RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W REX2P54964 269 aaKnown RBP2.12□□□□□ -2.07
CIC1YHR052W NSE1Q07913 336 aa2.12□□□□□ -2.07
CIC1YHR052W YDR061WQ12298 539 aa2.12□□□□□ -2.07
CIC1YHR052W RPL12AP0CX53 165 aaKnown RBP2.11□□□□□ -2.07
CIC1YHR052W RPL12BP0CX54 165 aa2.11□□□□□ -2.07
CIC1YHR052W MAS2P11914 482 aa2.11□□□□□ -2.07
CIC1YHR052W SLM5P25345 492 aaKnown RBP2.11□□□□□ -2.07
CIC1YHR052W CHA1P25379 360 aaKnown RBP2.11□□□□□ -2.07
CIC1YHR052W TIR2P33890 251 aa2.11□□□□□ -2.07
CIC1YHR052W GEP4P38812 185 aa2.11□□□□□ -2.07
CIC1YHR052W NAB3P38996 802 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
CIC1YHR052W PEX22P39718 180 aa2.11□□□□□ -2.07
CIC1YHR052W ABM1P47146 123 aa2.11□□□□□ -2.07
CIC1YHR052W PIB2P53191 635 aa2.11□□□□□ -2.07
CIC1YHR052W YGR067CP53243 804 aa2.11□□□□□ -2.07
CIC1YHR052W PRP38Q00723 242 aaPredicted RBP2.11□□□□□ -2.07
CIC1YHR052W RMT2Q03305 412 aa2.11□□□□□ -2.07
CIC1YHR052W MSC3Q05812 728 aa2.11□□□□□ -2.07
CIC1YHR052W SFM1Q12314 213 aa2.11□□□□□ -2.07
CIC1YHR052W NRP1P32770 719 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
CIC1YHR052W TOA1P32773 286 aa2.1□□□□□ -2.07
CIC1YHR052W TOA2P32774 122 aa2.1□□□□□ -2.07
CIC1YHR052W PDC2P32896 925 aa2.1□□□□□ -2.07
CIC1YHR052W CYM1P32898 989 aa2.1□□□□□ -2.07
CIC1YHR052W QDR3P38227 689 aa2.1□□□□□ -2.07
CIC1YHR052W WSC4P38739 605 aa2.1□□□□□ -2.07
CIC1YHR052W FHL1P39521 936 aa2.1□□□□□ -2.07
CIC1YHR052W ZIM17P42844 174 aa2.1□□□□□ -2.07
CIC1YHR052W URC2Q04411 772 aa2.1□□□□□ -2.07
CIC1YHR052W ASA1Q06822 443 aa2.1□□□□□ -2.07
CIC1YHR052W YOR376WQ08900 122 aa2.1□□□□□ -2.07
CIC1YHR052W HMS1Q12398 434 aa2.1□□□□□ -2.07
CIC1YHR052W MEX67Q99257 599 aaKnown RBP2.1□□□□□ -2.07
CIC1YHR052W RPS18AP0CX55 146 aaKnown RBP2.09□□□□□ -2.07
CIC1YHR052W RPS18BP0CX56 146 aaPredicted RBP2.09□□□□□ -2.07
CIC1YHR052W ARF1P11076 181 aaKnown RBP2.09□□□□□ -2.07
CIC1YHR052W PHO91P27514 894 aa2.09□□□□□ -2.07
CIC1YHR052W DOA1P36037 715 aa2.09□□□□□ -2.07
CIC1YHR052W FRT2P39734 528 aa2.09□□□□□ -2.07
CIC1YHR052W YDR115WQ04598 105 aa2.09□□□□□ -2.07
CIC1YHR052W ECM7Q06200 448 aa2.09□□□□□ -2.07
CIC1YHR052W YLR177WQ06251 628 aa2.09□□□□□ -2.07
CIC1YHR052W UAF30Q08747 228 aa2.09□□□□□ -2.07
CIC1YHR052W YOL085CQ99345 113 aa2.09□□□□□ -2.07
CIC1YHR052W ASP3-2P0CX77 362 aa2.08□□□□□ -2.08
CIC1YHR052W ASP3-3P0CX78 362 aa2.08□□□□□ -2.08
CIC1YHR052W ASP3-4P0CX79 362 aa2.08□□□□□ -2.08
CIC1YHR052W ASP3-1P0CZ17 362 aa2.08□□□□□ -2.08
CIC1YHR052W MSP1P28737 362 aa2.08□□□□□ -2.08
CIC1YHR052W IME2P32581 645 aa2.08□□□□□ -2.08
CIC1YHR052W ANP1P32629 500 aa2.08□□□□□ -2.08
CIC1YHR052W YSC83P32792 385 aa2.08□□□□□ -2.08
CIC1YHR052W PRY2P36110 329 aa2.08□□□□□ -2.08
CIC1YHR052W PAC11P40960 533 aa2.08□□□□□ -2.08
CIC1YHR052W COQ5P49017 307 aa2.08□□□□□ -2.08
CIC1YHR052W ROG1P53118 685 aa2.08□□□□□ -2.08
CIC1YHR052W YGR111WP53265 400 aa2.08□□□□□ -2.08
CIC1YHR052W HIF1Q12373 385 aa2.08□□□□□ -2.08
CIC1YHR052W MDH1P17505 334 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
CIC1YHR052W ECM34P38728 170 aa2.07□□□□□ -2.08
CIC1YHR052W CIN2P46670 268 aa2.07□□□□□ -2.08
CIC1YHR052W ASN2P49090 572 aaKnown RBP2.07□□□□□ -2.08
CIC1YHR052W YPR195CQ06594 109 aa2.07□□□□□ -2.08
CIC1YHR052W NOP6Q07623 225 aaKnown RBP2.07□□□□□ -2.08
CIC1YHR052W SRO7Q12038 1033 aa2.07□□□□□ -2.08
CIC1YHR052W LTV1P34078 463 aa2.06□□□□□ -2.08
CIC1YHR052W SMP1P38128 452 aa2.06□□□□□ -2.08
CIC1YHR052W SEC27P41811 889 aaKnown RBP2.06□□□□□ -2.08
CIC1YHR052W VEL1P53058 206 aa2.06□□□□□ -2.08
CIC1YHR052W SPC19Q03954 165 aa2.06□□□□□ -2.08
CIC1YHR052W NDL1Q06568 189 aa2.06□□□□□ -2.08
CIC1YHR052W LDB17Q12342 491 aa2.06□□□□□ -2.08
CIC1YHR052W RNA1P11745 407 aaKnown RBP2.05□□□□□ -2.08
CIC1YHR052W UNG1P12887 359 aa2.05□□□□□ -2.08
CIC1YHR052W EPT1P22140 391 aa2.05□□□□□ -2.08
CIC1YHR052W LDS1P31379 325 aa2.05□□□□□ -2.08
CIC1YHR052W AGA2P32781 87 aa2.05□□□□□ -2.08
CIC1YHR052W CPR7P47103 393 aa2.05□□□□□ -2.08
CIC1YHR052W BIO3P50277 480 aa2.05□□□□□ -2.08
CIC1YHR052W RNH201P53942 307 aa2.05□□□□□ -2.08
CIC1YHR052W DIA1P54005 336 aa2.05□□□□□ -2.08
CIC1YHR052W YDR541CQ03049 344 aa2.05□□□□□ -2.08
CIC1YHR052W ERO1Q03103 563 aa2.05□□□□□ -2.08
CIC1YHR052W YMR010WQ03687 405 aa2.05□□□□□ -2.08
CIC1YHR052W LDS2Q08218 356 aa2.05□□□□□ -2.08
CIC1YHR052W DCI1Q08558 271 aa2.05□□□□□ -2.08
CIC1YHR052W ATP16Q12165 160 aa2.05□□□□□ -2.08
CIC1YHR052W ISA2Q12425 185 aa2.05□□□□□ -2.08
CIC1YHR052W PDE2P06776 526 aa2.04□□□□□ -2.08
CIC1YHR052W RPL16AP26784 199 aaKnown RBP2.04□□□□□ -2.08
CIC1YHR052W DBF4P32325 704 aa2.04□□□□□ -2.08
CIC1YHR052W YBR241CP38142 488 aa2.04□□□□□ -2.08
CIC1YHR052W SHE1P38200 338 aa2.04□□□□□ -2.08
CIC1YHR052W SHE3P38272 425 aaKnown RBP2.04□□□□□ -2.08
CIC1YHR052W RCK2P38623 610 aa2.04□□□□□ -2.08
CIC1YHR052W CTK3P46963 296 aaPredicted RBP2.04□□□□□ -2.08
CIC1YHR052W RTT102P53330 157 aa2.04□□□□□ -2.08
CIC1YHR052W FSH2Q05015 223 aa2.04□□□□□ -2.08
CIC1YHR052W AAD15Q08361 143 aa2.04□□□□□ -2.08
CIC1YHR052W DDC1Q08949 612 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms