RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C IRC10Q08118 586 aa4.19□□□□□ -1.74
CDC42YLR229C YNG1Q08465 219 aa4.19□□□□□ -1.74
CDC42YLR229C FEX2Q08991 375 aa4.19□□□□□ -1.74
CDC42YLR229C TGL5Q12043 749 aa4.19□□□□□ -1.74
CDC42YLR229C YOR012WQ12351 137 aa4.19□□□□□ -1.74
CDC42YLR229C RPN6Q12377 434 aa4.19□□□□□ -1.74
CDC42YLR229C YOR019WQ99248 730 aa4.19□□□□□ -1.74
CDC42YLR229C YOR338WQ99326 363 aa4.19□□□□□ -1.74
CDC42YLR229C SUC2P00724 532 aa4.18□□□□□ -1.74
CDC42YLR229C HXK2P04807 486 aaKnown RBP4.18□□□□□ -1.74
CDC42YLR229C PUT2P07275 575 aa4.18□□□□□ -1.74
CDC42YLR229C LAT1P12695 482 aaKnown RBP4.18□□□□□ -1.74
CDC42YLR229C APA1P16550 321 aaKnown RBP4.18□□□□□ -1.74
CDC42YLR229C SGV1P23293 657 aaKnown RBP4.18□□□□□ -1.74
CDC42YLR229C GRR1P24814 1151 aa4.18□□□□□ -1.74
CDC42YLR229C SPS19P32573 292 aaKnown RBP4.18□□□□□ -1.74
CDC42YLR229C TIP20P33891 701 aa4.18□□□□□ -1.74
CDC42YLR229C TAF14P35189 244 aa4.18□□□□□ -1.74
CDC42YLR229C SHM2P37291 469 aaKnown RBP4.18□□□□□ -1.74
CDC42YLR229C RIB1P38066 345 aa4.18□□□□□ -1.74
CDC42YLR229C IFA38P38286 347 aa4.18□□□□□ -1.74
CDC42YLR229C MLH1P38920 769 aa4.18□□□□□ -1.74
CDC42YLR229C SWD1P39706 426 aa4.18□□□□□ -1.74
CDC42YLR229C ISC1P40015 477 aaKnown RBP4.18□□□□□ -1.74
CDC42YLR229C PHM8P40025 321 aa4.18□□□□□ -1.74
CDC42YLR229C AYR1P40471 297 aa4.18□□□□□ -1.74
CDC42YLR229C PHB1P40961 287 aa4.18□□□□□ -1.74
CDC42YLR229C RMD8P43620 662 aa4.18□□□□□ -1.74
CDC42YLR229C TIS11P47977 285 aa4.18□□□□□ -1.74
CDC42YLR229C MNT2P53059 558 aa4.18□□□□□ -1.74
CDC42YLR229C CPR8P53728 308 aa4.18□□□□□ -1.74
CDC42YLR229C VAC7P53950 1165 aa4.18□□□□□ -1.74
CDC42YLR229C YNL018CP53976 612 aa4.18□□□□□ -1.74
CDC42YLR229C NUP116Q02630 1113 aa4.18□□□□□ -1.74
CDC42YLR229C EFR3Q03653 782 aaKnown RBP4.18□□□□□ -1.74
CDC42YLR229C NSE5Q03718 556 aa4.18□□□□□ -1.74
CDC42YLR229C AIM36Q03798 255 aa4.18□□□□□ -1.74
CDC42YLR229C VBA4Q04602 768 aaKnown RBP4.18□□□□□ -1.74
CDC42YLR229C RNH1Q04740 348 aa4.18□□□□□ -1.74
CDC42YLR229C CIA1Q05583 330 aa4.18□□□□□ -1.74
CDC42YLR229C ASR1Q06834 288 aa4.18□□□□□ -1.74
CDC42YLR229C MFG1Q07684 458 aa4.18□□□□□ -1.74
CDC42YLR229C THP1Q08231 455 aa4.18□□□□□ -1.74
CDC42YLR229C YOL159CQ08300 171 aa4.18□□□□□ -1.74
CDC42YLR229C CLP1Q08685 445 aaPredicted RBP4.18□□□□□ -1.74
CDC42YLR229C YPL199CQ08954 240 aa4.18□□□□□ -1.74
CDC42YLR229C SLF1Q12034 447 aaKnown RBP4.18□□□□□ -1.74
CDC42YLR229C ACF2Q12168 779 aa4.18□□□□□ -1.74
CDC42YLR229C YGK3Q12222 375 aaPredicted RBP4.18□□□□□ -1.74
CDC42YLR229C PST2Q12335 198 aaKnown RBP4.18□□□□□ -1.74
CDC42YLR229C GTT2Q12390 233 aa4.18□□□□□ -1.74
CDC42YLR229C TMA7Q3E764 64 aaKnown RBP4.18□□□□□ -1.74
CDC42YLR229C SUS1Q6WNK7 96 aa4.18□□□□□ -1.74
CDC42YLR229C IPP1P00817 287 aaKnown RBP4.17□□□□□ -1.74
CDC42YLR229C ADE5,7P07244 802 aaKnown RBP4.17□□□□□ -1.74
CDC42YLR229C REV1P12689 985 aa4.17□□□□□ -1.74
CDC42YLR229C YAP1P19880 650 aaKnown RBP4.17□□□□□ -1.74
CDC42YLR229C OCA4P25366 362 aa4.17□□□□□ -1.74
CDC42YLR229C HYM1P32464 399 aa4.17□□□□□ -1.74
CDC42YLR229C PPQ1P32945 549 aa4.17□□□□□ -1.74
CDC42YLR229C PXA2P34230 853 aa4.17□□□□□ -1.74
CDC42YLR229C TEF4P36008 412 aaKnown RBP4.17□□□□□ -1.74
CDC42YLR229C STP2P38704 541 aa4.17□□□□□ -1.74
CDC42YLR229C LRP1P38801 184 aaKnown RBP4.17□□□□□ -1.74
CDC42YLR229C RGI1P40043 161 aaPredicted RBP4.17□□□□□ -1.74
CDC42YLR229C UTP18P40362 594 aaPredicted RBP4.17□□□□□ -1.74
CDC42YLR229C GAT1P43574 510 aa4.17□□□□□ -1.74
CDC42YLR229C MDV1P47025 714 aa4.17□□□□□ -1.74
CDC42YLR229C ECM27P47144 725 aa4.17□□□□□ -1.74
CDC42YLR229C YPT32P51996 222 aaKnown RBP4.17□□□□□ -1.74
CDC42YLR229C FRE4P53746 719 aa4.17□□□□□ -1.74
CDC42YLR229C YNL034WP53963 612 aa4.17□□□□□ -1.74
CDC42YLR229C SPR6Q01684 191 aa4.17□□□□□ -1.74
CDC42YLR229C IRC15Q02733 499 aa4.17□□□□□ -1.74
CDC42YLR229C LEE1Q02799 301 aaKnown RBP4.17□□□□□ -1.74
CDC42YLR229C YMR178WQ03219 274 aaKnown RBP4.17□□□□□ -1.74
CDC42YLR229C VHS1Q03785 461 aa4.17□□□□□ -1.74
CDC42YLR229C YDR124WQ04608 324 aa4.17□□□□□ -1.74
CDC42YLR229C SAM4Q08985 325 aaKnown RBP4.17□□□□□ -1.74
CDC42YLR229C PER33Q12144 273 aa4.17□□□□□ -1.74
CDC42YLR229C JLP1Q12358 412 aa4.17□□□□□ -1.74
CDC42YLR229C PNS1Q12412 539 aa4.17□□□□□ -1.74
CDC42YLR229C FMP16Q12497 93 aa4.17□□□□□ -1.74
CDC42YLR229C PHO5P00635 467 aa4.16□□□□□ -1.74
CDC42YLR229C RAS2P01120 322 aaKnown RBP4.16□□□□□ -1.74
CDC42YLR229C ATP4P05626 244 aa4.16□□□□□ -1.74
CDC42YLR229C CDC21P06785 304 aa4.16□□□□□ -1.74
CDC42YLR229C YAR066WP0CX18 203 aa4.16□□□□□ -1.74
CDC42YLR229C YHR214WP0CX19 203 aa4.16□□□□□ -1.74
CDC42YLR229C MET8P15807 274 aa4.16□□□□□ -1.74
CDC42YLR229C MDH1P17505 334 aaKnown RBP RIP-Chip data4.16□□□□□ -1.74not detected
CDC42YLR229C PHO84P25297 587 aaKnown RBP4.16□□□□□ -1.74
CDC42YLR229C ERG4P25340 473 aa4.16□□□□□ -1.74
CDC42YLR229C IMG2P25642 146 aaPredicted RBP4.16□□□□□ -1.74
CDC42YLR229C PET127P32606 800 aa4.16□□□□□ -1.74
CDC42YLR229C PDR3P33200 976 aa4.16□□□□□ -1.74
CDC42YLR229C SDH3P33421 198 aa4.16□□□□□ -1.74
CDC42YLR229C HIS7P33734 552 aaKnown RBP4.16□□□□□ -1.74
CDC42YLR229C YPT52P36018 234 aaKnown RBP4.16□□□□□ -1.74
CDC42YLR229C RCK1P38622 512 aa4.16□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms