RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W PEX32P38292 413 aa2.29□□□□□ -2.04
HRD3YLR207W INM1P38710 295 aa2.29□□□□□ -2.04
HRD3YLR207W TVP23P38962 199 aa2.29□□□□□ -2.04
HRD3YLR207W FIS1P40515 155 aa2.29□□□□□ -2.04
HRD3YLR207W AZR1P50080 613 aa2.29□□□□□ -2.04
HRD3YLR207W RTT102P53330 157 aa2.29□□□□□ -2.04
HRD3YLR207W YNL134CP53912 376 aaKnown RBP2.29□□□□□ -2.04
HRD3YLR207W STD1Q02794 444 aa2.29□□□□□ -2.04
HRD3YLR207W HSP31Q04432 237 aa2.29□□□□□ -2.04
HRD3YLR207W GPN3Q06543 272 aa2.29□□□□□ -2.04
HRD3YLR207W SHS1Q07657 551 aa2.29□□□□□ -2.04
HRD3YLR207W SMC5Q08204 1093 aa2.29□□□□□ -2.04
HRD3YLR207W PLP2Q12017 286 aa2.29□□□□□ -2.04
HRD3YLR207W SPO24Q3E752 67 aa2.29□□□□□ -2.04
HRD3YLR207W MAK32P23060 363 aa2.28□□□□□ -2.04
HRD3YLR207W YCL068CP25593 260 aa2.28□□□□□ -2.04
HRD3YLR207W HOT13P36078 116 aa2.28□□□□□ -2.04
HRD3YLR207W DRE2P36152 348 aa2.28□□□□□ -2.04
HRD3YLR207W YHR045WP38775 560 aa2.28□□□□□ -2.04
HRD3YLR207W PET100P38958 111 aa2.28□□□□□ -2.04
HRD3YLR207W SAS2P40963 338 aa2.28□□□□□ -2.04
HRD3YLR207W CDC1P40986 491 aa2.28□□□□□ -2.04
HRD3YLR207W LOC1P43586 204 aaPredicted RBP2.28□□□□□ -2.04
HRD3YLR207W LYS20P48570 428 aaKnown RBP2.28□□□□□ -2.04
HRD3YLR207W PET117Q02771 107 aa2.28□□□□□ -2.04
HRD3YLR207W GIP3Q03016 1276 aa2.28□□□□□ -2.04
HRD3YLR207W TAF12Q03761 539 aa2.28□□□□□ -2.04
HRD3YLR207W MDM30Q05930 598 aa2.28□□□□□ -2.04
HRD3YLR207W BOP2Q06150 570 aa2.28□□□□□ -2.04
HRD3YLR207W SYO1Q07395 620 aa2.28□□□□□ -2.04
HRD3YLR207W YDL218WQ07629 317 aa2.28□□□□□ -2.04
HRD3YLR207W REX4Q08237 289 aa2.28□□□□□ -2.04
HRD3YLR207W AAD15Q08361 143 aa2.28□□□□□ -2.04
HRD3YLR207W FMP16Q12497 93 aa2.28□□□□□ -2.04
HRD3YLR207W RMD5Q12508 421 aa2.28□□□□□ -2.04
HRD3YLR207W MYO1P08964 1928 aa2.28□□□□□ -2.04
HRD3YLR207W CSF1Q12150 2958 aa2.28□□□□□ -2.04
HRD3YLR207W MES1P00958 751 aaKnown RBP2.28□□□□□ -2.04
HRD3YLR207W CHS1P08004 1131 aa2.28□□□□□ -2.04
HRD3YLR207W RPL18AP0CX49 186 aaKnown RBP2.28□□□□□ -2.04
HRD3YLR207W RPL18BP0CX50 186 aaKnown RBP2.28□□□□□ -2.04
HRD3YLR207W TYR1P20049 452 aa2.28□□□□□ -2.04
HRD3YLR207W RAD57P25301 460 aa2.28□□□□□ -2.04
HRD3YLR207W MGR1P25573 417 aa2.28□□□□□ -2.04
HRD3YLR207W CSM1P25651 190 aa2.28□□□□□ -2.04
HRD3YLR207W CIN8P27895 1000 aa2.28□□□□□ -2.04
HRD3YLR207W BMH1P29311 267 aaKnown RBP2.28□□□□□ -2.04
HRD3YLR207W APE2P32454 952 aaKnown RBP2.28□□□□□ -2.04
HRD3YLR207W CSE2P33308 149 aa2.28□□□□□ -2.04
HRD3YLR207W MSN2P33748 704 aa2.28□□□□□ -2.04
HRD3YLR207W YKL071WP36086 256 aa2.28□□□□□ -2.04
HRD3YLR207W LAG1P38703 411 aa2.28□□□□□ -2.04
HRD3YLR207W RCY1P39531 840 aa2.28□□□□□ -2.04
HRD3YLR207W YER034WP40022 185 aaKnown RBP2.28□□□□□ -2.04
HRD3YLR207W HYR1P40581 163 aaKnown RBP2.28□□□□□ -2.04
HRD3YLR207W SPG5P42933 373 aa2.28□□□□□ -2.04
HRD3YLR207W BNA6P43619 295 aa2.28□□□□□ -2.04
HRD3YLR207W PHO86P46956 311 aa2.28□□□□□ -2.04
HRD3YLR207W LOH1P47055 219 aa2.28□□□□□ -2.04
HRD3YLR207W YNL260CP53846 198 aa2.28□□□□□ -2.04
HRD3YLR207W KTR5P53966 522 aaPredicted RBP2.28□□□□□ -2.04
HRD3YLR207W YDR387CQ04162 555 aa2.28□□□□□ -2.04
HRD3YLR207W BUR2Q05949 395 aa2.28□□□□□ -2.04
HRD3YLR207W PIG1Q06216 648 aa2.28□□□□□ -2.04
HRD3YLR207W SSK1Q07084 712 aa2.28□□□□□ -2.04
HRD3YLR207W YAP7Q08182 245 aa2.28□□□□□ -2.04
HRD3YLR207W YLL056CQ12177 298 aa2.28□□□□□ -2.04
HRD3YLR207W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
HRD3YLR207W NCE102Q12207 173 aaRIP-Chip data2.28□□□□□ -2.04not detected
HRD3YLR207W YPR1Q12458 312 aa2.28□□□□□ -2.04
HRD3YLR207W RRI1Q12468 440 aa2.28□□□□□ -2.04
HRD3YLR207W YDR524C-BQ3E6R4 66 aa2.28□□□□□ -2.04
HRD3YLR207W RGS2Q99188 309 aa2.28□□□□□ -2.04
HRD3YLR207W CNA1P23287 553 aa2.27□□□□□ -2.05
HRD3YLR207W ILV6P25605 309 aaKnown RBP2.27□□□□□ -2.05
HRD3YLR207W COQ3P27680 312 aa2.27□□□□□ -2.05
HRD3YLR207W MSK1P32048 576 aa2.27□□□□□ -2.05
HRD3YLR207W MUD1P32605 298 aaKnown RBP2.27□□□□□ -2.05
HRD3YLR207W BUD2P33314 1104 aa2.27□□□□□ -2.05
HRD3YLR207W YHR177WP38867 453 aa2.27□□□□□ -2.05
HRD3YLR207W HMF1P40037 129 aaKnown RBP2.27□□□□□ -2.05
HRD3YLR207W ASI1P54074 624 aa2.27□□□□□ -2.05
HRD3YLR207W YMR102CQ03177 834 aa2.27□□□□□ -2.05
HRD3YLR207W CTL1Q03220 320 aaKnown RBP2.27□□□□□ -2.05
HRD3YLR207W ECM7Q06200 448 aa2.27□□□□□ -2.05
HRD3YLR207W CDD1Q06549 142 aa2.27□□□□□ -2.05
HRD3YLR207W IES4Q08561 116 aa2.27□□□□□ -2.05
HRD3YLR207W PFA4Q12006 378 aa2.27□□□□□ -2.05
HRD3YLR207W FAB1P34756 2278 aa2.27□□□□□ -2.05
HRD3YLR207W RAD52P06778 471 aaKnown RBP2.27□□□□□ -2.05
HRD3YLR207W PRB1P09232 635 aa2.27□□□□□ -2.05
HRD3YLR207W SEC63P14906 663 aa2.27□□□□□ -2.05
HRD3YLR207W CDC23P16522 626 aa2.27□□□□□ -2.05
HRD3YLR207W YCR016WP25617 290 aaKnown RBP2.27□□□□□ -2.05
HRD3YLR207W SNC1P31109 117 aa2.27□□□□□ -2.05
HRD3YLR207W SRB4P32569 687 aa2.27□□□□□ -2.05
HRD3YLR207W SKG6P32900 734 aaPredicted RBP2.27□□□□□ -2.05
HRD3YLR207W ECT1P33412 323 aa2.27□□□□□ -2.05
HRD3YLR207W RFT1P38206 574 aaPredicted RBP2.27□□□□□ -2.05
HRD3YLR207W MMS21P38632 267 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms