RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W HER2Q03557 464 aa2.87□□□□□ -1.95
DPB3YBR278W CUR1Q06469 252 aa2.87□□□□□ -1.95
DPB3YBR278W SHS1Q07657 551 aa2.87□□□□□ -1.95
DPB3YBR278W YRM1Q12340 786 aa2.87□□□□□ -1.95
DPB3YBR278W YER078W-AQ3E7A2 54 aa2.87□□□□□ -1.95
DPB3YBR278W RGS2Q99188 309 aa2.87□□□□□ -1.95
DPB3YBR278W RIB7P33312 244 aa2.86□□□□□ -1.95
DPB3YBR278W MRPS5P33759 307 aa2.86□□□□□ -1.95
DPB3YBR278W TIR2P33890 251 aa2.86□□□□□ -1.95
DPB3YBR278W RTC2P38279 296 aa2.86□□□□□ -1.95
DPB3YBR278W SWC5P38326 303 aa2.86□□□□□ -1.95
DPB3YBR278W END3P39013 349 aa2.86□□□□□ -1.95
DPB3YBR278W SEC27P41811 889 aaKnown RBP2.86□□□□□ -1.95
DPB3YBR278W LCB3P47013 409 aa2.86□□□□□ -1.95
DPB3YBR278W NUP116Q02630 1113 aa2.86□□□□□ -1.95
DPB3YBR278W PRM6Q04705 352 aa2.86□□□□□ -1.95
DPB3YBR278W TSR1Q07381 788 aaKnown RBP2.86□□□□□ -1.95
DPB3YBR278W GAT3Q07928 141 aa2.86□□□□□ -1.95
DPB3YBR278W APC5Q08683 685 aa2.86□□□□□ -1.95
DPB3YBR278W YDR262WQ12331 272 aa2.86□□□□□ -1.95
DPB3YBR278W EAF3Q12432 401 aa2.86□□□□□ -1.95
DPB3YBR278W PFK27Q12471 397 aaPredicted RBP2.86□□□□□ -1.95
DPB3YBR278W MXR2P25566 168 aa2.85□□□□□ -1.95
DPB3YBR278W CIN8P27895 1000 aa2.85□□□□□ -1.95
DPB3YBR278W POP5P28005 173 aa2.85□□□□□ -1.95
DPB3YBR278W RAD5P32849 1169 aaPredicted RBP2.85□□□□□ -1.95
DPB3YBR278W PEX32P38292 413 aa2.85□□□□□ -1.95
DPB3YBR278W ATG7P38862 630 aa2.85□□□□□ -1.95
DPB3YBR278W MTM1P53320 366 aa2.85□□□□□ -1.95
DPB3YBR278W DBP6P53734 629 aaKnown RBP2.85□□□□□ -1.95
DPB3YBR278W CAB5Q03941 241 aa2.85□□□□□ -1.95
DPB3YBR278W RRN11Q04712 507 aa2.85□□□□□ -1.95
DPB3YBR278W NAT4Q04751 285 aa2.85□□□□□ -1.95
DPB3YBR278W PBA1Q05778 276 aa2.85□□□□□ -1.95
DPB3YBR278W MRPL35Q06678 367 aa2.85□□□□□ -1.95
DPB3YBR278W LOT6Q07923 191 aa2.85□□□□□ -1.95
DPB3YBR278W YOL075CQ08234 1294 aa2.85□□□□□ -1.95
DPB3YBR278W ERV2Q12284 196 aa2.85□□□□□ -1.95
DPB3YBR278W PCL9Q12477 304 aa2.85□□□□□ -1.95
DPB3YBR278W MEX67Q99257 599 aaKnown RBP2.85□□□□□ -1.95
DPB3YBR278W YOR338WQ99326 363 aa2.85□□□□□ -1.95
DPB3YBR278W HHF1P02309 103 aaKnown RBP2.84□□□□□ -1.95
DPB3YBR278W PIS1P06197 220 aaKnown RBP2.84□□□□□ -1.95
DPB3YBR278W MSS116P15424 664 aaKnown RBP2.84□□□□□ -1.95
DPB3YBR278W YPS1P32329 569 aa2.84□□□□□ -1.95
DPB3YBR278W PPQ1P32945 549 aa2.84□□□□□ -1.95
DPB3YBR278W SDH3P33421 198 aa2.84□□□□□ -1.95
DPB3YBR278W IST2P38250 946 aa2.84□□□□□ -1.95
DPB3YBR278W YHK8P38776 514 aa2.84□□□□□ -1.95
DPB3YBR278W YHR182WP38870 785 aa2.84□□□□□ -1.95
DPB3YBR278W KRE9P39005 276 aa2.84□□□□□ -1.95
DPB3YBR278W BTT1P40314 149 aaPredicted RBP2.84□□□□□ -1.95
DPB3YBR278W GCD14P46959 383 aaPredicted RBP2.84□□□□□ -1.95
DPB3YBR278W RIB4P50861 169 aaPredicted RBP2.84□□□□□ -1.95
DPB3YBR278W LST7P53237 242 aa2.84□□□□□ -1.95
DPB3YBR278W ALF1P53904 254 aa2.84□□□□□ -1.95
DPB3YBR278W EGD1Q02642 157 aaKnown RBP2.84□□□□□ -1.95
DPB3YBR278W TDA1Q03533 586 aa2.84□□□□□ -1.95
DPB3YBR278W RRG8Q06109 277 aa2.84□□□□□ -1.95
DPB3YBR278W RRP36Q12481 300 aaPredicted RBP2.84□□□□□ -1.95
DPB3YBR278W YMR230W-AQ3E7B5 62 aa2.84□□□□□ -1.95
DPB3YBR278W YIL002W-AQ3E7Z5 69 aa2.84□□□□□ -1.95
DPB3YBR278W DET1Q99288 334 aaKnown RBP2.84□□□□□ -1.95
DPB3YBR278W RAD1P06777 1100 aa2.83□□□□□ -1.96
DPB3YBR278W RPS8AP0CX39 200 aaKnown RBP2.83□□□□□ -1.96
DPB3YBR278W RPS8BP0CX40 200 aaKnown RBP2.83□□□□□ -1.96
DPB3YBR278W NAM2P11325 894 aa2.83□□□□□ -1.96
DPB3YBR278W ARF2P19146 181 aaKnown RBP2.83□□□□□ -1.96
DPB3YBR278W UTR1P21373 530 aa2.83□□□□□ -1.96
DPB3YBR278W FUN26P31381 517 aa2.83□□□□□ -1.96
DPB3YBR278W BUD2P33314 1104 aa2.83□□□□□ -1.96
DPB3YBR278W PAD1P33751 242 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
DPB3YBR278W SPO23P33757 523 aa2.83□□□□□ -1.96
DPB3YBR278W YBL059WP34224 193 aa2.83□□□□□ -1.96
DPB3YBR278W MYO3P36006 1272 aa2.83□□□□□ -1.96
DPB3YBR278W EBP2P36049 427 aaKnown RBP2.83□□□□□ -1.96
DPB3YBR278W RFS1P38234 210 aaKnown RBP2.83□□□□□ -1.96
DPB3YBR278W NDT80P38830 627 aa2.83□□□□□ -1.96
DPB3YBR278W YHR131CP38835 850 aa2.83□□□□□ -1.96
DPB3YBR278W PTH1P38876 190 aaKnown RBP2.83□□□□□ -1.96
DPB3YBR278W YHR218WP38899 603 aa2.83□□□□□ -1.96
DPB3YBR278W KEG1P43614 200 aa2.83□□□□□ -1.96
DPB3YBR278W CTK3P46963 296 aaPredicted RBP2.83□□□□□ -1.96
DPB3YBR278W TRF5P48561 642 aaKnown RBP2.83□□□□□ -1.96
DPB3YBR278W SCS3P53012 380 aa2.83□□□□□ -1.96
DPB3YBR278W YGL260WP53056 76 aa2.83□□□□□ -1.96
DPB3YBR278W CWC25P53854 179 aaKnown RBP2.83□□□□□ -1.96
DPB3YBR278W MTQ1P53944 314 aa2.83□□□□□ -1.96
DPB3YBR278W ELP3Q02908 557 aaKnown RBP2.83□□□□□ -1.96
DPB3YBR278W YMR102CQ03177 834 aa2.83□□□□□ -1.96
DPB3YBR278W CSM3Q04659 317 aa2.83□□□□□ -1.96
DPB3YBR278W RTN1Q04947 295 aaKnown RBP2.83□□□□□ -1.96
DPB3YBR278W BUR2Q05949 395 aa2.83□□□□□ -1.96
DPB3YBR278W YLH47Q06493 454 aa2.83□□□□□ -1.96
DPB3YBR278W VAC14Q06708 880 aa2.83□□□□□ -1.96
DPB3YBR278W YDL114WQ07530 308 aa2.83□□□□□ -1.96
DPB3YBR278W SMC5Q08204 1093 aa2.83□□□□□ -1.96
DPB3YBR278W YGK3Q12222 375 aaPredicted RBP2.83□□□□□ -1.96
DPB3YBR278W HTZ1Q12692 134 aaKnown RBP2.83□□□□□ -1.96
DPB3YBR278W GAL7P08431 366 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms