RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C AGA2P32781 87 aa1.45□□□□□ -2.18
RTR1YER139C SKT5P34226 696 aa1.45□□□□□ -2.18
RTR1YER139C GEP4P38812 185 aa1.45□□□□□ -2.18
RTR1YER139C WSS1P38838 269 aa1.45□□□□□ -2.18
RTR1YER139C SPO73P40031 143 aa1.45□□□□□ -2.18
RTR1YER139C YML6P51998 286 aa1.45□□□□□ -2.18
RTR1YER139C SXM1Q04175 944 aaKnown RBP1.45□□□□□ -2.18
RTR1YER139C HRT1Q08273 121 aa1.45□□□□□ -2.18
RTR1YER139C FCY22Q12119 530 aa1.45□□□□□ -2.18
RTR1YER139C RPN5Q12250 445 aaKnown RBP1.45□□□□□ -2.18
RTR1YER139C YOP1Q12402 180 aa1.45□□□□□ -2.18
RTR1YER139C PAB1P04147 577 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
RTR1YER139C RPL1AP0CX43 217 aaKnown RBP1.44□□□□□ -2.18
RTR1YER139C RPL1BP0CX44 217 aaKnown RBP1.44□□□□□ -2.18
RTR1YER139C RPL12AP0CX53 165 aaKnown RBP1.44□□□□□ -2.18
RTR1YER139C RPL12BP0CX54 165 aa1.44□□□□□ -2.18
RTR1YER139C ARF1P11076 181 aaKnown RBP1.44□□□□□ -2.18
RTR1YER139C TIR2P33890 251 aa1.44□□□□□ -2.18
RTR1YER139C MCR1P36060 302 aaKnown RBP1.44□□□□□ -2.18
RTR1YER139C ANR2P36090 516 aaPredicted RBP1.44□□□□□ -2.18
RTR1YER139C GPX2P38143 162 aa1.44□□□□□ -2.18
RTR1YER139C KAP104P38217 918 aaKnown RBP1.44□□□□□ -2.18
RTR1YER139C PFS1P38872 237 aa1.44□□□□□ -2.18
RTR1YER139C MNL1P38888 796 aa1.44□□□□□ -2.18
RTR1YER139C PTI1P39927 425 aaPredicted RBP1.44□□□□□ -2.18
RTR1YER139C GDI1P39958 451 aaKnown RBP1.44□□□□□ -2.18
RTR1YER139C EFM4P40516 257 aa1.44□□□□□ -2.18
RTR1YER139C PAC11P40960 533 aa1.44□□□□□ -2.18
RTR1YER139C LCB2P40970 561 aa1.44□□□□□ -2.18
RTR1YER139C YJL055WP47044 245 aa1.44□□□□□ -2.18
RTR1YER139C PMT5P52867 743 aa1.44□□□□□ -2.18
RTR1YER139C MEH1Q02205 184 aa1.44□□□□□ -2.18
RTR1YER139C ASA1Q06822 443 aa1.44□□□□□ -2.18
RTR1YER139C ERP4Q12450 207 aa1.44□□□□□ -2.18
RTR1YER139C PUT4P15380 627 aa1.43□□□□□ -2.18
RTR1YER139C WSC4P38739 605 aa1.43□□□□□ -2.18
RTR1YER139C FRT2P39734 528 aa1.43□□□□□ -2.18
RTR1YER139C TOS2P50078 622 aa1.43□□□□□ -2.18
RTR1YER139C RSC1P53236 928 aa1.43□□□□□ -2.18
RTR1YER139C RTT102P53330 157 aa1.43□□□□□ -2.18
RTR1YER139C YDR541CQ03049 344 aa1.43□□□□□ -2.18
RTR1YER139C ERO1Q03103 563 aa1.43□□□□□ -2.18
RTR1YER139C YMR010WQ03687 405 aa1.43□□□□□ -2.18
RTR1YER139C URC2Q04411 772 aa1.43□□□□□ -2.18
RTR1YER139C MFG1Q07684 458 aa1.43□□□□□ -2.18
RTR1YER139C LDS2Q08218 356 aa1.43□□□□□ -2.18
RTR1YER139C YDL199CQ12407 687 aa1.43□□□□□ -2.18
RTR1YER139C PAR32Q12515 295 aaKnown RBP1.43□□□□□ -2.18
RTR1YER139C ZRC1P20107 442 aa1.42□□□□□ -2.18
RTR1YER139C ECT1P33412 323 aa1.42□□□□□ -2.18
RTR1YER139C SPP381P38282 291 aaPredicted RBP1.42□□□□□ -2.18
RTR1YER139C IGD1P43598 195 aa1.42□□□□□ -2.18
RTR1YER139C AIP1P46680 615 aaKnown RBP1.42□□□□□ -2.18
RTR1YER139C RRN9P53437 365 aa1.42□□□□□ -2.18
RTR1YER139C VPS9P54787 451 aa1.42□□□□□ -2.18
RTR1YER139C SKI8Q02793 397 aaPredicted RBP1.42□□□□□ -2.18
RTR1YER139C PRP3Q03338 469 aaPredicted RBP1.42□□□□□ -2.18
RTR1YER139C NDL1Q06568 189 aa1.42□□□□□ -2.18
RTR1YER139C YDL114WQ07530 308 aa1.42□□□□□ -2.18
RTR1YER139C PCL9Q12477 304 aa1.42□□□□□ -2.18
RTR1YER139C RPS18AP0CX55 146 aaKnown RBP1.41□□□□□ -2.18
RTR1YER139C RPS18BP0CX56 146 aaPredicted RBP1.41□□□□□ -2.18
RTR1YER139C DEP1P31385 405 aa1.41□□□□□ -2.18
RTR1YER139C MDL1P33310 695 aa1.41□□□□□ -2.18
RTR1YER139C SPO23P33757 523 aa1.41□□□□□ -2.18
RTR1YER139C PEX5P35056 612 aa1.41□□□□□ -2.18
RTR1YER139C LRP1P38801 184 aaKnown RBP1.41□□□□□ -2.18
RTR1YER139C CHL4P38907 458 aa1.41□□□□□ -2.18
RTR1YER139C SEC27P41811 889 aaKnown RBP1.41□□□□□ -2.18
RTR1YER139C ASN2P49090 572 aaKnown RBP1.41□□□□□ -2.18
RTR1YER139C REX2P54964 269 aaKnown RBP1.41□□□□□ -2.18
RTR1YER139C IPK1Q06667 281 aa1.41□□□□□ -2.18
RTR1YER139C AAD15Q08361 143 aa1.41□□□□□ -2.18
RTR1YER139C HMS1Q12398 434 aa1.41□□□□□ -2.18
RTR1YER139C MEX67Q99257 599 aaKnown RBP1.41□□□□□ -2.18
RTR1YER139C RNA1P11745 407 aaKnown RBP1.4□□□□□ -2.19
RTR1YER139C CMK2P22517 447 aa1.4□□□□□ -2.19
RTR1YER139C GIT1P25346 518 aa1.4□□□□□ -2.19
RTR1YER139C RRP7P25368 297 aaPredicted RBP1.4□□□□□ -2.19
RTR1YER139C FUN26P31381 517 aa1.4□□□□□ -2.19
RTR1YER139C TOA2P32774 122 aa1.4□□□□□ -2.19
RTR1YER139C BLI1P35727 113 aa1.4□□□□□ -2.19
RTR1YER139C SOL2P37262 315 aa1.4□□□□□ -2.19
RTR1YER139C YHR177WP38867 453 aa1.4□□□□□ -2.19
RTR1YER139C EPL1P43572 832 aa1.4□□□□□ -2.19
RTR1YER139C ABM1P47146 123 aa1.4□□□□□ -2.19
RTR1YER139C TRF5P48561 642 aaKnown RBP1.4□□□□□ -2.19
RTR1YER139C YHC1Q05900 231 aaKnown RBP1.4□□□□□ -2.19
RTR1YER139C YOR338WQ99326 363 aa1.4□□□□□ -2.19
RTR1YER139C STE7P06784 515 aa1.39□□□□□ -2.19
RTR1YER139C MRPL8P22353 238 aa1.39□□□□□ -2.19
RTR1YER139C LSM12P38828 187 aaKnown RBP1.39□□□□□ -2.19
RTR1YER139C MLH1P38920 769 aa1.39□□□□□ -2.19
RTR1YER139C CIN2P46670 268 aa1.39□□□□□ -2.19
RTR1YER139C RPL21AQ02753 160 aaKnown RBP1.39□□□□□ -2.19
RTR1YER139C ENT5Q03769 411 aaKnown RBP1.39□□□□□ -2.19
RTR1YER139C FSH2Q05015 223 aa1.39□□□□□ -2.19
RTR1YER139C MSC3Q05812 728 aa1.39□□□□□ -2.19
RTR1YER139C YLR177WQ06251 628 aa1.39□□□□□ -2.19
RTR1YER139C GAT3Q07928 141 aa1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms