q3E765	70 aa		3.86	□□□□□ -1.79
HMG1	YML075C	GLN3	P18494	730 aa		3.86	□□□□□ -1.79
HMG1	YML075C	RNA15	P25299	296 aa	Predicted RBP	3.86	□□□□□ -1.79
HMG1	YML075C	RFA3	P26755	122 aa	Known RBP	3.86	□□□□□ -1.79
HMG1	YML075C	CDC13	P32797	924 aa	Known RBP	3.86	□□□□□ -1.79
HMG1	YML075C	TRM2	P33753	639 aa		3.86	□□□□□ -1.79
HMG1	YML075C	SLM4	P38247	162 aa		3.86	□□□□□ -1.79
HMG1	YML075C	VID24	P38263	362 aa		3.86	□□□□□ -1.79
HMG1	YML075C	PPE1	P38796	400 aa		3.86	□□□□□ -1.79
HMG1	YML075C	PRP39	P39682	629 aa	Known RBP	3.86	□□□□□ -1.79
HMG1	YML075C	YER158C	P40095	573 aa		3.86	□□□□□ -1.79
HMG1	YML075C	YFL040W	P43562	540 aa		3.86	□□□□□ -1.79
HMG1	YML075C	AVT1	P47082	602 aa		3.86	□□□□□ -1.79
HMG1	YML075C	GLO1	P50107	326 aa		3.86	□□□□□ -1.79
HMG1	YML075C	YNL184C	P53876	108 aa		3.86	□□□□□ -1.79
HMG1	YML075C	NOG1	Q02892	647 aa	Known RBP	3.86	□□□□□ -1.79
HMG1	YML075C	SNO1	Q03144	224 aa		3.86	□□□□□ -1.79
HMG1	YML075C	ATP25	Q03153	612 aa		3.86	□□□□□ -1.79
HMG1	YML075C	TPO3	Q06451	622 aa		3.86	□□□□□ -1.79
HMG1	YML075C	SCP1	Q08873	200 aa		3.86	□□□□□ -1.79
HMG1	YML075C	SAM3	Q08986	587 aa		3.86	□□□□□ -1.79
HMG1	YML075C	VCX1	Q99385	411 aa		3.86	□□□□□ -1.79
HMG1	YML075C	YOR304C-A	O14468	76 aa		3.85	□□□□□ -1.79
HMG1	YML075C	CDC8	P00572	216 aa		3.85	□□□□□ -1.79
HMG1	YML075C	IPP1	P00817	287 aa	Known RBP	3.85	□□□□□ -1.79
HMG1	YML075C	CDC7	P06243	507 aa		3.85	□□□□□ -1.79
HMG1	YML075C	SPO12	P17123	173 aa		3.85	□□□□□ -1.79
HMG1	YML075C	VPS34	P22543	875 aa		3.85	□□□□□ -1.79
HMG1	YML075C	MRPL32	P25348	183 aa		3.85	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms