RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C GIS3Q12418 502 aa1.65□□□□□ -2.15
MSH6YDR097C PAB1P04147 577 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
MSH6YDR097C RAD3P06839 778 aa1.64□□□□□ -2.15
MSH6YDR097C GDH1P07262 454 aaKnown RBP1.64□□□□□ -2.15
MSH6YDR097C ATR1P13090 542 aa1.64□□□□□ -2.15
MSH6YDR097C PRP16P15938 1071 aaPredicted RBP1.64□□□□□ -2.15
MSH6YDR097C SLM5P25345 492 aaKnown RBP1.64□□□□□ -2.15
MSH6YDR097C SMC2P38989 1170 aaKnown RBP1.64□□□□□ -2.15
MSH6YDR097C DSE1P40077 573 aa1.64□□□□□ -2.15
MSH6YDR097C AGX1P43567 385 aa1.64□□□□□ -2.15
MSH6YDR097C RPA34P47006 233 aaPredicted RBP1.64□□□□□ -2.15
MSH6YDR097C ASN2P49090 572 aaKnown RBP1.64□□□□□ -2.15
MSH6YDR097C PMT5P52867 743 aa1.64□□□□□ -2.15
MSH6YDR097C ODC1Q03028 310 aa1.64□□□□□ -2.15
MSH6YDR097C UBX2Q04228 584 aa1.64□□□□□ -2.15
MSH6YDR097C ECI1Q05871 280 aa1.64□□□□□ -2.15
MSH6YDR097C BOP2Q06150 570 aa1.64□□□□□ -2.15
MSH6YDR097C YPR172WQ06608 200 aa1.64□□□□□ -2.15
MSH6YDR097C YDL218WQ07629 317 aa1.64□□□□□ -2.15
MSH6YDR097C YPR022CQ12139 1133 aa1.64□□□□□ -2.15
MSH6YDR097C TPT1Q12272 230 aaKnown RBP1.64□□□□□ -2.15
MSH6YDR097C ORT1Q12375 292 aa1.64□□□□□ -2.15
MSH6YDR097C CEX1Q12453 761 aa1.64□□□□□ -2.15
MSH6YDR097C COX2P00410 251 aa1.64□□□□□ -2.15
MSH6YDR097C HEM1P09950 548 aaPredicted RBP1.64□□□□□ -2.15
MSH6YDR097C GCD2P12754 651 aaPredicted RBP1.64□□□□□ -2.15
MSH6YDR097C DMC1P25453 334 aa1.64□□□□□ -2.15
MSH6YDR097C YCL068CP25593 260 aa1.64□□□□□ -2.15
MSH6YDR097C DPH5P32469 300 aaPredicted RBP1.64□□□□□ -2.15
MSH6YDR097C YBR137WP38276 179 aa1.64□□□□□ -2.15
MSH6YDR097C BZZ1P38822 633 aa1.64□□□□□ -2.15
MSH6YDR097C MST28P39552 234 aa1.64□□□□□ -2.15
MSH6YDR097C REE1P40893 198 aa1.64□□□□□ -2.15
MSH6YDR097C MIC19P43594 170 aa1.64□□□□□ -2.15
MSH6YDR097C TAX4P47030 604 aa1.64□□□□□ -2.15
MSH6YDR097C YJR079WP47126 109 aa1.64□□□□□ -2.15
MSH6YDR097C TAF6P53040 516 aa1.64□□□□□ -2.15
MSH6YDR097C SHE10P53075 577 aa1.64□□□□□ -2.15
MSH6YDR097C YGL185CP53100 379 aa1.64□□□□□ -2.15
MSH6YDR097C PCP1P53259 346 aa1.64□□□□□ -2.15
MSH6YDR097C GND2P53319 492 aa1.64□□□□□ -2.15
MSH6YDR097C YMR310CQ04867 317 aaPredicted RBP1.64□□□□□ -2.15
MSH6YDR097C SMC5Q08204 1093 aa1.64□□□□□ -2.15
MSH6YDR097C UBR2Q07963 1872 aa1.64□□□□□ -2.15
MSH6YDR097C SAC3P46674 1301 aa1.64□□□□□ -2.15
MSH6YDR097C PGK1P00560 416 aaKnown RBP1.64□□□□□ -2.15
MSH6YDR097C HPR1P17629 752 aaKnown RBP1.64□□□□□ -2.15
MSH6YDR097C PHO13P19881 312 aa1.64□□□□□ -2.15
MSH6YDR097C SEC14P24280 304 aaKnown RBP1.64□□□□□ -2.15
MSH6YDR097C RAD57P25301 460 aa1.64□□□□□ -2.15
MSH6YDR097C PPZ1P26570 692 aa1.64□□□□□ -2.15
MSH6YDR097C COQ3P27680 312 aa1.64□□□□□ -2.15
MSH6YDR097C APE2P32454 952 aaKnown RBP1.64□□□□□ -2.15
MSH6YDR097C ECM15P35195 104 aa1.64□□□□□ -2.15
MSH6YDR097C RPC25P35718 212 aa1.64□□□□□ -2.15
MSH6YDR097C YMR262WP38430 313 aa1.64□□□□□ -2.15
MSH6YDR097C YHR177WP38867 453 aa1.64□□□□□ -2.15
MSH6YDR097C CCT4P39078 528 aaKnown RBP1.64□□□□□ -2.15
MSH6YDR097C YER079WP40052 210 aaKnown RBP1.64□□□□□ -2.15
MSH6YDR097C JLP2P40206 208 aa1.64□□□□□ -2.15
MSH6YDR097C FMP33P46998 180 aa1.64□□□□□ -2.15
MSH6YDR097C GTO1P48239 356 aa1.64□□□□□ -2.15
MSH6YDR097C MPP6P53725 186 aaPredicted RBP1.64□□□□□ -2.15
MSH6YDR097C MRP51Q02950 344 aa1.64□□□□□ -2.15
MSH6YDR097C VAC14Q06708 880 aa1.64□□□□□ -2.15
MSH6YDR097C ATP6P00854 259 aa1.63□□□□□ -2.15
MSH6YDR097C FUN19P28003 413 aaPredicted RBP1.63□□□□□ -2.15
MSH6YDR097C SIP2P34164 415 aaKnown RBP1.63□□□□□ -2.15
MSH6YDR097C FAA2P39518 744 aa1.63□□□□□ -2.15
MSH6YDR097C ISC1P40015 477 aaKnown RBP1.63□□□□□ -2.15
MSH6YDR097C RTS2P40962 232 aa1.63□□□□□ -2.15
MSH6YDR097C YJL118WP47022 219 aa1.63□□□□□ -2.15
MSH6YDR097C AVT1P47082 602 aa1.63□□□□□ -2.15
MSH6YDR097C KEL2P50090 882 aa1.63□□□□□ -2.15
MSH6YDR097C TRM44Q02648 567 aaKnown RBP1.63□□□□□ -2.15
MSH6YDR097C YLR297WQ05899 129 aa1.63□□□□□ -2.15
MSH6YDR097C ORM2Q06144 216 aa1.63□□□□□ -2.15
MSH6YDR097C TY3A-GQ12173 290 aa1.63□□□□□ -2.15
MSH6YDR097C TY3A-IQ99219 290 aa1.63□□□□□ -2.15
MSH6YDR097C MEX67Q99257 599 aaKnown RBP1.63□□□□□ -2.15
MSH6YDR097C DST1P07273 309 aa1.63□□□□□ -2.15
MSH6YDR097C CDC43P18898 376 aa1.63□□□□□ -2.15
MSH6YDR097C MEK1P24719 497 aaPredicted RBP1.63□□□□□ -2.15
MSH6YDR097C YCR022CP25620 114 aa1.63□□□□□ -2.15
MSH6YDR097C ERG9P29704 444 aa1.63□□□□□ -2.15
MSH6YDR097C BUD2P33314 1104 aa1.63□□□□□ -2.15
MSH6YDR097C YBR056WP38081 501 aa1.63□□□□□ -2.15
MSH6YDR097C QDR3P38227 689 aa1.63□□□□□ -2.15
MSH6YDR097C MMS21P38632 267 aa1.63□□□□□ -2.15
MSH6YDR097C DHH1P39517 506 aaKnown RBP1.63□□□□□ -2.15
MSH6YDR097C TIS11P47977 285 aa1.63□□□□□ -2.15
MSH6YDR097C YGR117CP53270 476 aa1.63□□□□□ -2.15
MSH6YDR097C EGD1Q02642 157 aaKnown RBP1.63□□□□□ -2.15
MSH6YDR097C YDR387CQ04162 555 aa1.63□□□□□ -2.15
MSH6YDR097C APC4Q04601 652 aa1.63□□□□□ -2.15
MSH6YDR097C YLR281CQ05863 155 aa1.63□□□□□ -2.15
MSH6YDR097C DIC1Q06143 298 aa1.63□□□□□ -2.15
MSH6YDR097C PDR8Q06149 701 aa1.63□□□□□ -2.15
MSH6YDR097C YLR177WQ06251 628 aa1.63□□□□□ -2.15
MSH6YDR097C CMS1Q07897 291 aaKnown RBP1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms