RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W CWH43P25618 953 aa1.56□□□□□ -2.16
TRM3YDL112W YCR090CP25654 182 aaKnown RBP1.56□□□□□ -2.16
TRM3YDL112W NRP1P32770 719 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
TRM3YDL112W MAL32P38158 584 aa1.56□□□□□ -2.16
TRM3YDL112W INM1P38710 295 aa1.56□□□□□ -2.16
TRM3YDL112W CAJ1P39101 391 aa1.56□□□□□ -2.16
TRM3YDL112W BAP3P41815 604 aa1.56□□□□□ -2.16
TRM3YDL112W TRM9P49957 279 aa1.56□□□□□ -2.16
TRM3YDL112W SDT1P53078 280 aa1.56□□□□□ -2.16
TRM3YDL112W YNL260CP53846 198 aa1.56□□□□□ -2.16
TRM3YDL112W SLM2P53955 656 aa1.56□□□□□ -2.16
TRM3YDL112W YDR541CQ03049 344 aa1.56□□□□□ -2.16
TRM3YDL112W GOT1Q03554 138 aa1.56□□□□□ -2.16
TRM3YDL112W YDR415CQ04033 374 aaPredicted RBP1.56□□□□□ -2.16
TRM3YDL112W HRI1Q05905 244 aaKnown RBP1.56□□□□□ -2.16
TRM3YDL112W ADE13Q05911 482 aaKnown RBP1.56□□□□□ -2.16
TRM3YDL112W YOL159CQ08300 171 aa1.56□□□□□ -2.16
TRM3YDL112W HNT3Q08702 217 aa1.56□□□□□ -2.16
TRM3YDL112W RCN2Q12044 265 aa1.56□□□□□ -2.16
TRM3YDL112W CDC21P06785 304 aa1.55□□□□□ -2.16
TRM3YDL112W SEC53P07283 254 aaKnown RBP1.55□□□□□ -2.16
TRM3YDL112W NSP1P14907 823 aaKnown RBP1.55□□□□□ -2.16
TRM3YDL112W MTC7P32633 139 aa1.55□□□□□ -2.16
TRM3YDL112W YEL057CP39983 233 aa1.55□□□□□ -2.16
TRM3YDL112W MIT1P40002 666 aa1.55□□□□□ -2.16
TRM3YDL112W COA1P40452 197 aa1.55□□□□□ -2.16
TRM3YDL112W DJP1P40564 432 aa1.55□□□□□ -2.16
TRM3YDL112W INA22P40576 216 aa1.55□□□□□ -2.16
TRM3YDL112W ARC1P46672 376 aaKnown RBP1.55□□□□□ -2.16
TRM3YDL112W AAD10P47182 288 aa1.55□□□□□ -2.16
TRM3YDL112W TIS11P47977 285 aa1.55□□□□□ -2.16
TRM3YDL112W ERG26P53199 349 aaKnown RBP1.55□□□□□ -2.16
TRM3YDL112W SLI1P53304 468 aa1.55□□□□□ -2.16
TRM3YDL112W YNL234WP53857 426 aa1.55□□□□□ -2.16
TRM3YDL112W YML131WQ03102 365 aa1.55□□□□□ -2.16
TRM3YDL112W ECM11Q04110 302 aa1.55□□□□□ -2.16
TRM3YDL112W GAS2Q06135 555 aa1.55□□□□□ -2.16
TRM3YDL112W MMT2Q08970 484 aa1.55□□□□□ -2.16
TRM3YDL112W MHT1Q12525 324 aa1.55□□□□□ -2.16
TRM3YDL112W YER145C-AA0A023PYF4 145 aa1.55□□□□□ -2.16
TRM3YDL112W NCP1P16603 691 aaKnown RBP1.55□□□□□ -2.16
TRM3YDL112W RRP43P25359 394 aaPredicted RBP1.55□□□□□ -2.16
TRM3YDL112W CHA1P25379 360 aaKnown RBP1.55□□□□□ -2.16
TRM3YDL112W YCL042WP25572 119 aa1.55□□□□□ -2.16
TRM3YDL112W POL4P25615 582 aa1.55□□□□□ -2.16
TRM3YDL112W CNE1P27825 502 aa1.55□□□□□ -2.16
TRM3YDL112W BMT2P38278 337 aa1.55□□□□□ -2.16
TRM3YDL112W YFL012WP43580 148 aa1.55□□□□□ -2.16
TRM3YDL112W APS3P47064 194 aa1.55□□□□□ -2.16
TRM3YDL112W BIO3P50277 480 aa1.55□□□□□ -2.16
TRM3YDL112W PDR16P53860 351 aaKnown RBP1.55□□□□□ -2.16
TRM3YDL112W GAS3Q03655 524 aa1.55□□□□□ -2.16
TRM3YDL112W USA1Q03714 838 aa1.55□□□□□ -2.16
TRM3YDL112W YPR174CQ06616 221 aaPredicted RBP1.55□□□□□ -2.16
TRM3YDL112W REX4Q08237 289 aa1.55□□□□□ -2.16
TRM3YDL112W RRP40Q08285 240 aaKnown RBP1.55□□□□□ -2.16
TRM3YDL112W FMP40Q08968 688 aaPredicted RBP1.55□□□□□ -2.16
TRM3YDL112W MDY2Q12285 212 aa1.55□□□□□ -2.16
TRM3YDL112W ERG27Q12452 347 aaKnown RBP1.55□□□□□ -2.16
TRM3YDL112W RGS2Q99188 309 aa1.55□□□□□ -2.16
TRM3YDL112W COR1P07256 457 aa1.55□□□□□ -2.16
TRM3YDL112W RAP1P11938 827 aa1.55□□□□□ -2.16
TRM3YDL112W CBF1P17106 351 aa1.55□□□□□ -2.16
TRM3YDL112W APN1P22936 367 aa1.55□□□□□ -2.16
TRM3YDL112W MGT1P26188 188 aa1.55□□□□□ -2.16
TRM3YDL112W PHA2P32452 334 aa1.55□□□□□ -2.16
TRM3YDL112W SPO23P33757 523 aa1.55□□□□□ -2.16
TRM3YDL112W FRE2P36033 711 aa1.55□□□□□ -2.16
TRM3YDL112W YCR087C-AP37263 153 aa1.55□□□□□ -2.16
TRM3YDL112W YHL037CP38733 133 aa1.55□□□□□ -2.16
TRM3YDL112W SPC97P38863 823 aa1.55□□□□□ -2.16
TRM3YDL112W MET30P39014 640 aa1.55□□□□□ -2.16
TRM3YDL112W SEC9P40357 651 aa1.55□□□□□ -2.16
TRM3YDL112W IST1P53843 298 aaPredicted RBP1.55□□□□□ -2.16
TRM3YDL112W MTR10Q99189 972 aa1.55□□□□□ -2.16
TRM3YDL112W SSC1P0CS90 654 aaKnown RBP1.54□□□□□ -2.16
TRM3YDL112W ERD1P16151 362 aa1.54□□□□□ -2.16
TRM3YDL112W ATS1P31386 333 aa1.54□□□□□ -2.16
TRM3YDL112W COX13P32799 129 aa1.54□□□□□ -2.16
TRM3YDL112W PTM1P32857 523 aa1.54□□□□□ -2.16
TRM3YDL112W YIL166CP40445 542 aa1.54□□□□□ -2.16
TRM3YDL112W NMD5P46970 1048 aa1.54□□□□□ -2.16
TRM3YDL112W APT1P49435 187 aaKnown RBP1.54□□□□□ -2.16
TRM3YDL112W TAF6P53040 516 aa1.54□□□□□ -2.16
TRM3YDL112W ROG1P53118 685 aa1.54□□□□□ -2.16
TRM3YDL112W GOR1P53839 350 aa1.54□□□□□ -2.16
TRM3YDL112W EAF7P53911 425 aaKnown RBP1.54□□□□□ -2.16
TRM3YDL112W NUP53Q03790 475 aa1.54□□□□□ -2.16
TRM3YDL112W URH1Q04179 340 aa1.54□□□□□ -2.16
TRM3YDL112W API2Q04413 109 aa1.54□□□□□ -2.16
TRM3YDL112W YMR310CQ04867 317 aaPredicted RBP1.54□□□□□ -2.16
TRM3YDL112W RAD34Q06665 692 aa1.54□□□□□ -2.16
TRM3YDL112W YPR091CQ06833 770 aa1.54□□□□□ -2.16
TRM3YDL112W ESA1Q08649 445 aa1.54□□□□□ -2.16
TRM3YDL112W RPL15AP05748 204 aaKnown RBP1.54□□□□□ -2.16
TRM3YDL112W MRP13P12686 339 aa1.54□□□□□ -2.16
TRM3YDL112W AAC3P18238 307 aa1.54□□□□□ -2.16
TRM3YDL112W YCK1P23291 538 aa1.54□□□□□ -2.16
TRM3YDL112W SEC14P24280 304 aaKnown RBP1.54□□□□□ -2.16
TRM3YDL112W SSE1P32589 693 aaKnown RBP1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 86.4 ms