RNA–Protein interactions for RNA: YJL087C

TRL1, Transcript of tRNA ligase, yeastyeast

Gene TRL1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRL1YJL087C ISC1P40015 477 aaKnown RBP1.88□□□□□ -2.11
TRL1YJL087C CSM2P40465 213 aa1.88□□□□□ -2.11
TRL1YJL087C SDS3P40505 327 aa1.88□□□□□ -2.11
TRL1YJL087C YRB2P40517 327 aa1.88□□□□□ -2.11
TRL1YJL087C YFL040WP43562 540 aa1.88□□□□□ -2.11
TRL1YJL087C ABM1P47146 123 aa1.88□□□□□ -2.11
TRL1YJL087C TAF6P53040 516 aa1.88□□□□□ -2.11
TRL1YJL087C HXT11P54862 567 aa1.88□□□□□ -2.11
TRL1YJL087C PNG1Q02890 363 aa1.88□□□□□ -2.11
TRL1YJL087C RLI1Q03195 608 aaKnown RBP1.88□□□□□ -2.11
TRL1YJL087C YMR209CQ03648 457 aa1.88□□□□□ -2.11
TRL1YJL087C MYO5Q04439 1219 aaKnown RBP1.88□□□□□ -2.11
TRL1YJL087C IVY1Q04934 453 aa1.88□□□□□ -2.11
TRL1YJL087C RTN1Q04947 295 aaKnown RBP1.88□□□□□ -2.11
TRL1YJL087C GMC2Q06201 188 aa1.88□□□□□ -2.11
TRL1YJL087C PAM18Q07914 168 aa1.88□□□□□ -2.11
TRL1YJL087C THI20Q08224 551 aa1.88□□□□□ -2.11
TRL1YJL087C YPR1Q12458 312 aa1.88□□□□□ -2.11
TRL1YJL087C RGS2Q99188 309 aa1.88□□□□□ -2.11
TRL1YJL087C MATALPHA1P0CY06 175 aa1.88□□□□□ -2.11
TRL1YJL087C HMLALPHA1P0CY07 175 aa1.88□□□□□ -2.11
TRL1YJL087C ARF2P19146 181 aaKnown RBP1.88□□□□□ -2.11
TRL1YJL087C LSB5P25369 354 aa1.88□□□□□ -2.11
TRL1YJL087C RRT12P25381 491 aa1.88□□□□□ -2.11
TRL1YJL087C LOS1P33418 1100 aaPredicted RBP1.88□□□□□ -2.11
TRL1YJL087C RPC37P36121 282 aa1.88□□□□□ -2.11
TRL1YJL087C RIM2P38127 377 aa1.88□□□□□ -2.11
TRL1YJL087C YMR262WP38430 313 aa1.88□□□□□ -2.11
TRL1YJL087C MMS21P38632 267 aa1.88□□□□□ -2.11
TRL1YJL087C PAC2P39937 518 aa1.88□□□□□ -2.11
TRL1YJL087C MMF1P40185 145 aaKnown RBP1.88□□□□□ -2.11
TRL1YJL087C YCH1P42937 148 aa1.88□□□□□ -2.11
TRL1YJL087C IRC7P43623 340 aa1.88□□□□□ -2.11
TRL1YJL087C PHB2P50085 310 aa1.88□□□□□ -2.11
TRL1YJL087C LST7P53237 242 aa1.88□□□□□ -2.11
TRL1YJL087C OKP1P53298 406 aa1.88□□□□□ -2.11
TRL1YJL087C YNR048WP53740 393 aa1.88□□□□□ -2.11
TRL1YJL087C COS1P53822 381 aa1.88□□□□□ -2.11
TRL1YJL087C NOP13P53883 403 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
TRL1YJL087C SAM50P53969 484 aa1.88□□□□□ -2.11
TRL1YJL087C RVB1Q03940 463 aaKnown RBP1.88□□□□□ -2.11
TRL1YJL087C GLO2Q05584 274 aa1.88□□□□□ -2.11
TRL1YJL087C BSP1Q06604 576 aa1.88□□□□□ -2.11
TRL1YJL087C GRS2Q06817 618 aa1.88□□□□□ -2.11
TRL1YJL087C REX4Q08237 289 aa1.88□□□□□ -2.11
TRL1YJL087C PFA4Q12006 378 aa1.88□□□□□ -2.11
TRL1YJL087C YOP1Q12402 180 aa1.88□□□□□ -2.11
TRL1YJL087C YBL111CQ3E7Y5 667 aa1.88□□□□□ -2.11
TRL1YJL087C EDE1P34216 1381 aa1.87□□□□□ -2.11
TRL1YJL087C ATP1P07251 545 aaKnown RBP1.87□□□□□ -2.11
TRL1YJL087C APA2P22108 325 aa1.87□□□□□ -2.11
TRL1YJL087C DCC1P25559 380 aa1.87□□□□□ -2.11
TRL1YJL087C CTS1P29029 562 aa1.87□□□□□ -2.11
TRL1YJL087C MKK1P32490 508 aa1.87□□□□□ -2.11
TRL1YJL087C GCG1P32656 232 aaKnown RBP1.87□□□□□ -2.11
TRL1YJL087C SKT5P34226 696 aa1.87□□□□□ -2.11
TRL1YJL087C APD1P38281 316 aa1.87□□□□□ -2.11
TRL1YJL087C YEL020CP39994 560 aa1.87□□□□□ -2.11
TRL1YJL087C MRX5P47007 382 aa1.87□□□□□ -2.11
TRL1YJL087C COX16P47081 118 aa1.87□□□□□ -2.11
TRL1YJL087C TRM112P53738 135 aaPredicted RBP1.87□□□□□ -2.11
TRL1YJL087C ESBP6P53918 673 aa1.87□□□□□ -2.11
TRL1YJL087C ARK1P53974 638 aa1.87□□□□□ -2.11
TRL1YJL087C SLT2Q00772 484 aa1.87□□□□□ -2.11
TRL1YJL087C CTL1Q03220 320 aaKnown RBP1.87□□□□□ -2.11
TRL1YJL087C CMS1Q07897 291 aaKnown RBP1.87□□□□□ -2.11
TRL1YJL087C PLP2Q12017 286 aa1.87□□□□□ -2.11
TRL1YJL087C ARP6Q12509 438 aa1.87□□□□□ -2.11
TRL1YJL087C DET1Q99288 334 aaKnown RBP1.87□□□□□ -2.11
TRL1YJL087C SAL1D6W196 494 aa1.86□□□□□ -2.11
TRL1YJL087C ATP6P00854 259 aa1.86□□□□□ -2.11
TRL1YJL087C ZRC1P20107 442 aa1.86□□□□□ -2.11
TRL1YJL087C RPO26P20435 155 aa1.86□□□□□ -2.11
TRL1YJL087C DAL82P21705 255 aa1.86□□□□□ -2.11
TRL1YJL087C MRPL8P22353 238 aa1.86□□□□□ -2.11
TRL1YJL087C YSR3P23501 404 aa1.86□□□□□ -2.11
TRL1YJL087C PUT3P25502 979 aaPredicted RBP1.86□□□□□ -2.11
TRL1YJL087C YCR100CP25606 316 aa1.86□□□□□ -2.11
TRL1YJL087C ACB1P31787 87 aa1.86□□□□□ -2.11
TRL1YJL087C PRO3P32263 286 aaKnown RBP1.86□□□□□ -2.11
TRL1YJL087C MNS1P32906 549 aa1.86□□□□□ -2.11
TRL1YJL087C FRE2P36033 711 aa1.86□□□□□ -2.11
TRL1YJL087C MCR1P36060 302 aaKnown RBP1.86□□□□□ -2.11
TRL1YJL087C PHD1P36093 366 aa1.86□□□□□ -2.11
TRL1YJL087C LDB7P38210 180 aa1.86□□□□□ -2.11
TRL1YJL087C DHH1P39517 506 aaKnown RBP1.86□□□□□ -2.11
TRL1YJL087C QRI1P43123 477 aaKnown RBP1.86□□□□□ -2.11
TRL1YJL087C AGP3P43548 558 aa1.86□□□□□ -2.11
TRL1YJL087C SEH1P53011 349 aaKnown RBP1.86□□□□□ -2.11
TRL1YJL087C PXR1P53335 271 aaPredicted RBP1.86□□□□□ -2.11
TRL1YJL087C ALG11P53954 548 aaKnown RBP1.86□□□□□ -2.11
TRL1YJL087C TIM44Q01852 431 aa1.86□□□□□ -2.11
TRL1YJL087C TPO3Q06451 622 aa1.86□□□□□ -2.11
TRL1YJL087C SGT1Q08446 395 aa1.86□□□□□ -2.11
TRL1YJL087C SAM4Q08985 325 aaKnown RBP1.86□□□□□ -2.11
TRL1YJL087C GET4Q12125 312 aa1.86□□□□□ -2.11
TRL1YJL087C MSH5Q12175 901 aa1.86□□□□□ -2.11
TRL1YJL087C TPK3P05986 398 aa1.86□□□□□ -2.11
TRL1YJL087C SSC1P0CS90 654 aaKnown RBP1.86□□□□□ -2.11
TRL1YJL087C YPK2P18961 677 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms